RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 LOC389332A0A1B0GUA5 103 aa7.13□□□□□ -1.27
YBX3-207ENST00000539204 SYS1-DBNDD2H3BUS1 97 aa7.13□□□□□ -1.27
YBX3-207ENST00000539204 CCL25O15444 150 aa7.13□□□□□ -1.27
YBX3-207ENST00000539204 APOMO95445 188 aa7.13□□□□□ -1.27
YBX3-207ENST00000539204 FCER1GP30273 86 aa7.13□□□□□ -1.27
YBX3-207ENST00000539204 RPL18AQ02543 176 aaKnown RBP7.13□□□□□ -1.27
YBX3-207ENST00000539204 PET117Q6UWS5 81 aa7.13□□□□□ -1.27
YBX3-207ENST00000539204 OR5A1Q8NGJ0 315 aa7.13□□□□□ -1.27
YBX3-207ENST00000539204 TRBV6-5A0A0K0K1A5 114 aa7.12□□□□□ -1.27
YBX3-207ENST00000539204 PCP4L1A6NKN8 68 aa7.12□□□□□ -1.27
YBX3-207ENST00000539204 TSTD3H0UI37 97 aa7.12□□□□□ -1.27
YBX3-207ENST00000539204 H7C423 109 aa7.12□□□□□ -1.27
YBX3-207ENST00000539204 HBDP02042 147 aa7.12□□□□□ -1.27
YBX3-207ENST00000539204 SMIM2Q9BVW6 85 aa7.12□□□□□ -1.27
YBX3-207ENST00000539204 MAP1LC3CQ9BXW4 147 aa7.12□□□□□ -1.27
YBX3-207ENST00000539204 LINC00959A0A1B0GUT2 108 aa7.11□□□□□ -1.27
YBX3-207ENST00000539204 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.11□□□□□ -1.27
YBX3-207ENST00000539204 SUMO2P61956 95 aaKnown RBP7.11□□□□□ -1.27
YBX3-207ENST00000539204 KRTAP11-1Q8IUC1 163 aa7.11□□□□□ -1.27
YBX3-207ENST00000539204 CAMK2N2Q96S95 79 aa7.11□□□□□ -1.27
YBX3-207ENST00000539204 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.1□□□□□ -1.27
YBX3-207ENST00000539204 C20orf202A1L168 122 aa7.1□□□□□ -1.27
YBX3-207ENST00000539204 IGKV2-29A2NJV5 120 aaPredicted RBP7.1□□□□□ -1.27
YBX3-207ENST00000539204 LINC01549A6NIU2 74 aa7.1□□□□□ -1.27
YBX3-207ENST00000539204 POLR2KP53803 58 aaKnown RBP7.1□□□□□ -1.27
YBX3-207ENST00000539204 SS18Q15532 418 aa7.1□□□□□ -1.27
YBX3-207ENST00000539204 LINC01545Q5VT33 79 aa7.1□□□□□ -1.27
YBX3-207ENST00000539204 CD164L2Q6UWJ8 174 aa7.1□□□□□ -1.27
YBX3-207ENST00000539204 LINC00173Q6ZV60 143 aa7.1□□□□□ -1.27
YBX3-207ENST00000539204 MALP21145 153 aa7.09□□□□□ -1.27
YBX3-207ENST00000539204 G0S2P27469 103 aa7.09□□□□□ -1.27
YBX3-207ENST00000539204 ORMDL2Q53FV1 153 aa7.09□□□□□ -1.27
YBX3-207ENST00000539204 TMEM101Q96IK0 257 aa7.09□□□□□ -1.27
YBX3-207ENST00000539204 VAMP8Q9BV40 100 aa7.09□□□□□ -1.27
YBX3-207ENST00000539204 ST20Q9HBF5 79 aa7.09□□□□□ -1.27
YBX3-207ENST00000539204 VCYO14598 125 aa7.08□□□□□ -1.28
YBX3-207ENST00000539204 TCAPO15273 167 aa7.08□□□□□ -1.28
YBX3-207ENST00000539204 ATP5LO75964 103 aa7.08□□□□□ -1.28
YBX3-207ENST00000539204 ZNF25P17030 456 aaPredicted RBP7.08□□□□□ -1.28
YBX3-207ENST00000539204 TPRXLQ17RH7 258 aa7.08□□□□□ -1.28
YBX3-207ENST00000539204 IFI27L1Q96BM0 104 aa7.08□□□□□ -1.28
YBX3-207ENST00000539204 RPL39LQ96EH5 51 aaKnown RBP7.08□□□□□ -1.28
YBX3-207ENST00000539204 OPRPNQ99935 248 aaPredicted RBP7.08□□□□□ -1.28
YBX3-207ENST00000539204 TRBV27A0A0K0K1C4 114 aa7.07□□□□□ -1.28
YBX3-207ENST00000539204 LINC00587B1AMM8 73 aa7.07□□□□□ -1.28
YBX3-207ENST00000539204 DDTP30046 118 aa7.07□□□□□ -1.28
YBX3-207ENST00000539204 C2orf48Q96LS8 159 aa7.07□□□□□ -1.28
YBX3-207ENST00000539204 PRO1933Q9H354 126 aa7.07□□□□□ -1.28
YBX3-207ENST00000539204 FAM168BA1KXE4 195 aa7.06□□□□□ -1.28
YBX3-207ENST00000539204 UBE2BP63146 152 aa7.06□□□□□ -1.28
YBX3-207ENST00000539204 RNF151Q2KHN1 245 aa7.06□□□□□ -1.28
YBX3-207ENST00000539204 TOMM6Q96B49 74 aa7.06□□□□□ -1.28
YBX3-207ENST00000539204 RETNLBQ9BQ08 111 aa7.06□□□□□ -1.28
YBX3-207ENST00000539204 CRYGAP11844 174 aa7.05□□□□□ -1.28
YBX3-207ENST00000539204 TYMSOSQ8TAI1 123 aa7.05□□□□□ -1.28
YBX3-207ENST00000539204 MIEN1Q9BRT3 115 aa7.05□□□□□ -1.28
YBX3-207ENST00000539204 IGLV7-46A0A075B6I9 117 aa7.04□□□□□ -1.28
YBX3-207ENST00000539204 SDHAF1A6NFY7 115 aa7.04□□□□□ -1.28
YBX3-207ENST00000539204 COX7A2LO14548 114 aa7.04□□□□□ -1.28
YBX3-207ENST00000539204 ZNF861PO60384 105 aa7.04□□□□□ -1.28
YBX3-207ENST00000539204 SPATA45Q537H7 98 aa7.04□□□□□ -1.28
YBX3-207ENST00000539204 FAM19A5Q7Z5A7 132 aaPredicted RBP7.04□□□□□ -1.28
YBX3-207ENST00000539204 KIR2DL4Q99706 377 aa7.04□□□□□ -1.28
YBX3-207ENST00000539204 PAM16Q9Y3D7 125 aa7.04□□□□□ -1.28
YBX3-207ENST00000539204 TRAV12-1A0A0B4J245 112 aa7.03□□□□□ -1.28
YBX3-207ENST00000539204 IGLC3P0DOY3 106 aa7.03□□□□□ -1.28
YBX3-207ENST00000539204 ERASQ7Z444 233 aa7.03□□□□□ -1.28
YBX3-207ENST00000539204 MRPL52Q86TS9 123 aaKnown RBP7.03□□□□□ -1.28
YBX3-207ENST00000539204 CDC42SE2Q9NRR3 84 aa7.03□□□□□ -1.28
YBX3-207ENST00000539204 A0A087X002 238 aa7.02□□□□□ -1.29
YBX3-207ENST00000539204 HSBP1L1C9JCN9 74 aa7.02□□□□□ -1.29
YBX3-207ENST00000539204 I3L3M4 83 aa7.02□□□□□ -1.29
YBX3-207ENST00000539204 C2orf66Q6UXQ4 117 aa7.02□□□□□ -1.29
YBX3-207ENST00000539204 ATOH7Q8N100 152 aa7.02□□□□□ -1.29
YBX3-207ENST00000539204 CYSLTR1Q9Y271 337 aa7.02□□□□□ -1.29
YBX3-207ENST00000539204 SCGB3A1Q96QR1 104 aa7.01□□□□□ -1.29
YBX3-207ENST00000539204 UQCR10Q9UDW1 63 aa7.01□□□□□ -1.29
YBX3-207ENST00000539204 IGIPA6NJ69 53 aa7□□□□□ -1.29
YBX3-207ENST00000539204 M0QXV9 152 aa7□□□□□ -1.29
YBX3-207ENST00000539204 TSHBP01222 138 aa7□□□□□ -1.29
YBX3-207ENST00000539204 GAGE2EQ4V326 116 aa7□□□□□ -1.29
YBX3-207ENST00000539204 TMEM141Q96I45 108 aa7□□□□□ -1.29
YBX3-207ENST00000539204 C14orf144Q96I85 54 aa7□□□□□ -1.29
YBX3-207ENST00000539204 TIMM17AQ99595 171 aa7□□□□□ -1.29
YBX3-207ENST00000539204 MRPL35Q9NZE8 188 aaKnown RBP7□□□□□ -1.29
YBX3-207ENST00000539204 GAGE2DQ9UEU5 116 aa7□□□□□ -1.29
YBX3-207ENST00000539204 H0Y8G0 127 aa6.99□□□□□ -1.29
YBX3-207ENST00000539204 NPSP0C0P6 89 aa6.99□□□□□ -1.29
YBX3-207ENST00000539204 SPAG11BQ08648 103 aa6.99□□□□□ -1.29
YBX3-207ENST00000539204 LBHQ53QV2 105 aaPredicted RBP6.99□□□□□ -1.29
YBX3-207ENST00000539204 Q6ZN92 141 aa6.99□□□□□ -1.29
YBX3-207ENST00000539204 C5orf38Q86SI9 138 aa6.99□□□□□ -1.29
YBX3-207ENST00000539204 DPM2O94777 84 aa6.98□□□□□ -1.29
YBX3-207ENST00000539204 IGKCP01834 107 aa6.98□□□□□ -1.29
YBX3-207ENST00000539204 TLX1NBP0CAT3 122 aa6.98□□□□□ -1.29
YBX3-207ENST00000539204 KRTAP7-1Q8IUC3 87 aa6.98□□□□□ -1.29
YBX3-207ENST00000539204 PMCHL2Q9BQD1 86 aa6.98□□□□□ -1.29
YBX3-207ENST00000539204 PPDPFQ9H3Y8 114 aa6.98□□□□□ -1.29
YBX3-207ENST00000539204 PYGO1Q9Y3Y4 419 aa6.98□□□□□ -1.29
YBX3-207ENST00000539204 F8WDY8 70 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms