RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 PLAC8Q9NZF1 115 aa13.35□□□□□ -0.27
VPS51-211ENST00000533487 TOMM7Q9P0U1 55 aa13.35□□□□□ -0.27
VPS51-211ENST00000533487 CHTOPQ9Y3Y2 248 aaKnown RBP13.35□□□□□ -0.27
VPS51-211ENST00000533487 A0A096LNI7 61 aa13.34□□□□□ -0.27
VPS51-211ENST00000533487 PTTG1IPP53801 180 aa13.34□□□□□ -0.27
VPS51-211ENST00000533487 UNQ6190/PRO20217Q6UXQ8 127 aa13.34□□□□□ -0.27
VPS51-211ENST00000533487 F8VRH5 84 aa13.33□□□□□ -0.28
VPS51-211ENST00000533487 PANO1I0J062 215 aa13.33□□□□□ -0.28
VPS51-211ENST00000533487 HAMPP81172 84 aa13.33□□□□□ -0.28
VPS51-211ENST00000533487 MAJINQ3KP22 176 aa13.33□□□□□ -0.28
VPS51-211ENST00000533487 A0A087WYN8 130 aa13.32□□□□□ -0.28
VPS51-211ENST00000533487 IGKV2-24A0A0C4DH68 120 aa13.32□□□□□ -0.28
VPS51-211ENST00000533487 SMR3BP02814 79 aaPredicted RBP13.32□□□□□ -0.28
VPS51-211ENST00000533487 PLA2G1BP04054 148 aaKnown RBP13.32□□□□□ -0.28
VPS51-211ENST00000533487 CHTF8P0CG12 524 aa13.32□□□□□ -0.28
VPS51-211ENST00000533487 ZNF22P17026 224 aaPredicted RBP13.32□□□□□ -0.28
VPS51-211ENST00000533487 Q5VSD8 79 aa13.32□□□□□ -0.28
VPS51-211ENST00000533487 COX7B2Q8TF08 81 aa13.32□□□□□ -0.28
VPS51-211ENST00000533487 C6orf48Q9UBA6 75 aa13.32□□□□□ -0.28
VPS51-211ENST00000533487 IGLV5-39A0A0G2JS06 123 aa13.31□□□□□ -0.28
VPS51-211ENST00000533487 COA6Q5JTJ3 125 aaKnown RBP13.31□□□□□ -0.28
VPS51-211ENST00000533487 C10orf25Q5T742 122 aa13.31□□□□□ -0.28
VPS51-211ENST00000533487 SFTA2Q6UW10 78 aa13.31□□□□□ -0.28
VPS51-211ENST00000533487 LINC00528Q8N1L1 170 aa13.31□□□□□ -0.28
VPS51-211ENST00000533487 C11orf86A6NJI1 115 aa13.3□□□□□ -0.28
VPS51-211ENST00000533487 NUPR1O60356 82 aa13.3□□□□□ -0.28
VPS51-211ENST00000533487 C2orf82Q6UX34 121 aa13.3□□□□□ -0.28
VPS51-211ENST00000533487 SPINK8P0C7L1 97 aa13.29□□□□□ -0.28
VPS51-211ENST00000533487 RPL18AQ02543 176 aaKnown RBP13.29□□□□□ -0.28
VPS51-211ENST00000533487 GAGE2BQ13066 116 aa13.29□□□□□ -0.28
VPS51-211ENST00000533487 STPG4Q8N801 248 aa13.29□□□□□ -0.28
VPS51-211ENST00000533487 NDUFC2-KCTD14E9PQ53 114 aa13.28□□□□□ -0.28
VPS51-211ENST00000533487 TMEM170BQ5T4T1 132 aa13.28□□□□□ -0.28
VPS51-211ENST00000533487 MAP1LC3CQ9BXW4 147 aa13.27□□□□□ -0.29
VPS51-211ENST00000533487 PLNP26678 52 aa13.26□□□□□ -0.29
VPS51-211ENST00000533487 ODF1Q14990 250 aa13.26□□□□□ -0.29
VPS51-211ENST00000533487 KRTAP17-1Q9BYP8 105 aa13.26□□□□□ -0.29
VPS51-211ENST00000533487 FABP4P15090 132 aa13.25□□□□□ -0.29
VPS51-211ENST00000533487 C7orf33Q8WU49 177 aa13.25□□□□□ -0.29
VPS51-211ENST00000533487 Q6ZRP5 223 aa13.24□□□□□ -0.29
VPS51-211ENST00000533487 TMEM223A0PJW6 202 aa13.22□□□□□ -0.29
VPS51-211ENST00000533487 KRTAP4-5Q9BYR2 181 aa13.22□□□□□ -0.29
VPS51-211ENST00000533487 H0Y8G0 127 aa13.2□□□□□ -0.3
VPS51-211ENST00000533487 DPM2O94777 84 aa13.2□□□□□ -0.3
VPS51-211ENST00000533487 RPL37AP61513 92 aaKnown RBP13.19□□□□□ -0.3
VPS51-211ENST00000533487 COX17Q14061 63 aa13.19□□□□□ -0.3
VPS51-211ENST00000533487 C9orf116Q5BN46 136 aaPredicted RBP13.19□□□□□ -0.3
VPS51-211ENST00000533487 GAGE2EQ4V326 116 aa13.18□□□□□ -0.3
VPS51-211ENST00000533487 GAGE2DQ9UEU5 116 aa13.18□□□□□ -0.3
VPS51-211ENST00000533487 SYS1-DBNDD2H3BUS1 97 aa13.17□□□□□ -0.3
VPS51-211ENST00000533487 IGKCP01834 107 aa13.17□□□□□ -0.3
VPS51-211ENST00000533487 HERVK_113P61574 105 aa13.16□□□□□ -0.3
VPS51-211ENST00000533487 PET117Q6UWS5 81 aa13.16□□□□□ -0.3
VPS51-211ENST00000533487 A0A1W2PNN7 141 aa13.15□□□□□ -0.3
VPS51-211ENST00000533487 INAFM2P0DMQ5 153 aa13.15□□□□□ -0.3
VPS51-211ENST00000533487 FAT1Q14517 4588 aa13.15□□□□□ -0.3
VPS51-211ENST00000533487 ZNF625Q96I27 306 aaPredicted RBP13.14□□□□□ -0.31
VPS51-211ENST00000533487 LINC00587B1AMM8 73 aa13.13□□□□□ -0.31
VPS51-211ENST00000533487 AKR1D1P51857 326 aa13.13□□□□□ -0.31
VPS51-211ENST00000533487 KRTAP10-4P60372 401 aaPredicted RBP13.13□□□□□ -0.31
VPS51-211ENST00000533487 PLEKHB2Q96CS7 222 aa13.13□□□□□ -0.31
VPS51-211ENST00000533487 HERV-K104P63124 156 aa13.12□□□□□ -0.31
VPS51-211ENST00000533487 C9orf129Q5T035 196 aaKnown RBP13.12□□□□□ -0.31
VPS51-211ENST00000533487 LINC01545Q5VT33 79 aa13.12□□□□□ -0.31
VPS51-211ENST00000533487 ERG28Q9UKR5 140 aa13.12□□□□□ -0.31
VPS51-211ENST00000533487 SRRM2Q9UQ35 2752 aaKnown RBP13.11□□□□□ -0.31
VPS51-211ENST00000533487 LEPROTO15243 131 aa13.1□□□□□ -0.31
VPS51-211ENST00000533487 PLA2G2DQ9UNK4 145 aa13.1□□□□□ -0.31
VPS51-211ENST00000533487 NMUP48645 174 aa13.09□□□□□ -0.31
VPS51-211ENST00000533487 VPS13BQ7Z7G8 4022 aa13.09□□□□□ -0.31
VPS51-211ENST00000533487 MYMXA0A1B0GTQ4 84 aa13.08□□□□□ -0.32
VPS51-211ENST00000533487 S100A6P06703 90 aa13.08□□□□□ -0.32
VPS51-211ENST00000533487 C3orf79P0CE67 100 aa13.08□□□□□ -0.32
VPS51-211ENST00000533487 TP73-AS1Q9UF72 201 aa13.08□□□□□ -0.32
VPS51-211ENST00000533487 C20orf202A1L168 122 aa13.07□□□□□ -0.32
VPS51-211ENST00000533487 FAM19A5Q7Z5A7 132 aaPredicted RBP13.07□□□□□ -0.32
VPS51-211ENST00000533487 PMCHL2Q9BQD1 86 aa13.07□□□□□ -0.32
VPS51-211ENST00000533487 XAGE1AQ9HD64 81 aa13.07□□□□□ -0.32
VPS51-211ENST00000533487 NDUFA12Q9UI09 145 aa13.07□□□□□ -0.32
VPS51-211ENST00000533487 FAM168BA1KXE4 195 aa13.06□□□□□ -0.32
VPS51-211ENST00000533487 M0QXV9 152 aa13.06□□□□□ -0.32
VPS51-211ENST00000533487 PFN2P35080 140 aa13.06□□□□□ -0.32
VPS51-211ENST00000533487 PRR3P79522 188 aaKnown RBP13.06□□□□□ -0.32
VPS51-211ENST00000533487 J3QQQ9 107 aa13.05□□□□□ -0.32
VPS51-211ENST00000533487 LBHQ53QV2 105 aaPredicted RBP13.05□□□□□ -0.32
VPS51-211ENST00000533487 E9PLD3 99 aa13.04□□□□□ -0.32
VPS51-211ENST00000533487 S100A2P29034 98 aa13.04□□□□□ -0.32
VPS51-211ENST00000533487 KRTDAPP60985 99 aa13.04□□□□□ -0.32
VPS51-211ENST00000533487 LGALS3P17931 250 aaKnown RBP13.03□□□□□ -0.32
VPS51-211ENST00000533487 PHF5AQ7RTV0 110 aaKnown RBP13.03□□□□□ -0.32
VPS51-211ENST00000533487 KRTAP7-1Q8IUC3 87 aa13.03□□□□□ -0.32
VPS51-211ENST00000533487 IGLV5-37A0A075B6J1 123 aa13.02□□□□□ -0.33
VPS51-211ENST00000533487 HIST3H2BBQ8N257 126 aa13.02□□□□□ -0.33
VPS51-211ENST00000533487 LINC00158P58513 81 aa13.01□□□□□ -0.33
VPS51-211ENST00000533487 SND1-IT1Q9HBX3 110 aa13.01□□□□□ -0.33
VPS51-211ENST00000533487 C22orf24Q9Y442 160 aa13.01□□□□□ -0.33
VPS51-211ENST00000533487 RPL24P83731 157 aaKnown RBP13□□□□□ -0.33
VPS51-211ENST00000533487 MEIG1Q5JSS6 88 aa13□□□□□ -0.33
VPS51-211ENST00000533487 SERTAD4-AS1Q5TG53 156 aa13□□□□□ -0.33
VPS51-211ENST00000533487 UBE2BP63146 152 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms