RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 C6orf48Q9UBA6 75 aa9.58□□□□□ -0.88
SF3B2-202ENST00000524475 IGKV2-24A0A0C4DH68 120 aa9.57□□□□□ -0.88
SF3B2-202ENST00000524475 HIST1H2BKO60814 126 aa9.57□□□□□ -0.88
SF3B2-202ENST00000524475 HIST1H2BJP06899 126 aa9.57□□□□□ -0.88
SF3B2-202ENST00000524475 HIST1H2BOP23527 126 aa9.57□□□□□ -0.88
SF3B2-202ENST00000524475 HIST1H2BBP33778 126 aa9.57□□□□□ -0.88
SF3B2-202ENST00000524475 NDUFA6P56556 154 aa9.57□□□□□ -0.88
SF3B2-202ENST00000524475 HIST1H2BDP58876 126 aa9.57□□□□□ -0.88
SF3B2-202ENST00000524475 HIST1H2BCP62807 126 aa9.57□□□□□ -0.88
SF3B2-202ENST00000524475 HIST2H2BEQ16778 126 aa9.57□□□□□ -0.88
SF3B2-202ENST00000524475 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.57□□□□□ -0.88
SF3B2-202ENST00000524475 FAM19A2Q8N3H0 131 aa9.57□□□□□ -0.88
SF3B2-202ENST00000524475 HIST1H2BHQ93079 126 aa9.57□□□□□ -0.88
SF3B2-202ENST00000524475 HIST1H2BNQ99877 126 aa9.57□□□□□ -0.88
SF3B2-202ENST00000524475 HIST1H2BMQ99879 126 aa9.57□□□□□ -0.88
SF3B2-202ENST00000524475 LEPROTL1O95214 131 aa9.56□□□□□ -0.88
SF3B2-202ENST00000524475 PLA2G1BP04054 148 aaKnown RBP9.56□□□□□ -0.88
SF3B2-202ENST00000524475 ZNF22P17026 224 aaPredicted RBP9.56□□□□□ -0.88
SF3B2-202ENST00000524475 MAJINQ3KP22 176 aa9.56□□□□□ -0.88
SF3B2-202ENST00000524475 C6orf226Q5I0X4 101 aa9.56□□□□□ -0.88
SF3B2-202ENST00000524475 IGLV5-39A0A0G2JS06 123 aa9.55□□□□□ -0.88
SF3B2-202ENST00000524475 CKS1BP61024 79 aa9.55□□□□□ -0.88
SF3B2-202ENST00000524475 C2orf82Q6UX34 121 aa9.55□□□□□ -0.88
SF3B2-202ENST00000524475 TOMM7Q9P0U1 55 aa9.55□□□□□ -0.88
SF3B2-202ENST00000524475 C11orf86A6NJI1 115 aa9.54□□□□□ -0.88
SF3B2-202ENST00000524475 F8VRH5 84 aa9.54□□□□□ -0.88
SF3B2-202ENST00000524475 ATP6V1G1O75348 118 aa9.54□□□□□ -0.88
SF3B2-202ENST00000524475 STPG4Q8N801 248 aa9.54□□□□□ -0.88
SF3B2-202ENST00000524475 COX7B2Q8TF08 81 aa9.54□□□□□ -0.88
SF3B2-202ENST00000524475 DPH3Q96FX2 82 aa9.54□□□□□ -0.88
SF3B2-202ENST00000524475 HSPB8Q9UJY1 196 aa9.54□□□□□ -0.88
SF3B2-202ENST00000524475 CHTOPQ9Y3Y2 248 aaKnown RBP9.54□□□□□ -0.88
SF3B2-202ENST00000524475 NUPR1O60356 82 aa9.53□□□□□ -0.88
SF3B2-202ENST00000524475 KRTAP10-4P60372 401 aaPredicted RBP9.53□□□□□ -0.88
SF3B2-202ENST00000524475 RPL18AQ02543 176 aaKnown RBP9.53□□□□□ -0.88
SF3B2-202ENST00000524475 GAGE2BQ13066 116 aa9.53□□□□□ -0.88
SF3B2-202ENST00000524475 PKHD1L1Q86WI1 4243 aa9.53□□□□□ -0.88
SF3B2-202ENST00000524475 NDUFC2-KCTD14E9PQ53 114 aa9.52□□□□□ -0.89
SF3B2-202ENST00000524475 SPINK8P0C7L1 97 aa9.52□□□□□ -0.89
SF3B2-202ENST00000524475 Q6ZRP5 223 aa9.52□□□□□ -0.89
SF3B2-202ENST00000524475 MYCBP2O75592 4640 aa9.51□□□□□ -0.89
SF3B2-202ENST00000524475 COA6Q5JTJ3 125 aaKnown RBP9.51□□□□□ -0.89
SF3B2-202ENST00000524475 ODF1Q14990 250 aa9.5□□□□□ -0.89
SF3B2-202ENST00000524475 TMEM170BQ5T4T1 132 aa9.5□□□□□ -0.89
SF3B2-202ENST00000524475 RPL37AP61513 92 aaKnown RBP9.49□□□□□ -0.89
SF3B2-202ENST00000524475 SFTA2Q6UW10 78 aa9.49□□□□□ -0.89
SF3B2-202ENST00000524475 C7orf33Q8WU49 177 aa9.49□□□□□ -0.89
SF3B2-202ENST00000524475 INAFM2P0DMQ5 153 aa9.48□□□□□ -0.89
SF3B2-202ENST00000524475 C9orf116Q5BN46 136 aaPredicted RBP9.48□□□□□ -0.89
SF3B2-202ENST00000524475 A0A1W2PNN7 141 aa9.47□□□□□ -0.89
SF3B2-202ENST00000524475 TMEM223A0PJW6 202 aa9.47□□□□□ -0.89
SF3B2-202ENST00000524475 FABP4P15090 132 aa9.46□□□□□ -0.9
SF3B2-202ENST00000524475 PLNP26678 52 aa9.46□□□□□ -0.9
SF3B2-202ENST00000524475 MAP1LC3CQ9BXW4 147 aa9.46□□□□□ -0.9
SF3B2-202ENST00000524475 GAGE2EQ4V326 116 aa9.45□□□□□ -0.9
SF3B2-202ENST00000524475 GAGE2DQ9UEU5 116 aa9.45□□□□□ -0.9
SF3B2-202ENST00000524475 FLG2Q5D862 2391 aaPredicted RBP9.44□□□□□ -0.9
SF3B2-202ENST00000524475 C9orf129Q5T035 196 aaKnown RBP9.44□□□□□ -0.9
SF3B2-202ENST00000524475 H0Y8G0 127 aa9.43□□□□□ -0.9
SF3B2-202ENST00000524475 ZNF625Q96I27 306 aaPredicted RBP9.43□□□□□ -0.9
SF3B2-202ENST00000524475 DPM2O94777 84 aa9.42□□□□□ -0.9
SF3B2-202ENST00000524475 COX17Q14061 63 aa9.42□□□□□ -0.9
SF3B2-202ENST00000524475 FAT3Q8TDW7 4589 aa9.42□□□□□ -0.9
SF3B2-202ENST00000524475 SYS1-DBNDD2H3BUS1 97 aa9.41□□□□□ -0.9
SF3B2-202ENST00000524475 FAM168BA1KXE4 195 aa9.4□□□□□ -0.9
SF3B2-202ENST00000524475 IGKCP01834 107 aa9.4□□□□□ -0.9
SF3B2-202ENST00000524475 PRR3P79522 188 aaKnown RBP9.4□□□□□ -0.9
SF3B2-202ENST00000524475 KRTAP7-1Q8IUC3 87 aa9.4□□□□□ -0.9
SF3B2-202ENST00000524475 ERG28Q9UKR5 140 aa9.4□□□□□ -0.9
SF3B2-202ENST00000524475 PET117Q6UWS5 81 aa9.39□□□□□ -0.91
SF3B2-202ENST00000524475 PLA2G2DQ9UNK4 145 aa9.39□□□□□ -0.91
SF3B2-202ENST00000524475 LRP1Q07954 4544 aaKnown RBP9.38□□□□□ -0.91
SF3B2-202ENST00000524475 HERVK_113P61574 105 aa9.38□□□□□ -0.91
SF3B2-202ENST00000524475 LINC01545Q5VT33 79 aa9.38□□□□□ -0.91
SF3B2-202ENST00000524475 PHF5AQ7RTV0 110 aaKnown RBP9.38□□□□□ -0.91
SF3B2-202ENST00000524475 FAM19A5Q7Z5A7 132 aaPredicted RBP9.38□□□□□ -0.91
SF3B2-202ENST00000524475 XAGE1AQ9HD64 81 aa9.38□□□□□ -0.91
SF3B2-202ENST00000524475 TP73-AS1Q9UF72 201 aa9.38□□□□□ -0.91
SF3B2-202ENST00000524475 M0QXV9 152 aa9.37□□□□□ -0.91
SF3B2-202ENST00000524475 LEPROTO15243 131 aa9.37□□□□□ -0.91
SF3B2-202ENST00000524475 HERV-K104P63124 156 aa9.37□□□□□ -0.91
SF3B2-202ENST00000524475 PLEKHB2Q96CS7 222 aa9.37□□□□□ -0.91
SF3B2-202ENST00000524475 HNRNPA3P51991 378 aaKnown RBP9.36□□□□□ -0.91
SF3B2-202ENST00000524475 SERTAD4-AS1Q5TG53 156 aa9.36□□□□□ -0.91
SF3B2-202ENST00000524475 PMCHL2Q9BQD1 86 aa9.36□□□□□ -0.91
SF3B2-202ENST00000524475 DMBT1Q9UGM3 2413 aaPredicted RBP9.36□□□□□ -0.91
SF3B2-202ENST00000524475 IGLV5-37A0A075B6J1 123 aa9.35□□□□□ -0.91
SF3B2-202ENST00000524475 LINC00587B1AMM8 73 aa9.35□□□□□ -0.91
SF3B2-202ENST00000524475 C3orf79P0CE67 100 aa9.35□□□□□ -0.91
SF3B2-202ENST00000524475 NDUFA12Q9UI09 145 aa9.35□□□□□ -0.91
SF3B2-202ENST00000524475 PSORS1C2Q9UIG4 136 aa9.35□□□□□ -0.91
SF3B2-202ENST00000524475 MYMXA0A1B0GTQ4 84 aa9.34□□□□□ -0.91
SF3B2-202ENST00000524475 PFN2P35080 140 aa9.34□□□□□ -0.91
SF3B2-202ENST00000524475 NMUP48645 174 aa9.34□□□□□ -0.91
SF3B2-202ENST00000524475 LBHQ53QV2 105 aaPredicted RBP9.34□□□□□ -0.91
SF3B2-202ENST00000524475 C22orf24Q9Y442 160 aa9.34□□□□□ -0.91
SF3B2-202ENST00000524475 J3QQQ9 107 aa9.33□□□□□ -0.92
SF3B2-202ENST00000524475 TSPEAR-AS2P59090 65 aa9.33□□□□□ -0.92
SF3B2-202ENST00000524475 SND1-IT1Q9HBX3 110 aa9.33□□□□□ -0.92
SF3B2-202ENST00000524475 KRTAP29-1A8MX34 341 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms