RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 SNRPEP62304 92 aaKnown RBP9.13□□□□□ -0.95
SUPT16H-208ENST00000557652 PKHD1P08F94 4074 aa9.12□□□□□ -0.95
SUPT16H-208ENST00000557652 TOMM7Q9P0U1 55 aa9.12□□□□□ -0.95
SUPT16H-208ENST00000557652 LINC00474Q9P2X8 69 aa9.12□□□□□ -0.95
SUPT16H-208ENST00000557652 TLX1NBP0CAT3 122 aa9.11□□□□□ -0.95
SUPT16H-208ENST00000557652 KRTDAPP60985 99 aa9.11□□□□□ -0.95
SUPT16H-208ENST00000557652 SDIM1Q6ZPB5 146 aa9.11□□□□□ -0.95
SUPT16H-208ENST00000557652 Q6ZRU5 148 aa9.11□□□□□ -0.95
SUPT16H-208ENST00000557652 LOC107984640A0A0U1RRK4 108 aa9.1□□□□□ -0.95
SUPT16H-208ENST00000557652 CDK2AP2O75956 126 aa9.1□□□□□ -0.95
SUPT16H-208ENST00000557652 Q6ZSA8 131 aa9.1□□□□□ -0.95
SUPT16H-208ENST00000557652 LINC00526Q96FQ7 95 aa9.1□□□□□ -0.95
SUPT16H-208ENST00000557652 KRTAP10-1P60331 282 aa9.09□□□□□ -0.95
SUPT16H-208ENST00000557652 PLEKHB2Q96CS7 222 aa9.09□□□□□ -0.95
SUPT16H-208ENST00000557652 CIRBPQ14011 172 aaKnown RBP9.08□□□□□ -0.96
SUPT16H-208ENST00000557652 UNQ6190/PRO20217Q6UXQ8 127 aa9.08□□□□□ -0.96
SUPT16H-208ENST00000557652 NMUP48645 174 aa9.07□□□□□ -0.96
SUPT16H-208ENST00000557652 C6orf48Q9UBA6 75 aa9.07□□□□□ -0.96
SUPT16H-208ENST00000557652 DNAH5Q8TE73 4624 aa9.06□□□□□ -0.96
SUPT16H-208ENST00000557652 LINC00587B1AMM8 73 aa9.06□□□□□ -0.96
SUPT16H-208ENST00000557652 NDUFC2-KCTD14E9PQ53 114 aa9.06□□□□□ -0.96
SUPT16H-208ENST00000557652 LEPROTO15243 131 aa9.06□□□□□ -0.96
SUPT16H-208ENST00000557652 HERV-K104P63124 156 aa9.06□□□□□ -0.96
SUPT16H-208ENST00000557652 COX17Q14061 63 aa9.06□□□□□ -0.96
SUPT16H-208ENST00000557652 C2orf82Q6UX34 121 aa9.06□□□□□ -0.96
SUPT16H-208ENST00000557652 PMCHL2Q9BQD1 86 aa9.06□□□□□ -0.96
SUPT16H-208ENST00000557652 E9PLD3 99 aa9.05□□□□□ -0.96
SUPT16H-208ENST00000557652 FUSP35637 526 aaKnown RBP eCLIP9.05□□□□□ -0.96
SUPT16H-208ENST00000557652 C10orf25Q5T742 122 aa9.05□□□□□ -0.96
SUPT16H-208ENST00000557652 MYMXA0A1B0GTQ4 84 aa9.04□□□□□ -0.96
SUPT16H-208ENST00000557652 PTTG1IPP53801 180 aa9.04□□□□□ -0.96
SUPT16H-208ENST00000557652 ZNF625Q96I27 306 aaPredicted RBP9.04□□□□□ -0.96
SUPT16H-208ENST00000557652 J3QQQ9 107 aa9.03□□□□□ -0.96
SUPT16H-208ENST00000557652 LINC01620Q4KN68 170 aa9.03□□□□□ -0.96
SUPT16H-208ENST00000557652 SPACA4Q8TDM5 124 aa9.03□□□□□ -0.96
SUPT16H-208ENST00000557652 EPPK1P58107 5090 aaKnown RBP9.03□□□□□ -0.96
SUPT16H-208ENST00000557652 DYNC1H1Q14204 4646 aaKnown RBP9.03□□□□□ -0.96
SUPT16H-208ENST00000557652 LGALS3P17931 250 aaKnown RBP9.02□□□□□ -0.97
SUPT16H-208ENST00000557652 NDUFA12Q9UI09 145 aa9.02□□□□□ -0.97
SUPT16H-208ENST00000557652 A0A096LNI7 61 aa9.01□□□□□ -0.97
SUPT16H-208ENST00000557652 RPL18AQ02543 176 aaKnown RBP9.01□□□□□ -0.97
SUPT16H-208ENST00000557652 LRP1BQ9NZR2 4599 aa9.01□□□□□ -0.97
SUPT16H-208ENST00000557652 HSBP1L1C9JCN9 74 aa9□□□□□ -0.97
SUPT16H-208ENST00000557652 ERG28Q9UKR5 140 aa9□□□□□ -0.97
SUPT16H-208ENST00000557652 GAGE2BQ13066 116 aa8.99□□□□□ -0.97
SUPT16H-208ENST00000557652 Q6ZRP5 223 aa8.99□□□□□ -0.97
SUPT16H-208ENST00000557652 PLAC8Q9NZF1 115 aa8.99□□□□□ -0.97
SUPT16H-208ENST00000557652 FAM30AQ9NZY2 134 aa8.99□□□□□ -0.97
SUPT16H-208ENST00000557652 TMA7Q9Y2S6 64 aaKnown RBP8.99□□□□□ -0.97
SUPT16H-208ENST00000557652 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.99□□□□□ -0.97
SUPT16H-208ENST00000557652 IGKV2-24A0A0C4DH68 120 aa8.98□□□□□ -0.97
SUPT16H-208ENST00000557652 EPM2AB3EWF7 344 aa8.98□□□□□ -0.97
SUPT16H-208ENST00000557652 SCGB1D1O95968 90 aa8.98□□□□□ -0.97
SUPT16H-208ENST00000557652 XGP55808 180 aa8.98□□□□□ -0.97
SUPT16H-208ENST00000557652 MAJINQ3KP22 176 aa8.98□□□□□ -0.97
SUPT16H-208ENST00000557652 DPH3Q96FX2 82 aa8.98□□□□□ -0.97
SUPT16H-208ENST00000557652 C9orf116Q5BN46 136 aaPredicted RBP8.97□□□□□ -0.97
SUPT16H-208ENST00000557652 SCXQ7RTU7 201 aa8.97□□□□□ -0.97
SUPT16H-208ENST00000557652 STPG4Q8N801 248 aa8.97□□□□□ -0.97
SUPT16H-208ENST00000557652 BIRC6Q9NR09 4857 aa8.96□□□□□ -0.97
SUPT16H-208ENST00000557652 A0A087WYN8 130 aa8.96□□□□□ -0.98
SUPT16H-208ENST00000557652 TSPEAR-AS2P59090 65 aa8.96□□□□□ -0.98
SUPT16H-208ENST00000557652 JOSD1Q15040 202 aaPredicted RBP8.96□□□□□ -0.98
SUPT16H-208ENST00000557652 CIRBP-AS1Q8TBR5 109 aa8.96□□□□□ -0.98
SUPT16H-208ENST00000557652 CHTF8P0CG12 524 aa8.95□□□□□ -0.98
SUPT16H-208ENST00000557652 GAGE2EQ4V326 116 aa8.95□□□□□ -0.98
SUPT16H-208ENST00000557652 MEIG1Q5JSS6 88 aa8.95□□□□□ -0.98
SUPT16H-208ENST00000557652 GAGE2DQ9UEU5 116 aa8.95□□□□□ -0.98
SUPT16H-208ENST00000557652 PLA2G2DQ9UNK4 145 aa8.95□□□□□ -0.98
SUPT16H-208ENST00000557652 DNAH8Q96JB1 4490 aa8.95□□□□□ -0.98
SUPT16H-208ENST00000557652 TIMM17BO60830 172 aa8.94□□□□□ -0.98
SUPT16H-208ENST00000557652 ATOH7Q8N100 152 aa8.94□□□□□ -0.98
SUPT16H-208ENST00000557652 PANO1I0J062 215 aa8.93□□□□□ -0.98
SUPT16H-208ENST00000557652 PFN2P35080 140 aa8.93□□□□□ -0.98
SUPT16H-208ENST00000557652 LINC00158P58513 81 aa8.93□□□□□ -0.98
SUPT16H-208ENST00000557652 IGKV2D-26A0A0A0MRZ7 120 aa8.92□□□□□ -0.98
SUPT16H-208ENST00000557652 ZNF815PA8K554 130 aa8.92□□□□□ -0.98
SUPT16H-208ENST00000557652 ANKRD39Q53RE8 183 aa8.92□□□□□ -0.98
SUPT16H-208ENST00000557652 TP73-AS1Q9UF72 201 aa8.92□□□□□ -0.98
SUPT16H-208ENST00000557652 A0A0J9YXY3 114 aa8.91□□□□□ -0.98
SUPT16H-208ENST00000557652 C9orf129Q5T035 196 aaKnown RBP8.91□□□□□ -0.98
SUPT16H-208ENST00000557652 C7orf33Q8WU49 177 aa8.91□□□□□ -0.98
SUPT16H-208ENST00000557652 SND1-IT1Q9HBX3 110 aa8.91□□□□□ -0.98
SUPT16H-208ENST00000557652 LOC107984156A0A0G2JMH3 177 aa8.9□□□□□ -0.98
SUPT16H-208ENST00000557652 SMIM13P0DJ93 91 aa8.9□□□□□ -0.98
SUPT16H-208ENST00000557652 RPL24P83731 157 aaKnown RBP8.9□□□□□ -0.98
SUPT16H-208ENST00000557652 ARL17AQ8IVW1 177 aa8.9□□□□□ -0.98
SUPT16H-208ENST00000557652 XAGE1AQ9HD64 81 aa8.9□□□□□ -0.98
SUPT16H-208ENST00000557652 APOBP04114 4563 aaKnown RBP8.89□□□□□ -0.99
SUPT16H-208ENST00000557652 IGLV5-37A0A075B6J1 123 aa8.89□□□□□ -0.99
SUPT16H-208ENST00000557652 Q6ZVH6 145 aa8.89□□□□□ -0.99
SUPT16H-208ENST00000557652 Q8N1X5 172 aa8.89□□□□□ -0.99
SUPT16H-208ENST00000557652 COPS9Q8WXC6 57 aa8.89□□□□□ -0.99
SUPT16H-208ENST00000557652 A0A1W2PNN7 141 aa8.88□□□□□ -0.99
SUPT16H-208ENST00000557652 TMEM238C9JI98 176 aa8.88□□□□□ -0.99
SUPT16H-208ENST00000557652 FAM229AH3BQW9 127 aa8.88□□□□□ -0.99
SUPT16H-208ENST00000557652 LBHQ53QV2 105 aaPredicted RBP8.88□□□□□ -0.99
SUPT16H-208ENST00000557652 SCGB1D4Q6XE38 83 aa8.88□□□□□ -0.99
SUPT16H-208ENST00000557652 MIR7-3HGQ8N6C7 128 aa8.88□□□□□ -0.99
SUPT16H-208ENST00000557652 VAMP8Q9BV40 100 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms