RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 C11orf1Q9H5F2 150 aa3.46□□□□□ -1.86
SVIP-204ENST00000530199 A0A1B0GXF2 115 aa3.45□□□□□ -1.86
SVIP-204ENST00000530199 M0R381 172 aa3.45□□□□□ -1.86
SVIP-204ENST00000530199 UBE2L6O14933 153 aa3.45□□□□□ -1.86
SVIP-204ENST00000530199 FGF7P21781 194 aa3.45□□□□□ -1.86
SVIP-204ENST00000530199 XCL1P47992 114 aa3.45□□□□□ -1.86
SVIP-204ENST00000530199 S100A12P80511 92 aa3.45□□□□□ -1.86
SVIP-204ENST00000530199 TMEM128Q5BJH2 165 aa3.45□□□□□ -1.86
SVIP-204ENST00000530199 IGFL1Q6UW32 110 aa3.45□□□□□ -1.86
SVIP-204ENST00000530199 OR2D3Q8NGH3 330 aa3.45□□□□□ -1.86
SVIP-204ENST00000530199 FMC1Q96HJ9 113 aa3.45□□□□□ -1.86
SVIP-204ENST00000530199 IMMP2LQ96T52 175 aa3.45□□□□□ -1.86
SVIP-204ENST00000530199 NDUFA12Q9UI09 145 aa3.45□□□□□ -1.86
SVIP-204ENST00000530199 CCL25O15444 150 aa3.44□□□□□ -1.86
SVIP-204ENST00000530199 BCE1O60756 84 aa3.44□□□□□ -1.86
SVIP-204ENST00000530199 MT1FP04733 61 aa3.44□□□□□ -1.86
SVIP-204ENST00000530199 TPT1P13693 172 aaKnown RBP3.44□□□□□ -1.86
SVIP-204ENST00000530199 KRTAP5-9P26371 169 aa3.44□□□□□ -1.86
SVIP-204ENST00000530199 UBE2L3P68036 154 aaKnown RBP3.44□□□□□ -1.86
SVIP-204ENST00000530199 BAXQ07812 192 aa3.44□□□□□ -1.86
SVIP-204ENST00000530199 IAH1Q2TAA2 248 aaPredicted RBP3.44□□□□□ -1.86
SVIP-204ENST00000530199 SMIM15Q7Z3B0 74 aa3.44□□□□□ -1.86
SVIP-204ENST00000530199 STOML3Q8TAV4 291 aa3.44□□□□□ -1.86
SVIP-204ENST00000530199 UQCC1Q9NVA1 299 aa3.44□□□□□ -1.86
SVIP-204ENST00000530199 MRPL35Q9NZE8 188 aaKnown RBP3.44□□□□□ -1.86
SVIP-204ENST00000530199 RBM12B-AS1Q9P1G2 102 aa3.44□□□□□ -1.86
SVIP-204ENST00000530199 FABP5P3A8MUU1 101 aa3.43□□□□□ -1.86
SVIP-204ENST00000530199 B4DEV8 164 aa3.43□□□□□ -1.86
SVIP-204ENST00000530199 AKAIN1P0CW23 69 aa3.43□□□□□ -1.86
SVIP-204ENST00000530199 C4orf26Q17RF5 130 aa3.43□□□□□ -1.86
SVIP-204ENST00000530199 KRTAP2-1Q9BYU5 128 aa3.43□□□□□ -1.86
SVIP-204ENST00000530199 MAP1LC3AQ9H492 121 aa3.43□□□□□ -1.86
SVIP-204ENST00000530199 SCP2D1Q9UJQ7 156 aa3.43□□□□□ -1.86
SVIP-204ENST00000530199 LINC00959A0A1B0GUT2 108 aa3.42□□□□□ -1.86
SVIP-204ENST00000530199 CXorf1O96002 111 aa3.42□□□□□ -1.86
SVIP-204ENST00000530199 SPINK1P00995 79 aa3.42□□□□□ -1.86
SVIP-204ENST00000530199 FA2HQ7L5A8 372 aa3.42□□□□□ -1.86
SVIP-204ENST00000530199 FAM19A2Q8N3H0 131 aa3.42□□□□□ -1.86
SVIP-204ENST00000530199 GATD1Q8NB37 220 aa3.42□□□□□ -1.86
SVIP-204ENST00000530199 YPEL4Q96NS1 127 aa3.42□□□□□ -1.86
SVIP-204ENST00000530199 ZNF706Q9Y5V0 76 aaPredicted RBP3.42□□□□□ -1.86
SVIP-204ENST00000530199 ALG5Q9Y673 324 aa3.42□□□□□ -1.86
SVIP-204ENST00000530199 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
SVIP-204ENST00000530199 UBE2L5PA0A1B0GUS4 154 aa3.41□□□□□ -1.86
SVIP-204ENST00000530199 G3V3Q6 166 aa3.41□□□□□ -1.86
SVIP-204ENST00000530199 SFT2D2O95562 160 aa3.41□□□□□ -1.86
SVIP-204ENST00000530199 RPL12P30050 165 aaKnown RBP3.41□□□□□ -1.86
SVIP-204ENST00000530199 TMBIM6P55061 237 aa3.41□□□□□ -1.86
SVIP-204ENST00000530199 GNG5P63218 68 aa3.41□□□□□ -1.86
SVIP-204ENST00000530199 MRPS10P82664 201 aaKnown RBP3.41□□□□□ -1.86
SVIP-204ENST00000530199 FLI1Q01543 452 aaPredicted RBP3.41□□□□□ -1.86
SVIP-204ENST00000530199 KRTAP13-1Q8IUC0 172 aa3.41□□□□□ -1.86
SVIP-204ENST00000530199 NPCDR1Q9BY65 106 aa3.41□□□□□ -1.86
SVIP-204ENST00000530199 SMDT1Q9H4I9 107 aa3.41□□□□□ -1.86
SVIP-204ENST00000530199 GRIFINA4D1Z8 144 aa3.4□□□□□ -1.87
SVIP-204ENST00000530199 M0QY20 66 aa3.4□□□□□ -1.87
SVIP-204ENST00000530199 TCRAP04437 139 aa3.4□□□□□ -1.87
SVIP-204ENST00000530199 SULT1A1P50225 295 aa3.4□□□□□ -1.87
SVIP-204ENST00000530199 SPINT4Q6UDR6 99 aa3.4□□□□□ -1.87
SVIP-204ENST00000530199 C3orf22Q8N5N4 141 aa3.4□□□□□ -1.87
SVIP-204ENST00000530199 SMIM12Q96EX1 92 aa3.4□□□□□ -1.87
SVIP-204ENST00000530199 ZNF471Q9BX82 626 aaPredicted RBP3.4□□□□□ -1.87
SVIP-204ENST00000530199 GSKIPQ9P0R6 139 aa3.4□□□□□ -1.87
SVIP-204ENST00000530199 ZNF25P17030 456 aaPredicted RBP3.39□□□□□ -1.87
SVIP-204ENST00000530199 S100A11P31949 105 aa3.39□□□□□ -1.87
SVIP-204ENST00000530199 RPS29P62273 56 aaKnown RBP3.39□□□□□ -1.87
SVIP-204ENST00000530199 HBG1P69891 147 aa3.39□□□□□ -1.87
SVIP-204ENST00000530199 HBG2P69892 147 aa3.39□□□□□ -1.87
SVIP-204ENST00000530199 TMEM241Q24JQ0 296 aa3.39□□□□□ -1.87
SVIP-204ENST00000530199 KHDC3LQ587J8 217 aa3.39□□□□□ -1.87
SVIP-204ENST00000530199 AMMECR1LQ6DCA0 310 aa3.39□□□□□ -1.87
SVIP-204ENST00000530199 SLC51BQ86UW2 128 aa3.39□□□□□ -1.87
SVIP-204ENST00000530199 SLC25A21Q9BQT8 299 aaPredicted RBP3.39□□□□□ -1.87
SVIP-204ENST00000530199 COX7A2LO14548 114 aa3.38□□□□□ -1.87
SVIP-204ENST00000530199 RGS5O15539 181 aa3.38□□□□□ -1.87
SVIP-204ENST00000530199 CST7O76096 145 aa3.38□□□□□ -1.87
SVIP-204ENST00000530199 CRIP1P50238 77 aa3.38□□□□□ -1.87
SVIP-204ENST00000530199 TAS2R45P59539 299 aa3.38□□□□□ -1.87
SVIP-204ENST00000530199 PPP1R1AQ13522 171 aa3.38□□□□□ -1.87
SVIP-204ENST00000530199 C5orf17Q8NAS9 161 aa3.38□□□□□ -1.87
SVIP-204ENST00000530199 SMIM4Q8WVI0 70 aa3.38□□□□□ -1.87
SVIP-204ENST00000530199 C22orf24Q9Y442 160 aa3.38□□□□□ -1.87
SVIP-204ENST00000530199 A0A1B0GV72 72 aa3.37□□□□□ -1.87
SVIP-204ENST00000530199 FAM25AB3EWG3 89 aa3.37□□□□□ -1.87
SVIP-204ENST00000530199 FAM25CB3EWG5 89 aa3.37□□□□□ -1.87
SVIP-204ENST00000530199 FAM25GB3EWG6 89 aa3.37□□□□□ -1.87
SVIP-204ENST00000530199 KRTAP10-10P60014 251 aa3.37□□□□□ -1.87
SVIP-204ENST00000530199 SPAG11BQ08648 103 aa3.37□□□□□ -1.87
SVIP-204ENST00000530199 SMAGPQ0VAQ4 97 aa3.37□□□□□ -1.87
SVIP-204ENST00000530199 COMMD7Q86VX2 200 aa3.37□□□□□ -1.87
SVIP-204ENST00000530199 OR10AG1Q8NH19 301 aa3.37□□□□□ -1.87
SVIP-204ENST00000530199 SEC22CQ9BRL7 303 aa3.37□□□□□ -1.87
SVIP-204ENST00000530199 ANAPC13Q9BS18 74 aa3.37□□□□□ -1.87
SVIP-204ENST00000530199 BATF3Q9NR55 127 aa3.37□□□□□ -1.87
SVIP-204ENST00000530199 KCNIP2Q9NS61 270 aa3.37□□□□□ -1.87
SVIP-204ENST00000530199 C6orf48Q9UBA6 75 aa3.37□□□□□ -1.87
SVIP-204ENST00000530199 NDUFA1O15239 70 aa3.36□□□□□ -1.87
SVIP-204ENST00000530199 SCGB1C2P0DMR2 95 aa3.36□□□□□ -1.87
SVIP-204ENST00000530199 TRIQKQ629K1 86 aa3.36□□□□□ -1.87
SVIP-204ENST00000530199 OR10D4PQ8NGN7 298 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms