RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 E9PLD3 99 aa4.09□□□□□ -1.75
MACF1-228ENST00000528611 PRSS2P07478 247 aa4.09□□□□□ -1.75
MACF1-228ENST00000528611 HERV-K104P63124 156 aa4.09□□□□□ -1.75
MACF1-228ENST00000528611 COX17Q14061 63 aa4.09□□□□□ -1.75
MACF1-228ENST00000528611 C6orf226Q5I0X4 101 aa4.09□□□□□ -1.75
MACF1-228ENST00000528611 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.75
MACF1-228ENST00000528611 KMT2AQ03164 3969 aa4.09□□□□□ -1.75
MACF1-228ENST00000528611 SACSQ9NZJ4 4579 aa4.08□□□□□ -1.76
MACF1-228ENST00000528611 NDUFA1O15239 70 aa4.08□□□□□ -1.76
MACF1-228ENST00000528611 LEPROTO15243 131 aa4.08□□□□□ -1.76
MACF1-228ENST00000528611 GHRHP01286 108 aa4.08□□□□□ -1.76
MACF1-228ENST00000528611 TLX1NBP0CAT3 122 aa4.08□□□□□ -1.76
MACF1-228ENST00000528611 KIAA0087Q14695 138 aa4.08□□□□□ -1.76
MACF1-228ENST00000528611 ZC2HC1BQ5TFG8 222 aa4.08□□□□□ -1.76
MACF1-228ENST00000528611 C5orf38Q86SI9 138 aa4.08□□□□□ -1.76
MACF1-228ENST00000528611 C15orf56Q8N910 161 aa4.08□□□□□ -1.76
MACF1-228ENST00000528611 ORAOV1Q8WV07 137 aa4.08□□□□□ -1.76
MACF1-228ENST00000528611 LINC00474Q9P2X8 69 aa4.08□□□□□ -1.76
MACF1-228ENST00000528611 KMT2CQ8NEZ4 4911 aaKnown RBP4.07□□□□□ -1.76
MACF1-228ENST00000528611 hDV102S1A0JD36 115 aa4.07□□□□□ -1.76
MACF1-228ENST00000528611 CKS1BP61024 79 aa4.07□□□□□ -1.76
MACF1-228ENST00000528611 SPAG11BQ08648 103 aa4.07□□□□□ -1.76
MACF1-228ENST00000528611 SYCNQ0VAF6 134 aa4.07□□□□□ -1.76
MACF1-228ENST00000528611 C9orf163Q8N9P6 203 aa4.07□□□□□ -1.76
MACF1-228ENST00000528611 COX7B2Q8TF08 81 aa4.07□□□□□ -1.76
MACF1-228ENST00000528611 PPDPFQ9H3Y8 114 aa4.07□□□□□ -1.76
MACF1-228ENST00000528611 TMA7Q9Y2S6 64 aaKnown RBP4.07□□□□□ -1.76
MACF1-228ENST00000528611 MYMXA0A1B0GTQ4 84 aa4.06□□□□□ -1.76
MACF1-228ENST00000528611 H0Y8G0 127 aa4.06□□□□□ -1.76
MACF1-228ENST00000528611 J3QQQ9 107 aa4.06□□□□□ -1.76
MACF1-228ENST00000528611 SCGB1D1O95968 90 aa4.06□□□□□ -1.76
MACF1-228ENST00000528611 CAMK2N2Q96S95 79 aa4.06□□□□□ -1.76
MACF1-228ENST00000528611 A0A1B0GVY2 172 aa4.05□□□□□ -1.76
MACF1-228ENST00000528611 DLEU1O43261 78 aa4.05□□□□□ -1.76
MACF1-228ENST00000528611 SMIM6P0DI80 62 aa4.05□□□□□ -1.76
MACF1-228ENST00000528611 LGALS3P17931 250 aaKnown RBP4.05□□□□□ -1.76
MACF1-228ENST00000528611 CIRBPQ14011 172 aaKnown RBP4.05□□□□□ -1.76
MACF1-228ENST00000528611 Q6ZVH6 145 aa4.05□□□□□ -1.76
MACF1-228ENST00000528611 BOD1L2Q8IYS8 172 aa4.05□□□□□ -1.76
MACF1-228ENST00000528611 ZNF625Q96I27 306 aaPredicted RBP4.05□□□□□ -1.76
MACF1-228ENST00000528611 CARD19Q96LW7 228 aa4.05□□□□□ -1.76
MACF1-228ENST00000528611 IGLV5-52A0A0A0MRZ9 124 aa4.04□□□□□ -1.76
MACF1-228ENST00000528611 A0A0J9YXY3 114 aa4.04□□□□□ -1.76
MACF1-228ENST00000528611 LOC107984640A0A0U1RRK4 108 aa4.04□□□□□ -1.76
MACF1-228ENST00000528611 TIMM17BO60830 172 aa4.04□□□□□ -1.76
MACF1-228ENST00000528611 SPINK8P0C7L1 97 aa4.04□□□□□ -1.76
MACF1-228ENST00000528611 S100A12P80511 92 aa4.04□□□□□ -1.76
MACF1-228ENST00000528611 COPS9Q8WXC6 57 aa4.04□□□□□ -1.76
MACF1-228ENST00000528611 PMCHL2Q9BQD1 86 aa4.04□□□□□ -1.76
MACF1-228ENST00000528611 TOMM7Q9P0U1 55 aa4.04□□□□□ -1.76
MACF1-228ENST00000528611 NDUFA12Q9UI09 145 aa4.04□□□□□ -1.76
MACF1-228ENST00000528611 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.04□□□□□ -1.76
MACF1-228ENST00000528611 LOC107984156A0A0G2JMH3 177 aa4.03□□□□□ -1.76
MACF1-228ENST00000528611 C16orf90A8MZG2 172 aa4.03□□□□□ -1.76
MACF1-228ENST00000528611 NDUFC2-KCTD14E9PQ53 114 aa4.03□□□□□ -1.76
MACF1-228ENST00000528611 PTTG1IPP53801 180 aa4.03□□□□□ -1.76
MACF1-228ENST00000528611 PYY3Q5JQD4 70 aa4.03□□□□□ -1.76
MACF1-228ENST00000528611 ARL17AQ8IVW1 177 aa4.03□□□□□ -1.76
MACF1-228ENST00000528611 VAMP8Q9BV40 100 aa4.03□□□□□ -1.76
MACF1-228ENST00000528611 KRTAP9-3Q9BYQ3 159 aa4.03□□□□□ -1.76
MACF1-228ENST00000528611 DNAH2Q9P225 4427 aa4.02□□□□□ -1.77
MACF1-228ENST00000528611 RYR2Q92736 4967 aa4.02□□□□□ -1.77
MACF1-228ENST00000528611 DNAH17Q9UFH2 4485 aa4.02□□□□□ -1.77
MACF1-228ENST00000528611 EPM2AB3EWF7 344 aa4.02□□□□□ -1.77
MACF1-228ENST00000528611 SLPIP03973 132 aa4.02□□□□□ -1.77
MACF1-228ENST00000528611 WFDC2Q14508 124 aa4.02□□□□□ -1.77
MACF1-228ENST00000528611 HIGD2BQ4VC39 106 aa4.02□□□□□ -1.77
MACF1-228ENST00000528611 MEIG1Q5JSS6 88 aa4.02□□□□□ -1.77
MACF1-228ENST00000528611 SDIM1Q6ZPB5 146 aa4.02□□□□□ -1.77
MACF1-228ENST00000528611 Q6ZRU5 148 aa4.02□□□□□ -1.77
MACF1-228ENST00000528611 STPG4Q8N801 248 aa4.02□□□□□ -1.77
MACF1-228ENST00000528611 C6orf48Q9UBA6 75 aa4.02□□□□□ -1.77
MACF1-228ENST00000528611 ERG28Q9UKR5 140 aa4.02□□□□□ -1.77
MACF1-228ENST00000528611 PLA2G2DQ9UNK4 145 aa4.02□□□□□ -1.77
MACF1-228ENST00000528611 HYDINQ4G0P3 5121 aa4.01□□□□□ -1.77
MACF1-228ENST00000528611 FRAS1Q86XX4 4008 aa4.01□□□□□ -1.77
MACF1-228ENST00000528611 LOC105371267A0A1B0GV96 52 aa4.01□□□□□ -1.77
MACF1-228ENST00000528611 TMEM238C9JI98 176 aa4.01□□□□□ -1.77
MACF1-228ENST00000528611 LECT2O14960 151 aa4.01□□□□□ -1.77
MACF1-228ENST00000528611 COX8AP10176 69 aa4.01□□□□□ -1.77
MACF1-228ENST00000528611 IFITM1P13164 125 aa4.01□□□□□ -1.77
MACF1-228ENST00000528611 UNQ6190/PRO20217Q6UXQ8 127 aa4.01□□□□□ -1.77
MACF1-228ENST00000528611 Q6ZSA8 131 aa4.01□□□□□ -1.77
MACF1-228ENST00000528611 IGLV2-33A0A075B6J2 118 aaPredicted RBP4□□□□□ -1.77
MACF1-228ENST00000528611 ZNF815PA8K554 130 aa4□□□□□ -1.77
MACF1-228ENST00000528611 ANKRD39Q53RE8 183 aa4□□□□□ -1.77
MACF1-228ENST00000528611 C2orf82Q6UX34 121 aa4□□□□□ -1.77
MACF1-228ENST00000528611 SPANXB1Q9NS25 103 aaPredicted RBP4□□□□□ -1.77
MACF1-228ENST00000528611 HIGD1BQ9P298 99 aa4□□□□□ -1.77
MACF1-228ENST00000528611 CBY1Q9Y3M2 126 aa4□□□□□ -1.77
MACF1-228ENST00000528611 IGKV2D-26A0A0A0MRZ7 120 aa3.99□□□□□ -1.77
MACF1-228ENST00000528611 NDUFC2O95298 119 aa3.99□□□□□ -1.77
MACF1-228ENST00000528611 TSPEAR-AS2P59090 65 aa3.99□□□□□ -1.77
MACF1-228ENST00000528611 KRTAP10-2P60368 255 aa3.99□□□□□ -1.77
MACF1-228ENST00000528611 RPL24P83731 157 aaKnown RBP3.99□□□□□ -1.77
MACF1-228ENST00000528611 TAL2Q16559 108 aa3.99□□□□□ -1.77
MACF1-228ENST00000528611 SPATA45Q537H7 98 aa3.99□□□□□ -1.77
MACF1-228ENST00000528611 C10orf25Q5T742 122 aa3.99□□□□□ -1.77
MACF1-228ENST00000528611 SLC25A34Q6PIV7 304 aa3.99□□□□□ -1.77
MACF1-228ENST00000528611 SCGB1D4Q6XE38 83 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms