RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 PKD1P98161 4303 aa4.12□□□□□ -1.75
IGHV4-55-201ENST00000520889 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.11□□□□□ -1.75
IGHV4-55-201ENST00000520889 C16orf90A8MZG2 172 aa4.11□□□□□ -1.75
IGHV4-55-201ENST00000520889 LINC00587B1AMM8 73 aa4.11□□□□□ -1.75
IGHV4-55-201ENST00000520889 E9PLD3 99 aa4.11□□□□□ -1.75
IGHV4-55-201ENST00000520889 H0Y8G0 127 aa4.11□□□□□ -1.75
IGHV4-55-201ENST00000520889 LEPROTO15243 131 aa4.11□□□□□ -1.75
IGHV4-55-201ENST00000520889 SPINK8P0C7L1 97 aa4.11□□□□□ -1.75
IGHV4-55-201ENST00000520889 NMUP48645 174 aa4.11□□□□□ -1.75
IGHV4-55-201ENST00000520889 CIRBPQ14011 172 aaKnown RBP4.11□□□□□ -1.75
IGHV4-55-201ENST00000520889 COX17Q14061 63 aa4.11□□□□□ -1.75
IGHV4-55-201ENST00000520889 SDIM1Q6ZPB5 146 aa4.11□□□□□ -1.75
IGHV4-55-201ENST00000520889 Q6ZRU5 148 aa4.11□□□□□ -1.75
IGHV4-55-201ENST00000520889 Q6ZSA8 131 aa4.11□□□□□ -1.75
IGHV4-55-201ENST00000520889 LINC00474Q9P2X8 69 aa4.11□□□□□ -1.75
IGHV4-55-201ENST00000520889 LOC107984640A0A0U1RRK4 108 aa4.1□□□□□ -1.75
IGHV4-55-201ENST00000520889 HERV-K104P63124 156 aa4.1□□□□□ -1.75
IGHV4-55-201ENST00000520889 ZNF625Q96I27 306 aaPredicted RBP4.1□□□□□ -1.75
IGHV4-55-201ENST00000520889 TOMM7Q9P0U1 55 aa4.1□□□□□ -1.75
IGHV4-55-201ENST00000520889 C6orf48Q9UBA6 75 aa4.1□□□□□ -1.75
IGHV4-55-201ENST00000520889 DNAH11Q96DT5 4516 aa4.1□□□□□ -1.75
IGHV4-55-201ENST00000520889 MYMXA0A1B0GTQ4 84 aa4.09□□□□□ -1.75
IGHV4-55-201ENST00000520889 NDUFC2-KCTD14E9PQ53 114 aa4.09□□□□□ -1.75
IGHV4-55-201ENST00000520889 J3QQQ9 107 aa4.09□□□□□ -1.75
IGHV4-55-201ENST00000520889 CDK2AP2O75956 126 aa4.09□□□□□ -1.75
IGHV4-55-201ENST00000520889 UNQ6190/PRO20217Q6UXQ8 127 aa4.09□□□□□ -1.75
IGHV4-55-201ENST00000520889 LINC00526Q96FQ7 95 aa4.09□□□□□ -1.75
IGHV4-55-201ENST00000520889 PMCHL2Q9BQD1 86 aa4.09□□□□□ -1.75
IGHV4-55-201ENST00000520889 HSBP1L1C9JCN9 74 aa4.08□□□□□ -1.76
IGHV4-55-201ENST00000520889 LGALS3P17931 250 aaKnown RBP4.08□□□□□ -1.76
IGHV4-55-201ENST00000520889 KRTAP10-1P60331 282 aa4.08□□□□□ -1.76
IGHV4-55-201ENST00000520889 JOSD1Q15040 202 aaPredicted RBP4.08□□□□□ -1.76
IGHV4-55-201ENST00000520889 C10orf25Q5T742 122 aa4.08□□□□□ -1.76
IGHV4-55-201ENST00000520889 LCE2CQ5TA81 110 aa4.08□□□□□ -1.76
IGHV4-55-201ENST00000520889 C2orf82Q6UX34 121 aa4.08□□□□□ -1.76
IGHV4-55-201ENST00000520889 NDUFA12Q9UI09 145 aa4.08□□□□□ -1.76
IGHV4-55-201ENST00000520889 EPM2AB3EWF7 344 aa4.07□□□□□ -1.76
IGHV4-55-201ENST00000520889 SCGB1D1O95968 90 aa4.07□□□□□ -1.76
IGHV4-55-201ENST00000520889 PTTG1IPP53801 180 aa4.07□□□□□ -1.76
IGHV4-55-201ENST00000520889 SPACA4Q8TDM5 124 aa4.07□□□□□ -1.76
IGHV4-55-201ENST00000520889 TMA7Q9Y2S6 64 aaKnown RBP4.07□□□□□ -1.76
IGHV4-55-201ENST00000520889 EPPK1P58107 5090 aaKnown RBP4.07□□□□□ -1.76
IGHV4-55-201ENST00000520889 DYNC1H1Q14204 4646 aaKnown RBP4.07□□□□□ -1.76
IGHV4-55-201ENST00000520889 DNAH5Q8TE73 4624 aa4.07□□□□□ -1.76
IGHV4-55-201ENST00000520889 HECTD4Q9Y4D8 3996 aa4.06□□□□□ -1.76
IGHV4-55-201ENST00000520889 TIMM17BO60830 172 aa4.06□□□□□ -1.76
IGHV4-55-201ENST00000520889 Q6ZRP5 223 aa4.06□□□□□ -1.76
IGHV4-55-201ENST00000520889 STPG4Q8N801 248 aa4.06□□□□□ -1.76
IGHV4-55-201ENST00000520889 PPDPFQ9H3Y8 114 aa4.06□□□□□ -1.76
IGHV4-55-201ENST00000520889 PLAC8Q9NZF1 115 aa4.06□□□□□ -1.76
IGHV4-55-201ENST00000520889 ERG28Q9UKR5 140 aa4.06□□□□□ -1.76
IGHV4-55-201ENST00000520889 PLA2G2DQ9UNK4 145 aa4.06□□□□□ -1.76
IGHV4-55-201ENST00000520889 A0A096LNI7 61 aa4.05□□□□□ -1.76
IGHV4-55-201ENST00000520889 LOC107984156A0A0G2JMH3 177 aa4.05□□□□□ -1.76
IGHV4-55-201ENST00000520889 TSPEAR-AS2P59090 65 aa4.05□□□□□ -1.76
IGHV4-55-201ENST00000520889 ARL17AQ8IVW1 177 aa4.05□□□□□ -1.76
IGHV4-55-201ENST00000520889 IGKV2D-26A0A0A0MRZ7 120 aa4.04□□□□□ -1.76
IGHV4-55-201ENST00000520889 A0A0J9YXY3 114 aa4.04□□□□□ -1.76
IGHV4-55-201ENST00000520889 DLEU1O43261 78 aa4.04□□□□□ -1.76
IGHV4-55-201ENST00000520889 FUSP35637 526 aaKnown RBP eCLIP4.04□□□□□ -1.76
IGHV4-55-201ENST00000520889 SMCPP49901 116 aaPredicted RBP4.04□□□□□ -1.76
IGHV4-55-201ENST00000520889 XGP55808 180 aa4.04□□□□□ -1.76
IGHV4-55-201ENST00000520889 RPL18AQ02543 176 aaKnown RBP4.04□□□□□ -1.76
IGHV4-55-201ENST00000520889 GAGE2BQ13066 116 aa4.04□□□□□ -1.76
IGHV4-55-201ENST00000520889 LINC01620Q4KN68 170 aa4.04□□□□□ -1.76
IGHV4-55-201ENST00000520889 ANKRD39Q53RE8 183 aa4.04□□□□□ -1.76
IGHV4-55-201ENST00000520889 C9orf116Q5BN46 136 aaPredicted RBP4.04□□□□□ -1.76
IGHV4-55-201ENST00000520889 PYY3Q5JQD4 70 aa4.04□□□□□ -1.76
IGHV4-55-201ENST00000520889 MEIG1Q5JSS6 88 aa4.04□□□□□ -1.76
IGHV4-55-201ENST00000520889 Q6ZVH6 145 aa4.04□□□□□ -1.76
IGHV4-55-201ENST00000520889 FAM30AQ9NZY2 134 aa4.04□□□□□ -1.76
IGHV4-55-201ENST00000520889 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.04□□□□□ -1.76
IGHV4-55-201ENST00000520889 BIRC6Q9NR09 4857 aa4.04□□□□□ -1.76
IGHV4-55-201ENST00000520889 IGLV5-37A0A075B6J1 123 aa4.03□□□□□ -1.76
IGHV4-55-201ENST00000520889 A0A087WYN8 130 aa4.03□□□□□ -1.76
IGHV4-55-201ENST00000520889 IGKV2-24A0A0C4DH68 120 aa4.03□□□□□ -1.76
IGHV4-55-201ENST00000520889 ZNF815PA8K554 130 aa4.03□□□□□ -1.76
IGHV4-55-201ENST00000520889 MAJINQ3KP22 176 aa4.03□□□□□ -1.76
IGHV4-55-201ENST00000520889 C9orf129Q5T035 196 aaKnown RBP4.03□□□□□ -1.76
IGHV4-55-201ENST00000520889 ATOH7Q8N100 152 aa4.03□□□□□ -1.76
IGHV4-55-201ENST00000520889 CIRBP-AS1Q8TBR5 109 aa4.03□□□□□ -1.76
IGHV4-55-201ENST00000520889 COPS9Q8WXC6 57 aa4.03□□□□□ -1.76
IGHV4-55-201ENST00000520889 TP73-AS1Q9UF72 201 aa4.03□□□□□ -1.76
IGHV4-55-201ENST00000520889 LRP1BQ9NZR2 4599 aa4.03□□□□□ -1.76
IGHV4-55-201ENST00000520889 DNAH8Q96JB1 4490 aa4.03□□□□□ -1.76
IGHV4-55-201ENST00000520889 PKHD1P08F94 4074 aa4.02□□□□□ -1.77
IGHV4-55-201ENST00000520889 TMEM238C9JI98 176 aa4.02□□□□□ -1.77
IGHV4-55-201ENST00000520889 PANO1I0J062 215 aa4.02□□□□□ -1.77
IGHV4-55-201ENST00000520889 COX8AP10176 69 aa4.02□□□□□ -1.77
IGHV4-55-201ENST00000520889 PFN2P35080 140 aa4.02□□□□□ -1.77
IGHV4-55-201ENST00000520889 LINC00158P58513 81 aa4.02□□□□□ -1.77
IGHV4-55-201ENST00000520889 RPL24P83731 157 aaKnown RBP4.02□□□□□ -1.77
IGHV4-55-201ENST00000520889 GAGE2EQ4V326 116 aa4.02□□□□□ -1.77
IGHV4-55-201ENST00000520889 SCXQ7RTU7 201 aa4.02□□□□□ -1.77
IGHV4-55-201ENST00000520889 BOD1L2Q8IYS8 172 aa4.02□□□□□ -1.77
IGHV4-55-201ENST00000520889 DPH3Q96FX2 82 aa4.02□□□□□ -1.77
IGHV4-55-201ENST00000520889 VAMP8Q9BV40 100 aa4.02□□□□□ -1.77
IGHV4-55-201ENST00000520889 SND1-IT1Q9HBX3 110 aa4.02□□□□□ -1.77
IGHV4-55-201ENST00000520889 GAGE2DQ9UEU5 116 aa4.02□□□□□ -1.77
IGHV4-55-201ENST00000520889 NDUFC2O95298 119 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms