RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 CXCL5P42830 114 aa11.66□□□□□ -0.54
COPS7A-216ENST00000543170 MAJINQ3KP22 176 aa11.66□□□□□ -0.54
COPS7A-216ENST00000543170 C10orf25Q5T742 122 aa11.66□□□□□ -0.54
COPS7A-216ENST00000543170 FAM19A2Q8N3H0 131 aa11.66□□□□□ -0.54
COPS7A-216ENST00000543170 TOMM7Q9P0U1 55 aa11.66□□□□□ -0.54
COPS7A-216ENST00000543170 PLA2G1BP04054 148 aaKnown RBP11.65□□□□□ -0.54
COPS7A-216ENST00000543170 ZNF22P17026 224 aaPredicted RBP11.64□□□□□ -0.55
COPS7A-216ENST00000543170 C6orf226Q5I0X4 101 aa11.64□□□□□ -0.55
COPS7A-216ENST00000543170 C2orf82Q6UX34 121 aa11.64□□□□□ -0.55
COPS7A-216ENST00000543170 DPH3Q96FX2 82 aa11.64□□□□□ -0.55
COPS7A-216ENST00000543170 HIST1H2BKO60814 126 aa11.63□□□□□ -0.55
COPS7A-216ENST00000543170 ATP6V1G1O75348 118 aa11.63□□□□□ -0.55
COPS7A-216ENST00000543170 HIST1H2BJP06899 126 aa11.63□□□□□ -0.55
COPS7A-216ENST00000543170 HIST1H2BOP23527 126 aa11.63□□□□□ -0.55
COPS7A-216ENST00000543170 HIST1H2BBP33778 126 aa11.63□□□□□ -0.55
COPS7A-216ENST00000543170 HIST1H2BDP58876 126 aa11.63□□□□□ -0.55
COPS7A-216ENST00000543170 CKS1BP61024 79 aa11.63□□□□□ -0.55
COPS7A-216ENST00000543170 HIST1H2BCP62807 126 aa11.63□□□□□ -0.55
COPS7A-216ENST00000543170 RPL18AQ02543 176 aaKnown RBP11.63□□□□□ -0.55
COPS7A-216ENST00000543170 GAGE2BQ13066 116 aa11.63□□□□□ -0.55
COPS7A-216ENST00000543170 HIST2H2BEQ16778 126 aa11.63□□□□□ -0.55
COPS7A-216ENST00000543170 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.63□□□□□ -0.55
COPS7A-216ENST00000543170 STPG4Q8N801 248 aa11.63□□□□□ -0.55
COPS7A-216ENST00000543170 HIST1H2BHQ93079 126 aa11.63□□□□□ -0.55
COPS7A-216ENST00000543170 HIST1H2BNQ99877 126 aa11.63□□□□□ -0.55
COPS7A-216ENST00000543170 HIST1H2BMQ99879 126 aa11.63□□□□□ -0.55
COPS7A-216ENST00000543170 LEPROTL1O95214 131 aa11.62□□□□□ -0.55
COPS7A-216ENST00000543170 CHTOPQ9Y3Y2 248 aaKnown RBP11.62□□□□□ -0.55
COPS7A-216ENST00000543170 IGLV5-39A0A0G2JS06 123 aa11.61□□□□□ -0.55
COPS7A-216ENST00000543170 C11orf86A6NJI1 115 aa11.61□□□□□ -0.55
COPS7A-216ENST00000543170 F8VRH5 84 aa11.61□□□□□ -0.55
COPS7A-216ENST00000543170 NUPR1O60356 82 aa11.61□□□□□ -0.55
COPS7A-216ENST00000543170 SPINK8P0C7L1 97 aa11.61□□□□□ -0.55
COPS7A-216ENST00000543170 COX7B2Q8TF08 81 aa11.61□□□□□ -0.55
COPS7A-216ENST00000543170 HSPB8Q9UJY1 196 aa11.6□□□□□ -0.55
COPS7A-216ENST00000543170 NDUFC2-KCTD14E9PQ53 114 aa11.59□□□□□ -0.55
COPS7A-216ENST00000543170 Q6ZRP5 223 aa11.59□□□□□ -0.55
COPS7A-216ENST00000543170 KRTAP10-4P60372 401 aaPredicted RBP11.58□□□□□ -0.56
COPS7A-216ENST00000543170 RPL37AP61513 92 aaKnown RBP11.57□□□□□ -0.56
COPS7A-216ENST00000543170 TMEM170BQ5T4T1 132 aa11.57□□□□□ -0.56
COPS7A-216ENST00000543170 ODF1Q14990 250 aa11.56□□□□□ -0.56
COPS7A-216ENST00000543170 C7orf33Q8WU49 177 aa11.56□□□□□ -0.56
COPS7A-216ENST00000543170 SRRM2Q9UQ35 2752 aaKnown RBP11.56□□□□□ -0.56
COPS7A-216ENST00000543170 INAFM2P0DMQ5 153 aa11.55□□□□□ -0.56
COPS7A-216ENST00000543170 C9orf116Q5BN46 136 aaPredicted RBP11.55□□□□□ -0.56
COPS7A-216ENST00000543170 COA6Q5JTJ3 125 aaKnown RBP11.54□□□□□ -0.56
COPS7A-216ENST00000543170 SFTA2Q6UW10 78 aa11.54□□□□□ -0.56
COPS7A-216ENST00000543170 A0A1W2PNN7 141 aa11.53□□□□□ -0.56
COPS7A-216ENST00000543170 TMEM223A0PJW6 202 aa11.53□□□□□ -0.56
COPS7A-216ENST00000543170 FABP4P15090 132 aa11.53□□□□□ -0.56
COPS7A-216ENST00000543170 GAGE2EQ4V326 116 aa11.53□□□□□ -0.56
COPS7A-216ENST00000543170 GAGE2DQ9UEU5 116 aa11.53□□□□□ -0.56
COPS7A-216ENST00000543170 PKHD1L1Q86WI1 4243 aa11.52□□□□□ -0.57
COPS7A-216ENST00000543170 H0Y8G0 127 aa11.51□□□□□ -0.57
COPS7A-216ENST00000543170 PLNP26678 52 aa11.51□□□□□ -0.57
COPS7A-216ENST00000543170 MAP1LC3CQ9BXW4 147 aa11.51□□□□□ -0.57
COPS7A-216ENST00000543170 C9orf129Q5T035 196 aaKnown RBP11.49□□□□□ -0.57
COPS7A-216ENST00000543170 DPM2O94777 84 aa11.47□□□□□ -0.57
COPS7A-216ENST00000543170 ZNF625Q96I27 306 aaPredicted RBP11.47□□□□□ -0.57
COPS7A-216ENST00000543170 MYCBP2O75592 4640 aa11.47□□□□□ -0.57
COPS7A-216ENST00000543170 FAM168BA1KXE4 195 aa11.46□□□□□ -0.57
COPS7A-216ENST00000543170 PRR3P79522 188 aaKnown RBP11.46□□□□□ -0.57
COPS7A-216ENST00000543170 FLG2Q5D862 2391 aaPredicted RBP11.46□□□□□ -0.58
COPS7A-216ENST00000543170 SYS1-DBNDD2H3BUS1 97 aa11.45□□□□□ -0.58
COPS7A-216ENST00000543170 IGKCP01834 107 aa11.45□□□□□ -0.58
COPS7A-216ENST00000543170 COX17Q14061 63 aa11.45□□□□□ -0.58
COPS7A-216ENST00000543170 FAM19A5Q7Z5A7 132 aaPredicted RBP11.45□□□□□ -0.58
COPS7A-216ENST00000543170 KRTAP7-1Q8IUC3 87 aa11.44□□□□□ -0.58
COPS7A-216ENST00000543170 ERG28Q9UKR5 140 aa11.44□□□□□ -0.58
COPS7A-216ENST00000543170 PHF5AQ7RTV0 110 aaKnown RBP11.43□□□□□ -0.58
COPS7A-216ENST00000543170 XAGE1AQ9HD64 81 aa11.43□□□□□ -0.58
COPS7A-216ENST00000543170 M0QXV9 152 aa11.42□□□□□ -0.58
COPS7A-216ENST00000543170 HERVK_113P61574 105 aa11.42□□□□□ -0.58
COPS7A-216ENST00000543170 PMCHL2Q9BQD1 86 aa11.42□□□□□ -0.58
COPS7A-216ENST00000543170 HNRNPA3P51991 378 aaKnown RBP11.41□□□□□ -0.58
COPS7A-216ENST00000543170 LINC01545Q5VT33 79 aa11.41□□□□□ -0.58
COPS7A-216ENST00000543170 PET117Q6UWS5 81 aa11.41□□□□□ -0.58
COPS7A-216ENST00000543170 PLA2G2DQ9UNK4 145 aa11.41□□□□□ -0.58
COPS7A-216ENST00000543170 LEPROTO15243 131 aa11.4□□□□□ -0.58
COPS7A-216ENST00000543170 HERV-K104P63124 156 aa11.4□□□□□ -0.58
COPS7A-216ENST00000543170 SERTAD4-AS1Q5TG53 156 aa11.4□□□□□ -0.58
COPS7A-216ENST00000543170 PLEKHB2Q96CS7 222 aa11.4□□□□□ -0.58
COPS7A-216ENST00000543170 TP73-AS1Q9UF72 201 aa11.4□□□□□ -0.58
COPS7A-216ENST00000543170 PFN2P35080 140 aa11.39□□□□□ -0.59
COPS7A-216ENST00000543170 C3orf79P0CE67 100 aa11.38□□□□□ -0.59
COPS7A-216ENST00000543170 NDUFA12Q9UI09 145 aa11.38□□□□□ -0.59
COPS7A-216ENST00000543170 FAT3Q8TDW7 4589 aa11.37□□□□□ -0.59
COPS7A-216ENST00000543170 MYMXA0A1B0GTQ4 84 aa11.37□□□□□ -0.59
COPS7A-216ENST00000543170 PSORS1C2Q9UIG4 136 aa11.37□□□□□ -0.59
COPS7A-216ENST00000543170 IGLV5-37A0A075B6J1 123 aa11.36□□□□□ -0.59
COPS7A-216ENST00000543170 LINC00587B1AMM8 73 aa11.36□□□□□ -0.59
COPS7A-216ENST00000543170 NMUP48645 174 aa11.36□□□□□ -0.59
COPS7A-216ENST00000543170 TSPEAR-AS2P59090 65 aa11.36□□□□□ -0.59
COPS7A-216ENST00000543170 C22orf24Q9Y442 160 aa11.36□□□□□ -0.59
COPS7A-216ENST00000543170 J3QQQ9 107 aa11.35□□□□□ -0.59
COPS7A-216ENST00000543170 LBHQ53QV2 105 aaPredicted RBP11.35□□□□□ -0.59
COPS7A-216ENST00000543170 SND1-IT1Q9HBX3 110 aa11.35□□□□□ -0.59
COPS7A-216ENST00000543170 KRTAP29-1A8MX34 341 aaPredicted RBP11.34□□□□□ -0.59
COPS7A-216ENST00000543170 E9PLD3 99 aa11.34□□□□□ -0.59
COPS7A-216ENST00000543170 KRTDAPP60985 99 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms