RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 PLEKHB2Q96CS7 222 aa12.54□□□□□ -0.4
PSEN1-207ENST00000553599 LEPROTO15243 131 aa12.53□□□□□ -0.4
PSEN1-207ENST00000553599 SCGB1D1O95968 90 aa12.53□□□□□ -0.4
PSEN1-207ENST00000553599 Q6ZRU5 148 aa12.53□□□□□ -0.4
PSEN1-207ENST00000553599 HECTD4Q9Y4D8 3996 aa12.52□□□□□ -0.4
PSEN1-207ENST00000553599 E9PLD3 99 aa12.52□□□□□ -0.41
PSEN1-207ENST00000553599 GCSHP23434 173 aa12.52□□□□□ -0.41
PSEN1-207ENST00000553599 C2orf82Q6UX34 121 aa12.51□□□□□ -0.41
PSEN1-207ENST00000553599 UNQ6190/PRO20217Q6UXQ8 127 aa12.51□□□□□ -0.41
PSEN1-207ENST00000553599 C16orf90A8MZG2 172 aa12.5□□□□□ -0.41
PSEN1-207ENST00000553599 J3QQQ9 107 aa12.49□□□□□ -0.41
PSEN1-207ENST00000553599 JOSD1Q15040 202 aaPredicted RBP12.49□□□□□ -0.41
PSEN1-207ENST00000553599 C10orf25Q5T742 122 aa12.49□□□□□ -0.41
PSEN1-207ENST00000553599 STPG4Q8N801 248 aa12.49□□□□□ -0.41
PSEN1-207ENST00000553599 C6orf48Q9UBA6 75 aa12.49□□□□□ -0.41
PSEN1-207ENST00000553599 HSBP1L1C9JCN9 74 aa12.48□□□□□ -0.41
PSEN1-207ENST00000553599 FUSP35637 526 aaKnown RBP eCLIP12.48□□□□□ -0.41
PSEN1-207ENST00000553599 NMUP48645 174 aa12.48□□□□□ -0.41
PSEN1-207ENST00000553599 ATOH7Q8N100 152 aa12.48□□□□□ -0.41
PSEN1-207ENST00000553599 ZNF625Q96I27 306 aaPredicted RBP12.48□□□□□ -0.41
PSEN1-207ENST00000553599 LGALS3P17931 250 aaKnown RBP12.47□□□□□ -0.41
PSEN1-207ENST00000553599 LOC107984640A0A0U1RRK4 108 aa12.46□□□□□ -0.41
PSEN1-207ENST00000553599 MYMXA0A1B0GTQ4 84 aa12.46□□□□□ -0.41
PSEN1-207ENST00000553599 TLX1NBP0CAT3 122 aa12.46□□□□□ -0.41
PSEN1-207ENST00000553599 HERV-K104P63124 156 aa12.46□□□□□ -0.41
PSEN1-207ENST00000553599 SDIM1Q6ZPB5 146 aa12.46□□□□□ -0.41
PSEN1-207ENST00000553599 NDUFA12Q9UI09 145 aa12.46□□□□□ -0.41
PSEN1-207ENST00000553599 TSPEAR-AS2P59090 65 aa12.44□□□□□ -0.42
PSEN1-207ENST00000553599 LINC00587B1AMM8 73 aa12.43□□□□□ -0.42
PSEN1-207ENST00000553599 COX17Q14061 63 aa12.43□□□□□ -0.42
PSEN1-207ENST00000553599 LINC01620Q4KN68 170 aa12.43□□□□□ -0.42
PSEN1-207ENST00000553599 NDUFC2-KCTD14E9PQ53 114 aa12.42□□□□□ -0.42
PSEN1-207ENST00000553599 KRTAP10-1P60331 282 aa12.42□□□□□ -0.42
PSEN1-207ENST00000553599 ANKRD39Q53RE8 183 aa12.42□□□□□ -0.42
PSEN1-207ENST00000553599 LINC00474Q9P2X8 69 aa12.42□□□□□ -0.42
PSEN1-207ENST00000553599 DNAH5Q8TE73 4624 aa12.42□□□□□ -0.42
PSEN1-207ENST00000553599 PKHD1P08F94 4074 aa12.41□□□□□ -0.42
PSEN1-207ENST00000553599 IGKV2D-26A0A0A0MRZ7 120 aa12.4□□□□□ -0.42
PSEN1-207ENST00000553599 C9orf116Q5BN46 136 aaPredicted RBP12.4□□□□□ -0.42
PSEN1-207ENST00000553599 PYY3Q5JQD4 70 aa12.4□□□□□ -0.42
PSEN1-207ENST00000553599 ERG28Q9UKR5 140 aa12.4□□□□□ -0.42
PSEN1-207ENST00000553599 MAJINQ3KP22 176 aa12.39□□□□□ -0.43
PSEN1-207ENST00000553599 PTTG1IPP53801 180 aa12.38□□□□□ -0.43
PSEN1-207ENST00000553599 RPL18AQ02543 176 aaKnown RBP12.38□□□□□ -0.43
PSEN1-207ENST00000553599 Q6ZSA8 131 aa12.38□□□□□ -0.43
PSEN1-207ENST00000553599 CIRBPQ14011 172 aaKnown RBP12.37□□□□□ -0.43
PSEN1-207ENST00000553599 Q6ZRP5 223 aa12.37□□□□□ -0.43
PSEN1-207ENST00000553599 A0A096LNI7 61 aa12.36□□□□□ -0.43
PSEN1-207ENST00000553599 ZNF815PA8K554 130 aa12.36□□□□□ -0.43
PSEN1-207ENST00000553599 GAGE2BQ13066 116 aa12.36□□□□□ -0.43
PSEN1-207ENST00000553599 MEIG1Q5JSS6 88 aa12.36□□□□□ -0.43
PSEN1-207ENST00000553599 VAMP8Q9BV40 100 aa12.36□□□□□ -0.43
PSEN1-207ENST00000553599 PFN2P35080 140 aa12.35□□□□□ -0.43
PSEN1-207ENST00000553599 EPPK1P58107 5090 aaKnown RBP12.35□□□□□ -0.43
PSEN1-207ENST00000553599 IGKV2-24A0A0C4DH68 120 aa12.34□□□□□ -0.43
PSEN1-207ENST00000553599 SPACA4Q8TDM5 124 aa12.34□□□□□ -0.43
PSEN1-207ENST00000553599 DYNC1H1Q14204 4646 aaKnown RBP12.33□□□□□ -0.44
PSEN1-207ENST00000553599 A0A0J9YXY3 114 aa12.33□□□□□ -0.44
PSEN1-207ENST00000553599 LINC00158P58513 81 aa12.33□□□□□ -0.44
PSEN1-207ENST00000553599 GAGE2EQ4V326 116 aa12.33□□□□□ -0.44
PSEN1-207ENST00000553599 GAGE2DQ9UEU5 116 aa12.33□□□□□ -0.44
PSEN1-207ENST00000553599 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.33□□□□□ -0.44
PSEN1-207ENST00000553599 FAM30AQ9NZY2 134 aa12.32□□□□□ -0.44
PSEN1-207ENST00000553599 LOC105371267A0A1B0GV96 52 aa12.31□□□□□ -0.44
PSEN1-207ENST00000553599 TIMM17BO60830 172 aa12.31□□□□□ -0.44
PSEN1-207ENST00000553599 CHTF8P0CG12 524 aa12.31□□□□□ -0.44
PSEN1-207ENST00000553599 SMIM13P0DJ93 91 aa12.31□□□□□ -0.44
PSEN1-207ENST00000553599 SPATA45Q537H7 98 aa12.31□□□□□ -0.44
PSEN1-207ENST00000553599 PCP2Q8IVA1 136 aa12.31□□□□□ -0.44
PSEN1-207ENST00000553599 DPH3Q96FX2 82 aa12.31□□□□□ -0.44
PSEN1-207ENST00000553599 TTTY13Q9BZ97 58 aa12.31□□□□□ -0.44
PSEN1-207ENST00000553599 PAM16Q9Y3D7 125 aa12.31□□□□□ -0.44
PSEN1-207ENST00000553599 LRP1BQ9NZR2 4599 aa12.3□□□□□ -0.44
PSEN1-207ENST00000553599 CDK2AP2O75956 126 aa12.3□□□□□ -0.44
PSEN1-207ENST00000553599 PANO1I0J062 215 aa12.29□□□□□ -0.44
PSEN1-207ENST00000553599 SCGB1D4Q6XE38 83 aa12.29□□□□□ -0.44
PSEN1-207ENST00000553599 SMIM6P0DI80 62 aa12.28□□□□□ -0.44
PSEN1-207ENST00000553599 COX8AP10176 69 aa12.28□□□□□ -0.44
PSEN1-207ENST00000553599 S100A12P80511 92 aa12.28□□□□□ -0.44
PSEN1-207ENST00000553599 SND1-IT1Q9HBX3 110 aa12.28□□□□□ -0.44
PSEN1-207ENST00000553599 DLEU1O43261 78 aa12.27□□□□□ -0.45
PSEN1-207ENST00000553599 C9orf129Q5T035 196 aaKnown RBP12.27□□□□□ -0.45
PSEN1-207ENST00000553599 BOD1L2Q8IYS8 172 aa12.27□□□□□ -0.45
PSEN1-207ENST00000553599 MIR7-3HGQ8N6C7 128 aa12.27□□□□□ -0.45
PSEN1-207ENST00000553599 XAGE1AQ9HD64 81 aa12.27□□□□□ -0.45
PSEN1-207ENST00000553599 PLAC8Q9NZF1 115 aa12.27□□□□□ -0.45
PSEN1-207ENST00000553599 A0A087WYN8 130 aa12.26□□□□□ -0.45
PSEN1-207ENST00000553599 A0A0U1RRA0 63 aa12.26□□□□□ -0.45
PSEN1-207ENST00000553599 TMEM238C9JI98 176 aa12.26□□□□□ -0.45
PSEN1-207ENST00000553599 DNAH8Q96JB1 4490 aa12.25□□□□□ -0.45
PSEN1-207ENST00000553599 EPM2AB3EWF7 344 aa12.25□□□□□ -0.45
PSEN1-207ENST00000553599 SCXQ7RTU7 201 aa12.25□□□□□ -0.45
PSEN1-207ENST00000553599 CIRBP-AS1Q8TBR5 109 aa12.25□□□□□ -0.45
PSEN1-207ENST00000553599 PLA2G2DQ9UNK4 145 aa12.25□□□□□ -0.45
PSEN1-207ENST00000553599 LOC107984156A0A0G2JMH3 177 aa12.24□□□□□ -0.45
PSEN1-207ENST00000553599 ARL17AQ8IVW1 177 aa12.24□□□□□ -0.45
PSEN1-207ENST00000553599 LITAFQ99732 161 aa12.24□□□□□ -0.45
PSEN1-207ENST00000553599 XGP55808 180 aa12.23□□□□□ -0.45
PSEN1-207ENST00000553599 Q6ZVH6 145 aa12.23□□□□□ -0.45
PSEN1-207ENST00000553599 ADAMTSL4-AS1Q5T5F5 129 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms