RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 PLA2G1BP04054 148 aaKnown RBP10.93□□□□□ -0.66
LMX1B-203ENST00000526117 NDUFA6P56556 154 aa10.93□□□□□ -0.66
LMX1B-203ENST00000526117 FAM19A2Q8N3H0 131 aa10.93□□□□□ -0.66
LMX1B-203ENST00000526117 IGKV2-24A0A0C4DH68 120 aa10.92□□□□□ -0.66
LMX1B-203ENST00000526117 HIST1H2BKO60814 126 aa10.92□□□□□ -0.66
LMX1B-203ENST00000526117 HIST1H2BJP06899 126 aa10.92□□□□□ -0.66
LMX1B-203ENST00000526117 ZNF22P17026 224 aaPredicted RBP10.92□□□□□ -0.66
LMX1B-203ENST00000526117 HIST1H2BOP23527 126 aa10.92□□□□□ -0.66
LMX1B-203ENST00000526117 HIST1H2BBP33778 126 aa10.92□□□□□ -0.66
LMX1B-203ENST00000526117 HIST1H2BDP58876 126 aa10.92□□□□□ -0.66
LMX1B-203ENST00000526117 HIST1H2BCP62807 126 aa10.92□□□□□ -0.66
LMX1B-203ENST00000526117 HIST2H2BEQ16778 126 aa10.92□□□□□ -0.66
LMX1B-203ENST00000526117 MAJINQ3KP22 176 aa10.92□□□□□ -0.66
LMX1B-203ENST00000526117 C6orf226Q5I0X4 101 aa10.92□□□□□ -0.66
LMX1B-203ENST00000526117 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.92□□□□□ -0.66
LMX1B-203ENST00000526117 HIST1H2BHQ93079 126 aa10.92□□□□□ -0.66
LMX1B-203ENST00000526117 HIST1H2BNQ99877 126 aa10.92□□□□□ -0.66
LMX1B-203ENST00000526117 HIST1H2BMQ99879 126 aa10.92□□□□□ -0.66
LMX1B-203ENST00000526117 IGLV5-39A0A0G2JS06 123 aa10.91□□□□□ -0.66
LMX1B-203ENST00000526117 CKS1BP61024 79 aa10.91□□□□□ -0.66
LMX1B-203ENST00000526117 F8VRH5 84 aa10.9□□□□□ -0.66
LMX1B-203ENST00000526117 LEPROTL1O95214 131 aa10.9□□□□□ -0.66
LMX1B-203ENST00000526117 C2orf82Q6UX34 121 aa10.9□□□□□ -0.66
LMX1B-203ENST00000526117 STPG4Q8N801 248 aa10.9□□□□□ -0.66
LMX1B-203ENST00000526117 DPH3Q96FX2 82 aa10.9□□□□□ -0.66
LMX1B-203ENST00000526117 TOMM7Q9P0U1 55 aa10.9□□□□□ -0.66
LMX1B-203ENST00000526117 CHTOPQ9Y3Y2 248 aaKnown RBP10.9□□□□□ -0.66
LMX1B-203ENST00000526117 C11orf86A6NJI1 115 aa10.89□□□□□ -0.67
LMX1B-203ENST00000526117 NUPR1O60356 82 aa10.89□□□□□ -0.67
LMX1B-203ENST00000526117 ATP6V1G1O75348 118 aa10.89□□□□□ -0.67
LMX1B-203ENST00000526117 KRTAP10-4P60372 401 aaPredicted RBP10.89□□□□□ -0.67
LMX1B-203ENST00000526117 COX7B2Q8TF08 81 aa10.89□□□□□ -0.67
LMX1B-203ENST00000526117 HSPB8Q9UJY1 196 aa10.89□□□□□ -0.67
LMX1B-203ENST00000526117 NDUFC2-KCTD14E9PQ53 114 aa10.88□□□□□ -0.67
LMX1B-203ENST00000526117 SPINK8P0C7L1 97 aa10.88□□□□□ -0.67
LMX1B-203ENST00000526117 RPL18AQ02543 176 aaKnown RBP10.88□□□□□ -0.67
LMX1B-203ENST00000526117 GAGE2BQ13066 116 aa10.88□□□□□ -0.67
LMX1B-203ENST00000526117 COA6Q5JTJ3 125 aaKnown RBP10.87□□□□□ -0.67
LMX1B-203ENST00000526117 Q6ZRP5 223 aa10.87□□□□□ -0.67
LMX1B-203ENST00000526117 ODF1Q14990 250 aa10.86□□□□□ -0.67
LMX1B-203ENST00000526117 SFTA2Q6UW10 78 aa10.85□□□□□ -0.67
LMX1B-203ENST00000526117 RPL37AP61513 92 aaKnown RBP10.84□□□□□ -0.67
LMX1B-203ENST00000526117 TMEM170BQ5T4T1 132 aa10.84□□□□□ -0.67
LMX1B-203ENST00000526117 C7orf33Q8WU49 177 aa10.84□□□□□ -0.67
LMX1B-203ENST00000526117 C9orf116Q5BN46 136 aaPredicted RBP10.83□□□□□ -0.68
LMX1B-203ENST00000526117 A0A1W2PNN7 141 aa10.82□□□□□ -0.68
LMX1B-203ENST00000526117 TMEM223A0PJW6 202 aa10.82□□□□□ -0.68
LMX1B-203ENST00000526117 INAFM2P0DMQ5 153 aa10.82□□□□□ -0.68
LMX1B-203ENST00000526117 PLNP26678 52 aa10.82□□□□□ -0.68
LMX1B-203ENST00000526117 FABP4P15090 132 aa10.8□□□□□ -0.68
LMX1B-203ENST00000526117 MAP1LC3CQ9BXW4 147 aa10.8□□□□□ -0.68
LMX1B-203ENST00000526117 GAGE2EQ4V326 116 aa10.79□□□□□ -0.68
LMX1B-203ENST00000526117 GAGE2DQ9UEU5 116 aa10.79□□□□□ -0.68
LMX1B-203ENST00000526117 COX17Q14061 63 aa10.78□□□□□ -0.68
LMX1B-203ENST00000526117 C9orf129Q5T035 196 aaKnown RBP10.78□□□□□ -0.68
LMX1B-203ENST00000526117 ZNF625Q96I27 306 aaPredicted RBP10.78□□□□□ -0.68
LMX1B-203ENST00000526117 DPM2O94777 84 aa10.77□□□□□ -0.69
LMX1B-203ENST00000526117 H0Y8G0 127 aa10.76□□□□□ -0.69
LMX1B-203ENST00000526117 SYS1-DBNDD2H3BUS1 97 aa10.75□□□□□ -0.69
LMX1B-203ENST00000526117 KRTAP7-1Q8IUC3 87 aa10.75□□□□□ -0.69
LMX1B-203ENST00000526117 FAM168BA1KXE4 195 aa10.74□□□□□ -0.69
LMX1B-203ENST00000526117 IGKCP01834 107 aa10.74□□□□□ -0.69
LMX1B-203ENST00000526117 PRR3P79522 188 aaKnown RBP10.74□□□□□ -0.69
LMX1B-203ENST00000526117 PLA2G2DQ9UNK4 145 aa10.74□□□□□ -0.69
LMX1B-203ENST00000526117 ERG28Q9UKR5 140 aa10.73□□□□□ -0.69
LMX1B-203ENST00000526117 LINC01545Q5VT33 79 aa10.72□□□□□ -0.69
LMX1B-203ENST00000526117 PET117Q6UWS5 81 aa10.72□□□□□ -0.69
LMX1B-203ENST00000526117 TP73-AS1Q9UF72 201 aa10.72□□□□□ -0.69
LMX1B-203ENST00000526117 MYCBP2O75592 4640 aa10.71□□□□□ -0.69
LMX1B-203ENST00000526117 HERVK_113P61574 105 aa10.71□□□□□ -0.69
LMX1B-203ENST00000526117 HERV-K104P63124 156 aa10.71□□□□□ -0.69
LMX1B-203ENST00000526117 PHF5AQ7RTV0 110 aaKnown RBP10.71□□□□□ -0.69
LMX1B-203ENST00000526117 FAM19A5Q7Z5A7 132 aaPredicted RBP10.71□□□□□ -0.69
LMX1B-203ENST00000526117 XAGE1AQ9HD64 81 aa10.71□□□□□ -0.69
LMX1B-203ENST00000526117 M0QXV9 152 aa10.7□□□□□ -0.7
LMX1B-203ENST00000526117 LEPROTO15243 131 aa10.7□□□□□ -0.7
LMX1B-203ENST00000526117 PLEKHB2Q96CS7 222 aa10.7□□□□□ -0.7
LMX1B-203ENST00000526117 PKHD1L1Q86WI1 4243 aa10.7□□□□□ -0.7
LMX1B-203ENST00000526117 IGLV5-37A0A075B6J1 123 aa10.69□□□□□ -0.7
LMX1B-203ENST00000526117 HNRNPA3P51991 378 aaKnown RBP10.69□□□□□ -0.7
LMX1B-203ENST00000526117 LINC00587B1AMM8 73 aa10.68□□□□□ -0.7
LMX1B-203ENST00000526117 C3orf79P0CE67 100 aa10.68□□□□□ -0.7
LMX1B-203ENST00000526117 SERTAD4-AS1Q5TG53 156 aa10.68□□□□□ -0.7
LMX1B-203ENST00000526117 PMCHL2Q9BQD1 86 aa10.68□□□□□ -0.7
LMX1B-203ENST00000526117 NDUFA12Q9UI09 145 aa10.68□□□□□ -0.7
LMX1B-203ENST00000526117 MYMXA0A1B0GTQ4 84 aa10.67□□□□□ -0.7
LMX1B-203ENST00000526117 PFN2P35080 140 aa10.67□□□□□ -0.7
LMX1B-203ENST00000526117 NMUP48645 174 aa10.67□□□□□ -0.7
LMX1B-203ENST00000526117 PSORS1C2Q9UIG4 136 aa10.67□□□□□ -0.7
LMX1B-203ENST00000526117 KRTAP29-1A8MX34 341 aaPredicted RBP10.66□□□□□ -0.7
LMX1B-203ENST00000526117 J3QQQ9 107 aa10.66□□□□□ -0.7
LMX1B-203ENST00000526117 TSPEAR-AS2P59090 65 aa10.66□□□□□ -0.7
LMX1B-203ENST00000526117 LBHQ53QV2 105 aaPredicted RBP10.66□□□□□ -0.7
LMX1B-203ENST00000526117 SND1-IT1Q9HBX3 110 aa10.66□□□□□ -0.7
LMX1B-203ENST00000526117 C22orf24Q9Y442 160 aa10.66□□□□□ -0.7
LMX1B-203ENST00000526117 E9PLD3 99 aa10.65□□□□□ -0.7
LMX1B-203ENST00000526117 OXTP01178 125 aa10.65□□□□□ -0.7
LMX1B-203ENST00000526117 AKR1D1P51857 326 aa10.64□□□□□ -0.71
LMX1B-203ENST00000526117 SRSF9Q13242 221 aaKnown RBP eCLIP10.64□□□□□ -0.71
LMX1B-203ENST00000526117 MRPL55Q7Z7F7 128 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms