RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 Q6ZRU5 148 aa10.07□□□□□ -0.8
CTTN-215ENST00000533931 LINC00526Q96FQ7 95 aa10.07□□□□□ -0.8
CTTN-215ENST00000533931 TOMM7Q9P0U1 55 aa10.07□□□□□ -0.8
CTTN-215ENST00000533931 HERVK_113P61574 105 aa10.06□□□□□ -0.8
CTTN-215ENST00000533931 SDIM1Q6ZPB5 146 aa10.05□□□□□ -0.8
CTTN-215ENST00000533931 PMCHL2Q9BQD1 86 aa10.05□□□□□ -0.8
CTTN-215ENST00000533931 TLX1NBP0CAT3 122 aa10.04□□□□□ -0.8
CTTN-215ENST00000533931 FUSP35637 526 aaKnown RBP eCLIP10.04□□□□□ -0.8
CTTN-215ENST00000533931 KRTAP10-1P60331 282 aa10.04□□□□□ -0.8
CTTN-215ENST00000533931 Q6ZSA8 131 aa10.04□□□□□ -0.8
CTTN-215ENST00000533931 UNQ6190/PRO20217Q6UXQ8 127 aa10.03□□□□□ -0.8
CTTN-215ENST00000533931 PLEKHB2Q96CS7 222 aa10.03□□□□□ -0.8
CTTN-215ENST00000533931 C6orf48Q9UBA6 75 aa10.03□□□□□ -0.8
CTTN-215ENST00000533931 LOC107984640A0A0U1RRK4 108 aa10.02□□□□□ -0.81
CTTN-215ENST00000533931 C10orf25Q5T742 122 aa10.02□□□□□ -0.81
CTTN-215ENST00000533931 C2orf82Q6UX34 121 aa10.02□□□□□ -0.81
CTTN-215ENST00000533931 LINC00474Q9P2X8 69 aa10.02□□□□□ -0.81
CTTN-215ENST00000533931 E9PLD3 99 aa10.01□□□□□ -0.81
CTTN-215ENST00000533931 LEPROTO15243 131 aa10.01□□□□□ -0.81
CTTN-215ENST00000533931 TMA7Q9Y2S6 64 aaKnown RBP10.01□□□□□ -0.81
CTTN-215ENST00000533931 DNAH5Q8TE73 4624 aa10.01□□□□□ -0.81
CTTN-215ENST00000533931 BIRC6Q9NR09 4857 aa10□□□□□ -0.81
CTTN-215ENST00000533931 CDK2AP2O75956 126 aa10□□□□□ -0.81
CTTN-215ENST00000533931 CIRBPQ14011 172 aaKnown RBP10□□□□□ -0.81
CTTN-215ENST00000533931 LINC01620Q4KN68 170 aa10□□□□□ -0.81
CTTN-215ENST00000533931 ZNF625Q96I27 306 aaPredicted RBP10□□□□□ -0.81
CTTN-215ENST00000533931 DYNC1H1Q14204 4646 aaKnown RBP10□□□□□ -0.81
CTTN-215ENST00000533931 NMUP48645 174 aa9.99□□□□□ -0.81
CTTN-215ENST00000533931 NDUFC2-KCTD14E9PQ53 114 aa9.98□□□□□ -0.81
CTTN-215ENST00000533931 J3QQQ9 107 aa9.98□□□□□ -0.81
CTTN-215ENST00000533931 HERV-K104P63124 156 aa9.98□□□□□ -0.81
CTTN-215ENST00000533931 COX17Q14061 63 aa9.98□□□□□ -0.81
CTTN-215ENST00000533931 PTTG1IPP53801 180 aa9.97□□□□□ -0.81
CTTN-215ENST00000533931 MYMXA0A1B0GTQ4 84 aa9.96□□□□□ -0.82
CTTN-215ENST00000533931 LINC00587B1AMM8 73 aa9.96□□□□□ -0.82
CTTN-215ENST00000533931 SPACA4Q8TDM5 124 aa9.96□□□□□ -0.82
CTTN-215ENST00000533931 NDUFA12Q9UI09 145 aa9.96□□□□□ -0.82
CTTN-215ENST00000533931 A0A096LNI7 61 aa9.95□□□□□ -0.82
CTTN-215ENST00000533931 LGALS3P17931 250 aaKnown RBP9.95□□□□□ -0.82
CTTN-215ENST00000533931 STPG4Q8N801 248 aa9.95□□□□□ -0.82
CTTN-215ENST00000533931 LRP1BQ9NZR2 4599 aa9.95□□□□□ -0.82
CTTN-215ENST00000533931 TSPEAR-AS2P59090 65 aa9.94□□□□□ -0.82
CTTN-215ENST00000533931 RPL18AQ02543 176 aaKnown RBP9.94□□□□□ -0.82
CTTN-215ENST00000533931 FAM30AQ9NZY2 134 aa9.94□□□□□ -0.82
CTTN-215ENST00000533931 ERG28Q9UKR5 140 aa9.94□□□□□ -0.82
CTTN-215ENST00000533931 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.94□□□□□ -0.82
CTTN-215ENST00000533931 SCGB1D1O95968 90 aa9.93□□□□□ -0.82
CTTN-215ENST00000533931 JOSD1Q15040 202 aaPredicted RBP9.93□□□□□ -0.82
CTTN-215ENST00000533931 C9orf116Q5BN46 136 aaPredicted RBP9.93□□□□□ -0.82
CTTN-215ENST00000533931 Q6ZRP5 223 aa9.93□□□□□ -0.82
CTTN-215ENST00000533931 HSBP1L1C9JCN9 74 aa9.92□□□□□ -0.82
CTTN-215ENST00000533931 ATOH7Q8N100 152 aa9.92□□□□□ -0.82
CTTN-215ENST00000533931 IGKV2-24A0A0C4DH68 120 aa9.91□□□□□ -0.82
CTTN-215ENST00000533931 EPM2AB3EWF7 344 aa9.91□□□□□ -0.82
CTTN-215ENST00000533931 XGP55808 180 aa9.91□□□□□ -0.82
CTTN-215ENST00000533931 GAGE2BQ13066 116 aa9.91□□□□□ -0.82
CTTN-215ENST00000533931 PLAC8Q9NZF1 115 aa9.91□□□□□ -0.82
CTTN-215ENST00000533931 PANO1I0J062 215 aa9.9□□□□□ -0.82
CTTN-215ENST00000533931 CHTF8P0CG12 524 aa9.9□□□□□ -0.82
CTTN-215ENST00000533931 MAJINQ3KP22 176 aa9.9□□□□□ -0.82
CTTN-215ENST00000533931 ANKRD39Q53RE8 183 aa9.9□□□□□ -0.82
CTTN-215ENST00000533931 SCXQ7RTU7 201 aa9.9□□□□□ -0.82
CTTN-215ENST00000533931 IGKV2D-26A0A0A0MRZ7 120 aa9.89□□□□□ -0.83
CTTN-215ENST00000533931 CIRBP-AS1Q8TBR5 109 aa9.89□□□□□ -0.83
CTTN-215ENST00000533931 A0A087WYN8 130 aa9.88□□□□□ -0.83
CTTN-215ENST00000533931 DNAH8Q96JB1 4490 aa9.88□□□□□ -0.83
CTTN-215ENST00000533931 PFN2P35080 140 aa9.87□□□□□ -0.83
CTTN-215ENST00000533931 GAGE2EQ4V326 116 aa9.87□□□□□ -0.83
CTTN-215ENST00000533931 MEIG1Q5JSS6 88 aa9.87□□□□□ -0.83
CTTN-215ENST00000533931 GAGE2DQ9UEU5 116 aa9.87□□□□□ -0.83
CTTN-215ENST00000533931 ZNF815PA8K554 130 aa9.86□□□□□ -0.83
CTTN-215ENST00000533931 TIMM17BO60830 172 aa9.86□□□□□ -0.83
CTTN-215ENST00000533931 C9orf129Q5T035 196 aaKnown RBP9.86□□□□□ -0.83
CTTN-215ENST00000533931 DPH3Q96FX2 82 aa9.86□□□□□ -0.83
CTTN-215ENST00000533931 PLA2G2DQ9UNK4 145 aa9.86□□□□□ -0.83
CTTN-215ENST00000533931 A0A0J9YXY3 114 aa9.85□□□□□ -0.83
CTTN-215ENST00000533931 LINC00158P58513 81 aa9.85□□□□□ -0.83
CTTN-215ENST00000533931 APOBP04114 4563 aaKnown RBP9.85□□□□□ -0.83
CTTN-215ENST00000533931 SMIM13P0DJ93 91 aa9.84□□□□□ -0.83
CTTN-215ENST00000533931 SND1-IT1Q9HBX3 110 aa9.84□□□□□ -0.83
CTTN-215ENST00000533931 PYY3Q5JQD4 70 aa9.83□□□□□ -0.84
CTTN-215ENST00000533931 XAGE1AQ9HD64 81 aa9.83□□□□□ -0.84
CTTN-215ENST00000533931 LOC107984156A0A0G2JMH3 177 aa9.82□□□□□ -0.84
CTTN-215ENST00000533931 A0A1W2PNN7 141 aa9.82□□□□□ -0.84
CTTN-215ENST00000533931 ARL17AQ8IVW1 177 aa9.82□□□□□ -0.84
CTTN-215ENST00000533931 VAMP8Q9BV40 100 aa9.82□□□□□ -0.84
CTTN-215ENST00000533931 TP73-AS1Q9UF72 201 aa9.82□□□□□ -0.84
CTTN-215ENST00000533931 IGLV5-37A0A075B6J1 123 aa9.81□□□□□ -0.84
CTTN-215ENST00000533931 MIR7-3HGQ8N6C7 128 aa9.81□□□□□ -0.84
CTTN-215ENST00000533931 RYR1P21817 5038 aa9.8□□□□□ -0.84
CTTN-215ENST00000533931 PCP2Q8IVA1 136 aa9.8□□□□□ -0.84
CTTN-215ENST00000533931 TTTY13Q9BZ97 58 aa9.8□□□□□ -0.84
CTTN-215ENST00000533931 KIAA1109Q2LD37 5005 aa9.79□□□□□ -0.84
CTTN-215ENST00000533931 TMEM238C9JI98 176 aa9.79□□□□□ -0.84
CTTN-215ENST00000533931 DLEU1O43261 78 aa9.79□□□□□ -0.84
CTTN-215ENST00000533931 RPL24P83731 157 aaKnown RBP9.79□□□□□ -0.84
CTTN-215ENST00000533931 SCGB1D4Q6XE38 83 aa9.79□□□□□ -0.84
CTTN-215ENST00000533931 Q6ZVH6 145 aa9.79□□□□□ -0.84
CTTN-215ENST00000533931 C7orf33Q8WU49 177 aa9.79□□□□□ -0.84
CTTN-215ENST00000533931 LITAFQ99732 161 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms