RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 IGKCP01834 107 aa7.89□□□□□ -1.15
DDX55-210ENST00000543016 C3orf79P0CE67 100 aa7.89□□□□□ -1.15
DDX55-210ENST00000543016 KRTDAPP60985 99 aa7.89□□□□□ -1.15
DDX55-210ENST00000543016 COX7B2Q8TF08 81 aa7.89□□□□□ -1.15
DDX55-210ENST00000543016 TRBV30A0A0K0K1B3 111 aa7.88□□□□□ -1.15
DDX55-210ENST00000543016 TMEM223A0PJW6 202 aa7.88□□□□□ -1.15
DDX55-210ENST00000543016 SPINK8P0C7L1 97 aa7.88□□□□□ -1.15
DDX55-210ENST00000543016 HERVK_113P61574 105 aa7.88□□□□□ -1.15
DDX55-210ENST00000543016 TOMM7Q9P0U1 55 aa7.88□□□□□ -1.15
DDX55-210ENST00000543016 Q6ZRU5 148 aa7.87□□□□□ -1.15
DDX55-210ENST00000543016 LINC00526Q96FQ7 95 aa7.87□□□□□ -1.15
DDX55-210ENST00000543016 HECTD4Q9Y4D8 3996 aa7.86□□□□□ -1.15
DDX55-210ENST00000543016 SDIM1Q6ZPB5 146 aa7.86□□□□□ -1.15
DDX55-210ENST00000543016 LINC00474Q9P2X8 69 aa7.86□□□□□ -1.15
DDX55-210ENST00000543016 PKD1P98161 4303 aa7.85□□□□□ -1.15
DDX55-210ENST00000543016 LOC107984640A0A0U1RRK4 108 aa7.85□□□□□ -1.15
DDX55-210ENST00000543016 TLX1NBP0CAT3 122 aa7.85□□□□□ -1.15
DDX55-210ENST00000543016 FUSP35637 526 aaKnown RBP eCLIP7.85□□□□□ -1.15
DDX55-210ENST00000543016 KRTAP10-1P60331 282 aa7.85□□□□□ -1.15
DDX55-210ENST00000543016 UNQ6190/PRO20217Q6UXQ8 127 aa7.85□□□□□ -1.15
DDX55-210ENST00000543016 PLEKHB2Q96CS7 222 aa7.85□□□□□ -1.15
DDX55-210ENST00000543016 DNAH11Q96DT5 4516 aa7.84□□□□□ -1.15
DDX55-210ENST00000543016 Q6ZSA8 131 aa7.84□□□□□ -1.15
DDX55-210ENST00000543016 PMCHL2Q9BQD1 86 aa7.84□□□□□ -1.15
DDX55-210ENST00000543016 LEPROTO15243 131 aa7.83□□□□□ -1.16
DDX55-210ENST00000543016 CDK2AP2O75956 126 aa7.83□□□□□ -1.16
DDX55-210ENST00000543016 C2orf82Q6UX34 121 aa7.83□□□□□ -1.16
DDX55-210ENST00000543016 C6orf48Q9UBA6 75 aa7.83□□□□□ -1.16
DDX55-210ENST00000543016 LINC00587B1AMM8 73 aa7.82□□□□□ -1.16
DDX55-210ENST00000543016 LINC01620Q4KN68 170 aa7.82□□□□□ -1.16
DDX55-210ENST00000543016 C10orf25Q5T742 122 aa7.82□□□□□ -1.16
DDX55-210ENST00000543016 E9PLD3 99 aa7.81□□□□□ -1.16
DDX55-210ENST00000543016 NMUP48645 174 aa7.81□□□□□ -1.16
DDX55-210ENST00000543016 HERV-K104P63124 156 aa7.81□□□□□ -1.16
DDX55-210ENST00000543016 CIRBPQ14011 172 aaKnown RBP7.81□□□□□ -1.16
DDX55-210ENST00000543016 COX17Q14061 63 aa7.81□□□□□ -1.16
DDX55-210ENST00000543016 MYMXA0A1B0GTQ4 84 aa7.8□□□□□ -1.16
DDX55-210ENST00000543016 NDUFC2-KCTD14E9PQ53 114 aa7.8□□□□□ -1.16
DDX55-210ENST00000543016 ZNF625Q96I27 306 aaPredicted RBP7.8□□□□□ -1.16
DDX55-210ENST00000543016 J3QQQ9 107 aa7.79□□□□□ -1.16
DDX55-210ENST00000543016 LGALS3P17931 250 aaKnown RBP7.79□□□□□ -1.16
DDX55-210ENST00000543016 PTTG1IPP53801 180 aa7.79□□□□□ -1.16
DDX55-210ENST00000543016 NDUFA12Q9UI09 145 aa7.79□□□□□ -1.16
DDX55-210ENST00000543016 TMA7Q9Y2S6 64 aaKnown RBP7.79□□□□□ -1.16
DDX55-210ENST00000543016 DNAH5Q8TE73 4624 aa7.79□□□□□ -1.16
DDX55-210ENST00000543016 PKHD1P08F94 4074 aa7.78□□□□□ -1.16
DDX55-210ENST00000543016 LOC100996750A0A140TA64 210 aa7.78□□□□□ -1.16
DDX55-210ENST00000543016 RPL18AQ02543 176 aaKnown RBP7.78□□□□□ -1.16
DDX55-210ENST00000543016 GAGE2BQ13066 116 aa7.78□□□□□ -1.16
DDX55-210ENST00000543016 SPACA4Q8TDM5 124 aa7.78□□□□□ -1.16
DDX55-210ENST00000543016 KRTAP4-6Q9BYQ5 205 aa7.78□□□□□ -1.16
DDX55-210ENST00000543016 EPPK1P58107 5090 aaKnown RBP7.77□□□□□ -1.17
DDX55-210ENST00000543016 A0A096LNI7 61 aa7.77□□□□□ -1.17
DDX55-210ENST00000543016 HSBP1L1C9JCN9 74 aa7.77□□□□□ -1.17
DDX55-210ENST00000543016 SCGB1D1O95968 90 aa7.77□□□□□ -1.17
DDX55-210ENST00000543016 STPG4Q8N801 248 aa7.77□□□□□ -1.17
DDX55-210ENST00000543016 DPH3Q96FX2 82 aa7.77□□□□□ -1.17
DDX55-210ENST00000543016 FAM30AQ9NZY2 134 aa7.77□□□□□ -1.17
DDX55-210ENST00000543016 ERG28Q9UKR5 140 aa7.77□□□□□ -1.17
DDX55-210ENST00000543016 DYNC1H1Q14204 4646 aaKnown RBP7.76□□□□□ -1.17
DDX55-210ENST00000543016 IGKV2-24A0A0C4DH68 120 aa7.76□□□□□ -1.17
DDX55-210ENST00000543016 MAJINQ3KP22 176 aa7.76□□□□□ -1.17
DDX55-210ENST00000543016 C9orf116Q5BN46 136 aaPredicted RBP7.76□□□□□ -1.17
DDX55-210ENST00000543016 Q6ZRP5 223 aa7.76□□□□□ -1.17
DDX55-210ENST00000543016 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.76□□□□□ -1.17
DDX55-210ENST00000543016 LRP1BQ9NZR2 4599 aa7.75□□□□□ -1.17
DDX55-210ENST00000543016 XGP55808 180 aa7.75□□□□□ -1.17
DDX55-210ENST00000543016 PLAC8Q9NZF1 115 aa7.75□□□□□ -1.17
DDX55-210ENST00000543016 CHTF8P0CG12 524 aa7.74□□□□□ -1.17
DDX55-210ENST00000543016 TSPEAR-AS2P59090 65 aa7.74□□□□□ -1.17
DDX55-210ENST00000543016 JOSD1Q15040 202 aaPredicted RBP7.74□□□□□ -1.17
DDX55-210ENST00000543016 GAGE2EQ4V326 116 aa7.74□□□□□ -1.17
DDX55-210ENST00000543016 SCXQ7RTU7 201 aa7.74□□□□□ -1.17
DDX55-210ENST00000543016 ATOH7Q8N100 152 aa7.74□□□□□ -1.17
DDX55-210ENST00000543016 CIRBP-AS1Q8TBR5 109 aa7.74□□□□□ -1.17
DDX55-210ENST00000543016 GAGE2DQ9UEU5 116 aa7.74□□□□□ -1.17
DDX55-210ENST00000543016 BIRC6Q9NR09 4857 aa7.73□□□□□ -1.17
DDX55-210ENST00000543016 A0A087WYN8 130 aa7.73□□□□□ -1.17
DDX55-210ENST00000543016 EPM2AB3EWF7 344 aa7.73□□□□□ -1.17
DDX55-210ENST00000543016 MEIG1Q5JSS6 88 aa7.73□□□□□ -1.17
DDX55-210ENST00000543016 PANO1I0J062 215 aa7.72□□□□□ -1.17
DDX55-210ENST00000543016 PFN2P35080 140 aa7.72□□□□□ -1.17
DDX55-210ENST00000543016 LINC00158P58513 81 aa7.72□□□□□ -1.17
DDX55-210ENST00000543016 IGKV2D-26A0A0A0MRZ7 120 aa7.71□□□□□ -1.18
DDX55-210ENST00000543016 ANKRD39Q53RE8 183 aa7.71□□□□□ -1.18
DDX55-210ENST00000543016 PLA2G2DQ9UNK4 145 aa7.71□□□□□ -1.18
DDX55-210ENST00000543016 ZNF815PA8K554 130 aa7.7□□□□□ -1.18
DDX55-210ENST00000543016 TIMM17BO60830 172 aa7.7□□□□□ -1.18
DDX55-210ENST00000543016 C9orf129Q5T035 196 aaKnown RBP7.7□□□□□ -1.18
DDX55-210ENST00000543016 A0A0J9YXY3 114 aa7.69□□□□□ -1.18
DDX55-210ENST00000543016 FAM229AH3BQW9 127 aa7.69□□□□□ -1.18
DDX55-210ENST00000543016 SMIM13P0DJ93 91 aa7.69□□□□□ -1.18
DDX55-210ENST00000543016 SND1-IT1Q9HBX3 110 aa7.69□□□□□ -1.18
DDX55-210ENST00000543016 XAGE1AQ9HD64 81 aa7.69□□□□□ -1.18
DDX55-210ENST00000543016 DNAH8Q96JB1 4490 aa7.68□□□□□ -1.18
DDX55-210ENST00000543016 A0A1W2PNN7 141 aa7.68□□□□□ -1.18
DDX55-210ENST00000543016 RPL24P83731 157 aaKnown RBP7.68□□□□□ -1.18
DDX55-210ENST00000543016 C7orf33Q8WU49 177 aa7.68□□□□□ -1.18
DDX55-210ENST00000543016 TP73-AS1Q9UF72 201 aa7.68□□□□□ -1.18
DDX55-210ENST00000543016 LOC107984156A0A0G2JMH3 177 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms