RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 CHTOPQ9Y3Y2 248 aaKnown RBP9.22□□□□□ -0.93
DDX54-203ENST00000546869 ZNF22P17026 224 aaPredicted RBP9.21□□□□□ -0.94
DDX54-203ENST00000546869 CXCL5P42830 114 aa9.21□□□□□ -0.94
DDX54-203ENST00000546869 C10orf25Q5T742 122 aa9.21□□□□□ -0.94
DDX54-203ENST00000546869 A0A096LNI7 61 aa9.2□□□□□ -0.94
DDX54-203ENST00000546869 IGLV5-39A0A0G2JS06 123 aa9.2□□□□□ -0.94
DDX54-203ENST00000546869 F8VRH5 84 aa9.2□□□□□ -0.94
DDX54-203ENST00000546869 CKS1BP61024 79 aa9.2□□□□□ -0.94
DDX54-203ENST00000546869 C6orf48Q9UBA6 75 aa9.2□□□□□ -0.94
DDX54-203ENST00000546869 C11orf86A6NJI1 115 aa9.19□□□□□ -0.94
DDX54-203ENST00000546869 SMR3BP02814 79 aaPredicted RBP9.19□□□□□ -0.94
DDX54-203ENST00000546869 PTTG1IPP53801 180 aa9.19□□□□□ -0.94
DDX54-203ENST00000546869 HAMPP81172 84 aa9.19□□□□□ -0.94
DDX54-203ENST00000546869 COX7B2Q8TF08 81 aa9.19□□□□□ -0.94
DDX54-203ENST00000546869 PLAC8Q9NZF1 115 aa9.19□□□□□ -0.94
DDX54-203ENST00000546869 TOMM7Q9P0U1 55 aa9.19□□□□□ -0.94
DDX54-203ENST00000546869 A0A087WYN8 130 aa9.18□□□□□ -0.94
DDX54-203ENST00000546869 EPM2AB3EWF7 344 aa9.18□□□□□ -0.94
DDX54-203ENST00000546869 FAM229AH3BQW9 127 aa9.18□□□□□ -0.94
DDX54-203ENST00000546869 CHTF8P0CG12 524 aa9.18□□□□□ -0.94
DDX54-203ENST00000546869 C2orf82Q6UX34 121 aa9.18□□□□□ -0.94
DDX54-203ENST00000546869 DPH3Q96FX2 82 aa9.18□□□□□ -0.94
DDX54-203ENST00000546869 SPINK8P0C7L1 97 aa9.17□□□□□ -0.94
DDX54-203ENST00000546869 ODF1Q14990 250 aa9.17□□□□□ -0.94
DDX54-203ENST00000546869 MAJINQ3KP22 176 aa9.17□□□□□ -0.94
DDX54-203ENST00000546869 IGKV2-24A0A0C4DH68 120 aa9.16□□□□□ -0.94
DDX54-203ENST00000546869 FABP4P15090 132 aa9.16□□□□□ -0.94
DDX54-203ENST00000546869 TMEM170BQ5T4T1 132 aa9.16□□□□□ -0.94
DDX54-203ENST00000546869 NDUFC2-KCTD14E9PQ53 114 aa9.15□□□□□ -0.94
DDX54-203ENST00000546869 GAGE2BQ13066 116 aa9.15□□□□□ -0.94
DDX54-203ENST00000546869 Q5VSD8 79 aa9.15□□□□□ -0.94
DDX54-203ENST00000546869 LINC00528Q8N1L1 170 aa9.15□□□□□ -0.94
DDX54-203ENST00000546869 STPG4Q8N801 248 aa9.15□□□□□ -0.94
DDX54-203ENST00000546869 MAP1LC3CQ9BXW4 147 aa9.15□□□□□ -0.94
DDX54-203ENST00000546869 KRTAP4-5Q9BYR2 181 aa9.15□□□□□ -0.94
DDX54-203ENST00000546869 TMEM223A0PJW6 202 aa9.14□□□□□ -0.95
DDX54-203ENST00000546869 RPL18AQ02543 176 aaKnown RBP9.14□□□□□ -0.95
DDX54-203ENST00000546869 Q6ZRP5 223 aa9.14□□□□□ -0.95
DDX54-203ENST00000546869 PLA2G1BP04054 148 aaKnown RBP9.13□□□□□ -0.95
DDX54-203ENST00000546869 PLNP26678 52 aa9.13□□□□□ -0.95
DDX54-203ENST00000546869 SFTA2Q6UW10 78 aa9.13□□□□□ -0.95
DDX54-203ENST00000546869 C9orf116Q5BN46 136 aaPredicted RBP9.12□□□□□ -0.95
DDX54-203ENST00000546869 H0Y8G0 127 aa9.1□□□□□ -0.95
DDX54-203ENST00000546869 SYS1-DBNDD2H3BUS1 97 aa9.1□□□□□ -0.95
DDX54-203ENST00000546869 DPM2O94777 84 aa9.1□□□□□ -0.95
DDX54-203ENST00000546869 A0A1W2PNN7 141 aa9.09□□□□□ -0.95
DDX54-203ENST00000546869 IGKCP01834 107 aa9.09□□□□□ -0.95
DDX54-203ENST00000546869 KRTAP10-4P60372 401 aaPredicted RBP9.09□□□□□ -0.95
DDX54-203ENST00000546869 GAGE2EQ4V326 116 aa9.09□□□□□ -0.95
DDX54-203ENST00000546869 PET117Q6UWS5 81 aa9.09□□□□□ -0.95
DDX54-203ENST00000546869 ZNF625Q96I27 306 aaPredicted RBP9.09□□□□□ -0.95
DDX54-203ENST00000546869 GAGE2DQ9UEU5 116 aa9.09□□□□□ -0.95
DDX54-203ENST00000546869 FAT1Q14517 4588 aa9.09□□□□□ -0.96
DDX54-203ENST00000546869 COX17Q14061 63 aa9.08□□□□□ -0.96
DDX54-203ENST00000546869 C7orf33Q8WU49 177 aa9.08□□□□□ -0.96
DDX54-203ENST00000546869 C9orf129Q5T035 196 aaKnown RBP9.07□□□□□ -0.96
DDX54-203ENST00000546869 LINC01545Q5VT33 79 aa9.07□□□□□ -0.96
DDX54-203ENST00000546869 RPL37AP61513 92 aaKnown RBP9.06□□□□□ -0.96
DDX54-203ENST00000546869 C3orf79P0CE67 100 aa9.05□□□□□ -0.96
DDX54-203ENST00000546869 LEPROTO15243 131 aa9.04□□□□□ -0.96
DDX54-203ENST00000546869 INAFM2P0DMQ5 153 aa9.04□□□□□ -0.96
DDX54-203ENST00000546869 HERVK_113P61574 105 aa9.04□□□□□ -0.96
DDX54-203ENST00000546869 PLEKHB2Q96CS7 222 aa9.04□□□□□ -0.96
DDX54-203ENST00000546869 PMCHL2Q9BQD1 86 aa9.04□□□□□ -0.96
DDX54-203ENST00000546869 ERG28Q9UKR5 140 aa9.04□□□□□ -0.96
DDX54-203ENST00000546869 SRRM2Q9UQ35 2752 aaKnown RBP9.03□□□□□ -0.96
DDX54-203ENST00000546869 HERV-K104P63124 156 aa9.03□□□□□ -0.96
DDX54-203ENST00000546869 KRTAP7-1Q8IUC3 87 aa9.03□□□□□ -0.96
DDX54-203ENST00000546869 PLA2G2DQ9UNK4 145 aa9.03□□□□□ -0.96
DDX54-203ENST00000546869 VPS13BQ7Z7G8 4022 aa9.03□□□□□ -0.96
DDX54-203ENST00000546869 FAM168BA1KXE4 195 aa9.02□□□□□ -0.97
DDX54-203ENST00000546869 LINC00587B1AMM8 73 aa9.02□□□□□ -0.97
DDX54-203ENST00000546869 S100A6P06703 90 aa9.02□□□□□ -0.97
DDX54-203ENST00000546869 NMUP48645 174 aa9.02□□□□□ -0.97
DDX54-203ENST00000546869 AKR1D1P51857 326 aa9.02□□□□□ -0.97
DDX54-203ENST00000546869 HIST3H2BBQ8N257 126 aa9.02□□□□□ -0.97
DDX54-203ENST00000546869 ABCA13Q86UQ4 5058 aa9.02□□□□□ -0.97
DDX54-203ENST00000546869 MYMXA0A1B0GTQ4 84 aa9.01□□□□□ -0.97
DDX54-203ENST00000546869 E9PLD3 99 aa9.01□□□□□ -0.97
DDX54-203ENST00000546869 PFN2P35080 140 aa9.01□□□□□ -0.97
DDX54-203ENST00000546869 XAGE1AQ9HD64 81 aa9.01□□□□□ -0.97
DDX54-203ENST00000546869 NDUFA12Q9UI09 145 aa9.01□□□□□ -0.97
DDX54-203ENST00000546869 J3QQQ9 107 aa9□□□□□ -0.97
DDX54-203ENST00000546869 KRTDAPP60985 99 aa9□□□□□ -0.97
DDX54-203ENST00000546869 TP73-AS1Q9UF72 201 aa9□□□□□ -0.97
DDX54-203ENST00000546869 PCLOQ9Y6V0 5065 aa8.99□□□□□ -0.97
DDX54-203ENST00000546869 C20orf202A1L168 122 aa8.99□□□□□ -0.97
DDX54-203ENST00000546869 S100A2P29034 98 aa8.99□□□□□ -0.97
DDX54-203ENST00000546869 PHF5AQ7RTV0 110 aaKnown RBP8.99□□□□□ -0.97
DDX54-203ENST00000546869 FAM19A5Q7Z5A7 132 aaPredicted RBP8.99□□□□□ -0.97
DDX54-203ENST00000546869 HIST1H2BLQ99880 126 aa8.99□□□□□ -0.97
DDX54-203ENST00000546869 IGLV5-37A0A075B6J1 123 aa8.98□□□□□ -0.97
DDX54-203ENST00000546869 M0QXV9 152 aa8.98□□□□□ -0.97
DDX54-203ENST00000546869 TSPEAR-AS2P59090 65 aa8.98□□□□□ -0.97
DDX54-203ENST00000546869 PRR3P79522 188 aaKnown RBP8.98□□□□□ -0.97
DDX54-203ENST00000546869 SERTAD4-AS1Q5TG53 156 aa8.98□□□□□ -0.97
DDX54-203ENST00000546869 C22orf24Q9Y442 160 aa8.98□□□□□ -0.97
DDX54-203ENST00000546869 C5orf52A6NGY3 159 aa8.97□□□□□ -0.97
DDX54-203ENST00000546869 LGALS3P17931 250 aaKnown RBP8.97□□□□□ -0.97
DDX54-203ENST00000546869 LINC00158P58513 81 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms