RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 TMEM170BQ5T4T1 132 aa7.91□□□□□ -1.14
CCS-202ENST00000525435 COX7B2Q8TF08 81 aa7.91□□□□□ -1.14
CCS-202ENST00000525435 TOMM7Q9P0U1 55 aa7.91□□□□□ -1.14
CCS-202ENST00000525435 PCLOQ9Y6V0 5065 aa7.9□□□□□ -1.14
CCS-202ENST00000525435 SPINK8P0C7L1 97 aa7.9□□□□□ -1.14
CCS-202ENST00000525435 PLNP26678 52 aa7.9□□□□□ -1.14
CCS-202ENST00000525435 C10orf25Q5T742 122 aa7.9□□□□□ -1.14
CCS-202ENST00000525435 SFTA2Q6UW10 78 aa7.9□□□□□ -1.14
CCS-202ENST00000525435 DPH3Q96FX2 82 aa7.9□□□□□ -1.14
CCS-202ENST00000525435 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.9□□□□□ -1.14
CCS-202ENST00000525435 PTTG1IPP53801 180 aa7.89□□□□□ -1.15
CCS-202ENST00000525435 C2orf82Q6UX34 121 aa7.89□□□□□ -1.15
CCS-202ENST00000525435 SCXQ7RTU7 201 aa7.89□□□□□ -1.15
CCS-202ENST00000525435 Q8N1X5 172 aa7.89□□□□□ -1.15
CCS-202ENST00000525435 CIRBP-AS1Q8TBR5 109 aa7.89□□□□□ -1.15
CCS-202ENST00000525435 SPACA4Q8TDM5 124 aa7.89□□□□□ -1.15
CCS-202ENST00000525435 C6orf48Q9UBA6 75 aa7.89□□□□□ -1.15
CCS-202ENST00000525435 TMEM223A0PJW6 202 aa7.88□□□□□ -1.15
CCS-202ENST00000525435 APOBP04114 4563 aaKnown RBP7.88□□□□□ -1.15
CCS-202ENST00000525435 DNAH8Q96JB1 4490 aa7.88□□□□□ -1.15
CCS-202ENST00000525435 HSPG2P98160 4391 aa7.87□□□□□ -1.15
CCS-202ENST00000525435 A0A096LNI7 61 aa7.87□□□□□ -1.15
CCS-202ENST00000525435 NDUFC2-KCTD14E9PQ53 114 aa7.87□□□□□ -1.15
CCS-202ENST00000525435 H0Y8G0 127 aa7.87□□□□□ -1.15
CCS-202ENST00000525435 SYS1-DBNDD2H3BUS1 97 aa7.87□□□□□ -1.15
CCS-202ENST00000525435 DPM2O94777 84 aa7.87□□□□□ -1.15
CCS-202ENST00000525435 PET117Q6UWS5 81 aa7.87□□□□□ -1.15
CCS-202ENST00000525435 PLAC8Q9NZF1 115 aa7.87□□□□□ -1.15
CCS-202ENST00000525435 A0A087WYN8 130 aa7.86□□□□□ -1.15
CCS-202ENST00000525435 IGKV2-24A0A0C4DH68 120 aa7.86□□□□□ -1.15
CCS-202ENST00000525435 EPM2AB3EWF7 344 aa7.86□□□□□ -1.15
CCS-202ENST00000525435 PANO1I0J062 215 aa7.86□□□□□ -1.15
CCS-202ENST00000525435 S100A6P06703 90 aa7.86□□□□□ -1.15
CCS-202ENST00000525435 CHTF8P0CG12 524 aa7.86□□□□□ -1.15
CCS-202ENST00000525435 GAGE2BQ13066 116 aa7.86□□□□□ -1.15
CCS-202ENST00000525435 MAJINQ3KP22 176 aa7.86□□□□□ -1.15
CCS-202ENST00000525435 IGKCP01834 107 aa7.85□□□□□ -1.15
CCS-202ENST00000525435 LINC01545Q5VT33 79 aa7.85□□□□□ -1.15
CCS-202ENST00000525435 FAM229AH3BQW9 127 aa7.84□□□□□ -1.15
CCS-202ENST00000525435 AKR1D1P51857 326 aa7.84□□□□□ -1.15
CCS-202ENST00000525435 RPL18AQ02543 176 aaKnown RBP7.84□□□□□ -1.15
CCS-202ENST00000525435 Q6ZRP5 223 aa7.84□□□□□ -1.15
CCS-202ENST00000525435 STPG4Q8N801 248 aa7.84□□□□□ -1.15
CCS-202ENST00000525435 RYR1P21817 5038 aa7.84□□□□□ -1.15
CCS-202ENST00000525435 SMR3BP02814 79 aaPredicted RBP7.83□□□□□ -1.16
CCS-202ENST00000525435 C3orf79P0CE67 100 aa7.83□□□□□ -1.16
CCS-202ENST00000525435 HERVK_113P61574 105 aa7.83□□□□□ -1.16
CCS-202ENST00000525435 HAMPP81172 84 aa7.83□□□□□ -1.16
CCS-202ENST00000525435 COX17Q14061 63 aa7.83□□□□□ -1.16
CCS-202ENST00000525435 C9orf116Q5BN46 136 aaPredicted RBP7.83□□□□□ -1.16
CCS-202ENST00000525435 S100A2P29034 98 aa7.82□□□□□ -1.16
CCS-202ENST00000525435 HIST3H2BBQ8N257 126 aa7.82□□□□□ -1.16
CCS-202ENST00000525435 PLEKHB2Q96CS7 222 aa7.82□□□□□ -1.16
CCS-202ENST00000525435 ZNF625Q96I27 306 aaPredicted RBP7.82□□□□□ -1.16
CCS-202ENST00000525435 C20orf202A1L168 122 aa7.81□□□□□ -1.16
CCS-202ENST00000525435 LINC00587B1AMM8 73 aa7.81□□□□□ -1.16
CCS-202ENST00000525435 LEPROTO15243 131 aa7.81□□□□□ -1.16
CCS-202ENST00000525435 PLA2G1BP04054 148 aaKnown RBP7.81□□□□□ -1.16
CCS-202ENST00000525435 KRTDAPP60985 99 aa7.81□□□□□ -1.16
CCS-202ENST00000525435 GAGE2EQ4V326 116 aa7.81□□□□□ -1.16
CCS-202ENST00000525435 LINC00528Q8N1L1 170 aa7.81□□□□□ -1.16
CCS-202ENST00000525435 PMCHL2Q9BQD1 86 aa7.81□□□□□ -1.16
CCS-202ENST00000525435 GAGE2DQ9UEU5 116 aa7.81□□□□□ -1.16
CCS-202ENST00000525435 HERV-K104P63124 156 aa7.8□□□□□ -1.16
CCS-202ENST00000525435 HIST1H2BLQ99880 126 aa7.8□□□□□ -1.16
CCS-202ENST00000525435 MYMXA0A1B0GTQ4 84 aa7.79□□□□□ -1.16
CCS-202ENST00000525435 NMUP48645 174 aa7.79□□□□□ -1.16
CCS-202ENST00000525435 Q5VSD8 79 aa7.79□□□□□ -1.16
CCS-202ENST00000525435 C7orf33Q8WU49 177 aa7.79□□□□□ -1.16
CCS-202ENST00000525435 A0A1W2PNN7 141 aa7.78□□□□□ -1.16
CCS-202ENST00000525435 C5orf52A6NGY3 159 aa7.78□□□□□ -1.16
CCS-202ENST00000525435 E9PLD3 99 aa7.78□□□□□ -1.16
CCS-202ENST00000525435 SNRPEP62304 92 aaKnown RBP7.78□□□□□ -1.16
CCS-202ENST00000525435 NDUFA12Q9UI09 145 aa7.78□□□□□ -1.16
CCS-202ENST00000525435 ERG28Q9UKR5 140 aa7.78□□□□□ -1.16
CCS-202ENST00000525435 J3QQQ9 107 aa7.77□□□□□ -1.17
CCS-202ENST00000525435 C9orf129Q5T035 196 aaKnown RBP7.77□□□□□ -1.17
CCS-202ENST00000525435 PFN2P35080 140 aa7.76□□□□□ -1.17
CCS-202ENST00000525435 KRTAP4-5Q9BYR2 181 aa7.76□□□□□ -1.17
CCS-202ENST00000525435 PLA2G2DQ9UNK4 145 aa7.76□□□□□ -1.17
CCS-202ENST00000525435 LGALS3P17931 250 aaKnown RBP7.75□□□□□ -1.17
CCS-202ENST00000525435 XAGE1AQ9HD64 81 aa7.75□□□□□ -1.17
CCS-202ENST00000525435 LINC00158P58513 81 aa7.74□□□□□ -1.17
CCS-202ENST00000525435 RPL37AP61513 92 aaKnown RBP7.74□□□□□ -1.17
CCS-202ENST00000525435 TP73-AS1Q9UF72 201 aa7.74□□□□□ -1.17
CCS-202ENST00000525435 FAT1Q14517 4588 aa7.74□□□□□ -1.17
CCS-202ENST00000525435 FAM168BA1KXE4 195 aa7.73□□□□□ -1.17
CCS-202ENST00000525435 TSPEAR-AS2P59090 65 aa7.73□□□□□ -1.17
CCS-202ENST00000525435 LBHQ53QV2 105 aaPredicted RBP7.73□□□□□ -1.17
CCS-202ENST00000525435 KRTAP7-1Q8IUC3 87 aa7.73□□□□□ -1.17
CCS-202ENST00000525435 SND1-IT1Q9HBX3 110 aa7.73□□□□□ -1.17
CCS-202ENST00000525435 KRTAP10-4P60372 401 aaPredicted RBP7.72□□□□□ -1.17
CCS-202ENST00000525435 MEIG1Q5JSS6 88 aa7.72□□□□□ -1.17
CCS-202ENST00000525435 FAM19A5Q7Z5A7 132 aaPredicted RBP7.72□□□□□ -1.17
CCS-202ENST00000525435 VPS13BQ7Z7G8 4022 aa7.72□□□□□ -1.17
CCS-202ENST00000525435 IGLV5-37A0A075B6J1 123 aa7.71□□□□□ -1.18
CCS-202ENST00000525435 M0QXV9 152 aa7.71□□□□□ -1.18
CCS-202ENST00000525435 SMIM13P0DJ93 91 aa7.71□□□□□ -1.18
CCS-202ENST00000525435 RPL24P83731 157 aaKnown RBP7.71□□□□□ -1.18
CCS-202ENST00000525435 C22orf24Q9Y442 160 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms