RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 C2orf82Q6UX34 121 aa13.85□□□□□ -0.19
SSPN-204ENST00000535504 IFI27L1Q96BM0 104 aa13.85□□□□□ -0.19
SSPN-204ENST00000535504 TLX1NBP0CAT3 122 aa13.84□□□□□ -0.19
SSPN-204ENST00000535504 C10orf25Q5T742 122 aa13.84□□□□□ -0.19
SSPN-204ENST00000535504 COX7B2Q8TF08 81 aa13.84□□□□□ -0.19
SSPN-204ENST00000535504 SMIM1B2RUZ4 78 aa13.83□□□□□ -0.2
SSPN-204ENST00000535504 SPINK8P0C7L1 97 aa13.83□□□□□ -0.2
SSPN-204ENST00000535504 F8VRH5 84 aa13.82□□□□□ -0.2
SSPN-204ENST00000535504 CHTOPQ9Y3Y2 248 aaKnown RBP13.82□□□□□ -0.2
SSPN-204ENST00000535504 GAGE2EQ4V326 116 aa13.81□□□□□ -0.2
SSPN-204ENST00000535504 GAGE2DQ9UEU5 116 aa13.81□□□□□ -0.2
SSPN-204ENST00000535504 NDUFC2-KCTD14E9PQ53 114 aa13.8□□□□□ -0.2
SSPN-204ENST00000535504 SERF1AO75920 110 aa13.8□□□□□ -0.2
SSPN-204ENST00000535504 TMEM170BQ5T4T1 132 aa13.8□□□□□ -0.2
SSPN-204ENST00000535504 FAM19A2Q8N3H0 131 aa13.8□□□□□ -0.2
SSPN-204ENST00000535504 TRAV12-1A0A0B4J245 112 aa13.79□□□□□ -0.2
SSPN-204ENST00000535504 SCO1O75880 301 aa13.79□□□□□ -0.2
SSPN-204ENST00000535504 LEPROTL1O95214 131 aa13.79□□□□□ -0.2
SSPN-204ENST00000535504 FAT1Q14517 4588 aa13.78□□□□□ -0.2
SSPN-204ENST00000535504 C9orf116Q5BN46 136 aaPredicted RBP13.78□□□□□ -0.2
SSPN-204ENST00000535504 HSPB8Q9UJY1 196 aa13.78□□□□□ -0.2
SSPN-204ENST00000535504 ZNF22P17026 224 aaPredicted RBP13.77□□□□□ -0.21
SSPN-204ENST00000535504 Q6ZRP5 223 aa13.77□□□□□ -0.21
SSPN-204ENST00000535504 PCLOQ9Y6V0 5065 aa13.77□□□□□ -0.21
SSPN-204ENST00000535504 H0Y8G0 127 aa13.75□□□□□ -0.21
SSPN-204ENST00000535504 ABCA13Q86UQ4 5058 aa13.75□□□□□ -0.21
SSPN-204ENST00000535504 C11orf86A6NJI1 115 aa13.74□□□□□ -0.21
SSPN-204ENST00000535504 SFTA2Q6UW10 78 aa13.74□□□□□ -0.21
SSPN-204ENST00000535504 S100A1P23297 94 aa13.72□□□□□ -0.21
SSPN-204ENST00000535504 SRRM2Q9UQ35 2752 aaKnown RBP13.72□□□□□ -0.21
SSPN-204ENST00000535504 A0A1W2PNN7 141 aa13.71□□□□□ -0.21
SSPN-204ENST00000535504 FAM19A5Q7Z5A7 132 aaPredicted RBP13.71□□□□□ -0.21
SSPN-204ENST00000535504 IGLV5-39A0A0G2JS06 123 aa13.7□□□□□ -0.22
SSPN-204ENST00000535504 FABP4P15090 132 aa13.7□□□□□ -0.22
SSPN-204ENST00000535504 VPS13BQ7Z7G8 4022 aa13.69□□□□□ -0.22
SSPN-204ENST00000535504 KRTAP10-4P60372 401 aaPredicted RBP13.68□□□□□ -0.22
SSPN-204ENST00000535504 MAP1LC3CQ9BXW4 147 aa13.68□□□□□ -0.22
SSPN-204ENST00000535504 FLG2Q5D862 2391 aaPredicted RBP13.68□□□□□ -0.22
SSPN-204ENST00000535504 J3QL48 77 aa13.67□□□□□ -0.22
SSPN-204ENST00000535504 HIST1H2BKO60814 126 aa13.67□□□□□ -0.22
SSPN-204ENST00000535504 HIST1H2BJP06899 126 aa13.67□□□□□ -0.22
SSPN-204ENST00000535504 HIST1H2BOP23527 126 aa13.67□□□□□ -0.22
SSPN-204ENST00000535504 HIST1H2BBP33778 126 aa13.67□□□□□ -0.22
SSPN-204ENST00000535504 HIST1H2BDP58876 126 aa13.67□□□□□ -0.22
SSPN-204ENST00000535504 HIST1H2BCP62807 126 aa13.67□□□□□ -0.22
SSPN-204ENST00000535504 PRR3P79522 188 aaKnown RBP13.67□□□□□ -0.22
SSPN-204ENST00000535504 HIST2H2BEQ16778 126 aa13.67□□□□□ -0.22
SSPN-204ENST00000535504 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.67□□□□□ -0.22
SSPN-204ENST00000535504 HIST1H2BHQ93079 126 aa13.67□□□□□ -0.22
SSPN-204ENST00000535504 HIST1H2BNQ99877 126 aa13.67□□□□□ -0.22
SSPN-204ENST00000535504 HIST1H2BMQ99879 126 aa13.67□□□□□ -0.22
SSPN-204ENST00000535504 M0QXV9 152 aa13.66□□□□□ -0.22
SSPN-204ENST00000535504 PLNP26678 52 aa13.66□□□□□ -0.22
SSPN-204ENST00000535504 LINC00310P59036 64 aa13.66□□□□□ -0.22
SSPN-204ENST00000535504 UBE2BP63146 152 aa13.66□□□□□ -0.22
SSPN-204ENST00000535504 PHF5AQ7RTV0 110 aaKnown RBP13.65□□□□□ -0.22
SSPN-204ENST00000535504 XAGE1AQ9HD64 81 aa13.65□□□□□ -0.22
SSPN-204ENST00000535504 TMEM223A0PJW6 202 aa13.64□□□□□ -0.23
SSPN-204ENST00000535504 FAM168BA1KXE4 195 aa13.64□□□□□ -0.23
SSPN-204ENST00000535504 HERVK_113P61574 105 aa13.64□□□□□ -0.23
SSPN-204ENST00000535504 ODF1Q14990 250 aa13.64□□□□□ -0.23
SSPN-204ENST00000535504 NUPR1O60356 82 aa13.63□□□□□ -0.23
SSPN-204ENST00000535504 C9orf129Q5T035 196 aaKnown RBP13.63□□□□□ -0.23
SSPN-204ENST00000535504 PFN2P35080 140 aa13.62□□□□□ -0.23
SSPN-204ENST00000535504 COX17Q14061 63 aa13.62□□□□□ -0.23
SSPN-204ENST00000535504 LBHQ53QV2 105 aaPredicted RBP13.62□□□□□ -0.23
SSPN-204ENST00000535504 DPM2O94777 84 aa13.61□□□□□ -0.23
SSPN-204ENST00000535504 ERG28Q9UKR5 140 aa13.61□□□□□ -0.23
SSPN-204ENST00000535504 ATP6V1G1O75348 118 aa13.6□□□□□ -0.23
SSPN-204ENST00000535504 OXTP01178 125 aa13.6□□□□□ -0.23
SSPN-204ENST00000535504 C1orf137Q5JT78 98 aa13.59□□□□□ -0.23
SSPN-204ENST00000535504 ZNF625Q96I27 306 aaPredicted RBP13.59□□□□□ -0.23
SSPN-204ENST00000535504 IGKCP01834 107 aa13.58□□□□□ -0.24
SSPN-204ENST00000535504 PSORS1C2Q9UIG4 136 aa13.58□□□□□ -0.24
SSPN-204ENST00000535504 KRTAP29-1A8MX34 341 aaPredicted RBP13.57□□□□□ -0.24
SSPN-204ENST00000535504 LINC00587B1AMM8 73 aa13.57□□□□□ -0.24
SSPN-204ENST00000535504 NKAPP1Q8N9T2 125 aa13.57□□□□□ -0.24
SSPN-204ENST00000535504 HNRNPA3P51991 378 aaKnown RBP13.56□□□□□ -0.24
SSPN-204ENST00000535504 HERV-K104P63124 156 aa13.56□□□□□ -0.24
SSPN-204ENST00000535504 SPINK6Q6UWN8 80 aa13.56□□□□□ -0.24
SSPN-204ENST00000535504 PLEKHB2Q96CS7 222 aa13.56□□□□□ -0.24
SSPN-204ENST00000535504 MYMXA0A1B0GTQ4 84 aa13.55□□□□□ -0.24
SSPN-204ENST00000535504 LINC00158P58513 81 aa13.55□□□□□ -0.24
SSPN-204ENST00000535504 MEIG1Q5JSS6 88 aa13.55□□□□□ -0.24
SSPN-204ENST00000535504 TP73-AS1Q9UF72 201 aa13.55□□□□□ -0.24
SSPN-204ENST00000535504 C22orf24Q9Y442 160 aa13.55□□□□□ -0.24
SSPN-204ENST00000535504 DMBT1Q9UGM3 2413 aaPredicted RBP13.54□□□□□ -0.24
SSPN-204ENST00000535504 SERTAD4-AS1Q5TG53 156 aa13.54□□□□□ -0.24
SSPN-204ENST00000535504 REG3GQ6UW15 175 aa13.53□□□□□ -0.24
SSPN-204ENST00000535504 MRPL55Q7Z7F7 128 aaKnown RBP13.53□□□□□ -0.24
SSPN-204ENST00000535504 PMCHL2Q9BQD1 86 aa13.53□□□□□ -0.24
SSPN-204ENST00000535504 NDUFA12Q9UI09 145 aa13.53□□□□□ -0.24
SSPN-204ENST00000535504 PLA2G2DQ9UNK4 145 aa13.53□□□□□ -0.24
SSPN-204ENST00000535504 SYS1-DBNDD2H3BUS1 97 aa13.52□□□□□ -0.25
SSPN-204ENST00000535504 LEPROTO15243 131 aa13.52□□□□□ -0.25
SSPN-204ENST00000535504 LGALS3P17931 250 aaKnown RBP13.52□□□□□ -0.25
SSPN-204ENST00000535504 RPL24P83731 157 aaKnown RBP13.52□□□□□ -0.25
SSPN-204ENST00000535504 COA6Q5JTJ3 125 aaKnown RBP13.51□□□□□ -0.25
SSPN-204ENST00000535504 PET117Q6UWS5 81 aa13.5□□□□□ -0.25
SSPN-204ENST00000535504 SND1-IT1Q9HBX3 110 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms