RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 HIST1H2BLQ99880 126 aa7.6□□□□□ -1.19
SNHG1-221ENST00000544983 TOMM7Q9P0U1 55 aa7.6□□□□□ -1.19
SNHG1-221ENST00000544983 PKHD1P08F94 4074 aa7.59□□□□□ -1.19
SNHG1-221ENST00000544983 TMEM223A0PJW6 202 aa7.59□□□□□ -1.19
SNHG1-221ENST00000544983 KRTDAPP60985 99 aa7.59□□□□□ -1.19
SNHG1-221ENST00000544983 HERVK_113P61574 105 aa7.59□□□□□ -1.19
SNHG1-221ENST00000544983 SNRPEP62304 92 aaKnown RBP7.59□□□□□ -1.19
SNHG1-221ENST00000544983 SDIM1Q6ZPB5 146 aa7.59□□□□□ -1.19
SNHG1-221ENST00000544983 LINC00526Q96FQ7 95 aa7.59□□□□□ -1.19
SNHG1-221ENST00000544983 LINC00474Q9P2X8 69 aa7.59□□□□□ -1.19
SNHG1-221ENST00000544983 FUSP35637 526 aaKnown RBP eCLIP7.58□□□□□ -1.2
SNHG1-221ENST00000544983 KRTAP10-1P60331 282 aa7.58□□□□□ -1.2
SNHG1-221ENST00000544983 Q6ZRU5 148 aa7.58□□□□□ -1.2
SNHG1-221ENST00000544983 DNAH11Q96DT5 4516 aa7.58□□□□□ -1.2
SNHG1-221ENST00000544983 LOC107984640A0A0U1RRK4 108 aa7.57□□□□□ -1.2
SNHG1-221ENST00000544983 CDK2AP2O75956 126 aa7.57□□□□□ -1.2
SNHG1-221ENST00000544983 UNQ6190/PRO20217Q6UXQ8 127 aa7.57□□□□□ -1.2
SNHG1-221ENST00000544983 Q6ZSA8 131 aa7.57□□□□□ -1.2
SNHG1-221ENST00000544983 TLX1NBP0CAT3 122 aa7.56□□□□□ -1.2
SNHG1-221ENST00000544983 PLEKHB2Q96CS7 222 aa7.56□□□□□ -1.2
SNHG1-221ENST00000544983 LINC01620Q4KN68 170 aa7.55□□□□□ -1.2
SNHG1-221ENST00000544983 C2orf82Q6UX34 121 aa7.55□□□□□ -1.2
SNHG1-221ENST00000544983 PMCHL2Q9BQD1 86 aa7.55□□□□□ -1.2
SNHG1-221ENST00000544983 CIRBPQ14011 172 aaKnown RBP7.54□□□□□ -1.2
SNHG1-221ENST00000544983 C10orf25Q5T742 122 aa7.54□□□□□ -1.2
SNHG1-221ENST00000544983 C6orf48Q9UBA6 75 aa7.54□□□□□ -1.2
SNHG1-221ENST00000544983 LINC00587B1AMM8 73 aa7.53□□□□□ -1.2
SNHG1-221ENST00000544983 NDUFC2-KCTD14E9PQ53 114 aa7.53□□□□□ -1.2
SNHG1-221ENST00000544983 LEPROTO15243 131 aa7.53□□□□□ -1.2
SNHG1-221ENST00000544983 NMUP48645 174 aa7.53□□□□□ -1.2
SNHG1-221ENST00000544983 HERV-K104P63124 156 aa7.53□□□□□ -1.2
SNHG1-221ENST00000544983 COX17Q14061 63 aa7.53□□□□□ -1.2
SNHG1-221ENST00000544983 MYMXA0A1B0GTQ4 84 aa7.52□□□□□ -1.21
SNHG1-221ENST00000544983 E9PLD3 99 aa7.52□□□□□ -1.21
SNHG1-221ENST00000544983 PTTG1IPP53801 180 aa7.52□□□□□ -1.21
SNHG1-221ENST00000544983 ZNF625Q96I27 306 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-221ENST00000544983 ABCA13Q86UQ4 5058 aa7.51□□□□□ -1.21
SNHG1-221ENST00000544983 J3QQQ9 107 aa7.51□□□□□ -1.21
SNHG1-221ENST00000544983 SPACA4Q8TDM5 124 aa7.51□□□□□ -1.21
SNHG1-221ENST00000544983 DPH3Q96FX2 82 aa7.51□□□□□ -1.21
SNHG1-221ENST00000544983 FAM30AQ9NZY2 134 aa7.51□□□□□ -1.21
SNHG1-221ENST00000544983 NDUFA12Q9UI09 145 aa7.51□□□□□ -1.21
SNHG1-221ENST00000544983 A0A096LNI7 61 aa7.5□□□□□ -1.21
SNHG1-221ENST00000544983 LGALS3P17931 250 aaKnown RBP7.5□□□□□ -1.21
SNHG1-221ENST00000544983 RPL18AQ02543 176 aaKnown RBP7.5□□□□□ -1.21
SNHG1-221ENST00000544983 DNAH5Q8TE73 4624 aa7.49□□□□□ -1.21
SNHG1-221ENST00000544983 IGKV2-24A0A0C4DH68 120 aa7.49□□□□□ -1.21
SNHG1-221ENST00000544983 XGP55808 180 aa7.49□□□□□ -1.21
SNHG1-221ENST00000544983 GAGE2BQ13066 116 aa7.49□□□□□ -1.21
SNHG1-221ENST00000544983 MAJINQ3KP22 176 aa7.49□□□□□ -1.21
SNHG1-221ENST00000544983 C9orf116Q5BN46 136 aaPredicted RBP7.49□□□□□ -1.21
SNHG1-221ENST00000544983 Q6ZRP5 223 aa7.49□□□□□ -1.21
SNHG1-221ENST00000544983 ERG28Q9UKR5 140 aa7.49□□□□□ -1.21
SNHG1-221ENST00000544983 TMA7Q9Y2S6 64 aaKnown RBP7.49□□□□□ -1.21
SNHG1-221ENST00000544983 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.49□□□□□ -1.21
SNHG1-221ENST00000544983 HSBP1L1C9JCN9 74 aa7.48□□□□□ -1.21
SNHG1-221ENST00000544983 STPG4Q8N801 248 aa7.48□□□□□ -1.21
SNHG1-221ENST00000544983 PLAC8Q9NZF1 115 aa7.48□□□□□ -1.21
SNHG1-221ENST00000544983 LRP1BQ9NZR2 4599 aa7.47□□□□□ -1.21
SNHG1-221ENST00000544983 SCGB1D1O95968 90 aa7.47□□□□□ -1.21
SNHG1-221ENST00000544983 CHTF8P0CG12 524 aa7.47□□□□□ -1.21
SNHG1-221ENST00000544983 SCXQ7RTU7 201 aa7.47□□□□□ -1.21
SNHG1-221ENST00000544983 CIRBP-AS1Q8TBR5 109 aa7.47□□□□□ -1.21
SNHG1-221ENST00000544983 DYNC1H1Q14204 4646 aaKnown RBP7.47□□□□□ -1.21
SNHG1-221ENST00000544983 A0A087WYN8 130 aa7.46□□□□□ -1.22
SNHG1-221ENST00000544983 EPM2AB3EWF7 344 aa7.46□□□□□ -1.22
SNHG1-221ENST00000544983 PANO1I0J062 215 aa7.46□□□□□ -1.22
SNHG1-221ENST00000544983 TSPEAR-AS2P59090 65 aa7.46□□□□□ -1.22
SNHG1-221ENST00000544983 GAGE2EQ4V326 116 aa7.46□□□□□ -1.22
SNHG1-221ENST00000544983 GAGE2DQ9UEU5 116 aa7.46□□□□□ -1.22
SNHG1-221ENST00000544983 PFN2P35080 140 aa7.45□□□□□ -1.22
SNHG1-221ENST00000544983 MEIG1Q5JSS6 88 aa7.45□□□□□ -1.22
SNHG1-221ENST00000544983 ATOH7Q8N100 152 aa7.45□□□□□ -1.22
SNHG1-221ENST00000544983 LINC00158P58513 81 aa7.44□□□□□ -1.22
SNHG1-221ENST00000544983 JOSD1Q15040 202 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-221ENST00000544983 LCE2DQ5TA82 110 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-221ENST00000544983 PLA2G2DQ9UNK4 145 aa7.43□□□□□ -1.22
SNHG1-221ENST00000544983 IGKV2D-26A0A0A0MRZ7 120 aa7.42□□□□□ -1.22
SNHG1-221ENST00000544983 ZNF815PA8K554 130 aa7.42□□□□□ -1.22
SNHG1-221ENST00000544983 TIMM17BO60830 172 aa7.42□□□□□ -1.22
SNHG1-221ENST00000544983 C9orf129Q5T035 196 aaKnown RBP7.42□□□□□ -1.22
SNHG1-221ENST00000544983 C7orf33Q8WU49 177 aa7.42□□□□□ -1.22
SNHG1-221ENST00000544983 KRTAP4-5Q9BYR2 181 aa7.42□□□□□ -1.22
SNHG1-221ENST00000544983 SND1-IT1Q9HBX3 110 aa7.42□□□□□ -1.22
SNHG1-221ENST00000544983 UBR4Q5T4S7 5183 aa7.42□□□□□ -1.22
SNHG1-221ENST00000544983 A0A1W2PNN7 141 aa7.41□□□□□ -1.22
SNHG1-221ENST00000544983 FAM229AH3BQW9 127 aa7.41□□□□□ -1.22
SNHG1-221ENST00000544983 SMIM13P0DJ93 91 aa7.41□□□□□ -1.22
SNHG1-221ENST00000544983 ANKRD39Q53RE8 183 aa7.41□□□□□ -1.22
SNHG1-221ENST00000544983 Q8N1X5 172 aa7.41□□□□□ -1.22
SNHG1-221ENST00000544983 XAGE1AQ9HD64 81 aa7.41□□□□□ -1.22
SNHG1-221ENST00000544983 HERC1Q15751 4861 aa7.4□□□□□ -1.22
SNHG1-221ENST00000544983 A0A0J9YXY3 114 aa7.4□□□□□ -1.22
SNHG1-221ENST00000544983 RPL24P83731 157 aaKnown RBP7.4□□□□□ -1.22
SNHG1-221ENST00000544983 TP73-AS1Q9UF72 201 aa7.4□□□□□ -1.22
SNHG1-221ENST00000544983 LOC107984156A0A0G2JMH3 177 aa7.39□□□□□ -1.23
SNHG1-221ENST00000544983 HAMPP81172 84 aa7.39□□□□□ -1.23
SNHG1-221ENST00000544983 LBHQ53QV2 105 aaPredicted RBP7.39□□□□□ -1.23
SNHG1-221ENST00000544983 SCGB1D4Q6XE38 83 aa7.39□□□□□ -1.23
SNHG1-221ENST00000544983 ARL17AQ8IVW1 177 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms