RNA–Protein interactions for RNA: ENST00000524852.1

CAVIN3-202, Transcript of caveolae associated protein 3, humanhuman

TSL 3

Gene CAVIN3, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-202ENST00000524852 FAT1Q14517 4588 aa10.23□□□□□ -0.77
CAVIN3-202ENST00000524852 IGLV5-45A0A087WSX0 123 aa10.23□□□□□ -0.77
CAVIN3-202ENST00000524852 PMCHL1Q16048 86 aa10.23□□□□□ -0.77
CAVIN3-202ENST00000524852 NDUFC2-KCTD14E9PQ53 114 aa10.22□□□□□ -0.77
CAVIN3-202ENST00000524852 HSBP1O75506 76 aa10.22□□□□□ -0.77
CAVIN3-202ENST00000524852 TRGC2P03986 189 aa10.22□□□□□ -0.77
CAVIN3-202ENST00000524852 A0A096LNJ9 63 aa10.21□□□□□ -0.77
CAVIN3-202ENST00000524852 F8VRH5 84 aa10.21□□□□□ -0.77
CAVIN3-202ENST00000524852 J3QL48 77 aa10.21□□□□□ -0.77
CAVIN3-202ENST00000524852 KRTAP10-4P60372 401 aaPredicted RBP10.21□□□□□ -0.77
CAVIN3-202ENST00000524852 GAGE2EQ4V326 116 aa10.21□□□□□ -0.77
CAVIN3-202ENST00000524852 C9orf116Q5BN46 136 aaPredicted RBP10.21□□□□□ -0.77
CAVIN3-202ENST00000524852 COX7B2Q8TF08 81 aa10.21□□□□□ -0.77
CAVIN3-202ENST00000524852 GAGE2DQ9UEU5 116 aa10.21□□□□□ -0.77
CAVIN3-202ENST00000524852 SMIM1B2RUZ4 78 aa10.2□□□□□ -0.78
CAVIN3-202ENST00000524852 IGLC3P0DOY3 106 aa10.2□□□□□ -0.78
CAVIN3-202ENST00000524852 Q6ZRP5 223 aa10.2□□□□□ -0.78
CAVIN3-202ENST00000524852 SPINK8P0C7L1 97 aa10.18□□□□□ -0.78
CAVIN3-202ENST00000524852 IFI27L1Q96BM0 104 aa10.18□□□□□ -0.78
CAVIN3-202ENST00000524852 VPS13BQ7Z7G8 4022 aa10.17□□□□□ -0.78
CAVIN3-202ENST00000524852 A0A1W2PNN7 141 aa10.17□□□□□ -0.78
CAVIN3-202ENST00000524852 COLCA2A8K830 154 aa10.17□□□□□ -0.78
CAVIN3-202ENST00000524852 OXTP01178 125 aa10.17□□□□□ -0.78
CAVIN3-202ENST00000524852 CHTOPQ9Y3Y2 248 aaKnown RBP10.17□□□□□ -0.78
CAVIN3-202ENST00000524852 KRTAP29-1A8MX34 341 aaPredicted RBP10.16□□□□□ -0.78
CAVIN3-202ENST00000524852 TMEM170BQ5T4T1 132 aa10.16□□□□□ -0.78
CAVIN3-202ENST00000524852 FLG2Q5D862 2391 aaPredicted RBP10.15□□□□□ -0.78
CAVIN3-202ENST00000524852 PRR3P79522 188 aaKnown RBP10.15□□□□□ -0.78
CAVIN3-202ENST00000524852 TRAV12-1A0A0B4J245 112 aa10.14□□□□□ -0.79
CAVIN3-202ENST00000524852 ZNF22P17026 224 aaPredicted RBP10.14□□□□□ -0.79
CAVIN3-202ENST00000524852 SFTA2Q6UW10 78 aa10.14□□□□□ -0.79
CAVIN3-202ENST00000524852 FAM19A5Q7Z5A7 132 aaPredicted RBP10.14□□□□□ -0.79
CAVIN3-202ENST00000524852 FAM19A2Q8N3H0 131 aa10.13□□□□□ -0.79
CAVIN3-202ENST00000524852 HSPB8Q9UJY1 196 aa10.13□□□□□ -0.79
CAVIN3-202ENST00000524852 SERF1AO75920 110 aa10.12□□□□□ -0.79
CAVIN3-202ENST00000524852 LEPROTL1O95214 131 aa10.12□□□□□ -0.79
CAVIN3-202ENST00000524852 IGLV5-39A0A0G2JS06 123 aa10.11□□□□□ -0.79
CAVIN3-202ENST00000524852 C11orf86A6NJI1 115 aa10.11□□□□□ -0.79
CAVIN3-202ENST00000524852 PHF5AQ7RTV0 110 aaKnown RBP10.11□□□□□ -0.79
CAVIN3-202ENST00000524852 FAM168BA1KXE4 195 aa10.1□□□□□ -0.79
CAVIN3-202ENST00000524852 M0QXV9 152 aa10.1□□□□□ -0.79
CAVIN3-202ENST00000524852 UBE2BP63146 152 aa10.1□□□□□ -0.79
CAVIN3-202ENST00000524852 SPINK6Q6UWN8 80 aa10.1□□□□□ -0.79
CAVIN3-202ENST00000524852 DMBT1Q9UGM3 2413 aaPredicted RBP10.09□□□□□ -0.79
CAVIN3-202ENST00000524852 HNRNPA3P51991 378 aaKnown RBP10.09□□□□□ -0.79
CAVIN3-202ENST00000524852 LBHQ53QV2 105 aaPredicted RBP10.09□□□□□ -0.79
CAVIN3-202ENST00000524852 C9orf129Q5T035 196 aaKnown RBP10.09□□□□□ -0.79
CAVIN3-202ENST00000524852 XAGE1AQ9HD64 81 aa10.09□□□□□ -0.79
CAVIN3-202ENST00000524852 H0Y8G0 127 aa10.08□□□□□ -0.8
CAVIN3-202ENST00000524852 PSORS1C2Q9UIG4 136 aa10.08□□□□□ -0.8
CAVIN3-202ENST00000524852 COX17Q14061 63 aa10.07□□□□□ -0.8
CAVIN3-202ENST00000524852 C1orf137Q5JT78 98 aa10.07□□□□□ -0.8
CAVIN3-202ENST00000524852 REG3GQ6UW15 175 aa10.07□□□□□ -0.8
CAVIN3-202ENST00000524852 SCO1O75880 301 aa10.06□□□□□ -0.8
CAVIN3-202ENST00000524852 FABP4P15090 132 aa10.06□□□□□ -0.8
CAVIN3-202ENST00000524852 PFN2P35080 140 aa10.06□□□□□ -0.8
CAVIN3-202ENST00000524852 ODF1Q14990 250 aa10.06□□□□□ -0.8
CAVIN3-202ENST00000524852 TMEM223A0PJW6 202 aa10.05□□□□□ -0.8
CAVIN3-202ENST00000524852 PLNP26678 52 aa10.05□□□□□ -0.8
CAVIN3-202ENST00000524852 MAP1LC3CQ9BXW4 147 aa10.04□□□□□ -0.8
CAVIN3-202ENST00000524852 TP73-AS1Q9UF72 201 aa10.04□□□□□ -0.8
CAVIN3-202ENST00000524852 ERG28Q9UKR5 140 aa10.04□□□□□ -0.8
CAVIN3-202ENST00000524852 C22orf24Q9Y442 160 aa10.04□□□□□ -0.8
CAVIN3-202ENST00000524852 LINC00587B1AMM8 73 aa10.02□□□□□ -0.81
CAVIN3-202ENST00000524852 ATP6V1G1O75348 118 aa10.02□□□□□ -0.81
CAVIN3-202ENST00000524852 LINC00310P59036 64 aa10.02□□□□□ -0.81
CAVIN3-202ENST00000524852 SRSF9Q13242 221 aaKnown RBP eCLIP10.02□□□□□ -0.81
CAVIN3-202ENST00000524852 NKAPP1Q8N9T2 125 aa10.02□□□□□ -0.81
CAVIN3-202ENST00000524852 PLA2G2DQ9UNK4 145 aa10.02□□□□□ -0.81
CAVIN3-202ENST00000524852 NUPR1O60356 82 aa10.01□□□□□ -0.81
CAVIN3-202ENST00000524852 HIST1H2BKO60814 126 aa10.01□□□□□ -0.81
CAVIN3-202ENST00000524852 DPM2O94777 84 aa10.01□□□□□ -0.81
CAVIN3-202ENST00000524852 HIST1H2BJP06899 126 aa10.01□□□□□ -0.81
CAVIN3-202ENST00000524852 HIST1H2BOP23527 126 aa10.01□□□□□ -0.81
CAVIN3-202ENST00000524852 HIST1H2BBP33778 126 aa10.01□□□□□ -0.81
CAVIN3-202ENST00000524852 HIST1H2BDP58876 126 aa10.01□□□□□ -0.81
CAVIN3-202ENST00000524852 HERVK_113P61574 105 aa10.01□□□□□ -0.81
CAVIN3-202ENST00000524852 HIST1H2BCP62807 126 aa10.01□□□□□ -0.81
CAVIN3-202ENST00000524852 HIST2H2BEQ16778 126 aa10.01□□□□□ -0.81
CAVIN3-202ENST00000524852 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.01□□□□□ -0.81
CAVIN3-202ENST00000524852 SERTAD4-AS1Q5TG53 156 aa10.01□□□□□ -0.81
CAVIN3-202ENST00000524852 MRPL55Q7Z7F7 128 aaKnown RBP10.01□□□□□ -0.81
CAVIN3-202ENST00000524852 KRTAP7-1Q8IUC3 87 aa10.01□□□□□ -0.81
CAVIN3-202ENST00000524852 HIST1H2BHQ93079 126 aa10.01□□□□□ -0.81
CAVIN3-202ENST00000524852 ZNF625Q96I27 306 aaPredicted RBP10.01□□□□□ -0.81
CAVIN3-202ENST00000524852 HIST1H2BNQ99877 126 aa10.01□□□□□ -0.81
CAVIN3-202ENST00000524852 HIST1H2BMQ99879 126 aa10.01□□□□□ -0.81
CAVIN3-202ENST00000524852 IGLV7-43P04211 117 aa10□□□□□ -0.81
CAVIN3-202ENST00000524852 LINC00158P58513 81 aa10□□□□□ -0.81
CAVIN3-202ENST00000524852 HERV-K104P63124 156 aa10□□□□□ -0.81
CAVIN3-202ENST00000524852 RPL24P83731 157 aaKnown RBP10□□□□□ -0.81
CAVIN3-202ENST00000524852 DIRC1Q969H9 104 aa10□□□□□ -0.81
CAVIN3-202ENST00000524852 MYCBP2O75592 4640 aa10□□□□□ -0.81
CAVIN3-202ENST00000524852 S100A1P23297 94 aa9.99□□□□□ -0.81
CAVIN3-202ENST00000524852 MYMXA0A1B0GTQ4 84 aa9.98□□□□□ -0.81
CAVIN3-202ENST00000524852 IGKCP01834 107 aa9.98□□□□□ -0.81
CAVIN3-202ENST00000524852 PLEKHB2Q96CS7 222 aa9.98□□□□□ -0.81
CAVIN3-202ENST00000524852 LINC01600Q96MT4 127 aa9.97□□□□□ -0.81
CAVIN3-202ENST00000524852 SND1-IT1Q9HBX3 110 aa9.97□□□□□ -0.81
CAVIN3-202ENST00000524852 IGLV5-37A0A075B6J1 123 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms