RNA–Protein interactions for RNA: ENST00000514773.1

PCDH1-207, Transcript of protocadherin 1, humanhuman

TSL 4

Gene PCDH1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-207ENST00000514773 HIST1H2BHQ93079 126 aa11.45□□□□□ -0.58
PCDH1-207ENST00000514773 HIST1H2BNQ99877 126 aa11.45□□□□□ -0.58
PCDH1-207ENST00000514773 HIST1H2BMQ99879 126 aa11.45□□□□□ -0.58
PCDH1-207ENST00000514773 CHTOPQ9Y3Y2 248 aaKnown RBP11.45□□□□□ -0.58
PCDH1-207ENST00000514773 A0A096LNI7 61 aa11.44□□□□□ -0.58
PCDH1-207ENST00000514773 SMIM1B2RUZ4 78 aa11.44□□□□□ -0.58
PCDH1-207ENST00000514773 CHTF8P0CG12 524 aa11.44□□□□□ -0.58
PCDH1-207ENST00000514773 Q5VSD8 79 aa11.44□□□□□ -0.58
PCDH1-207ENST00000514773 SRRM2Q9UQ35 2752 aaKnown RBP11.43□□□□□ -0.58
PCDH1-207ENST00000514773 PANO1I0J062 215 aa11.43□□□□□ -0.58
PCDH1-207ENST00000514773 PTTG1IPP53801 180 aa11.43□□□□□ -0.58
PCDH1-207ENST00000514773 LINC00310P59036 64 aa11.43□□□□□ -0.58
PCDH1-207ENST00000514773 GAGE2BQ13066 116 aa11.43□□□□□ -0.58
PCDH1-207ENST00000514773 A0A087WYN8 130 aa11.42□□□□□ -0.58
PCDH1-207ENST00000514773 PLA2G1BP04054 148 aaKnown RBP11.42□□□□□ -0.58
PCDH1-207ENST00000514773 SPINK8P0C7L1 97 aa11.42□□□□□ -0.58
PCDH1-207ENST00000514773 RPL18AQ02543 176 aaKnown RBP11.42□□□□□ -0.58
PCDH1-207ENST00000514773 C10orf25Q5T742 122 aa11.42□□□□□ -0.58
PCDH1-207ENST00000514773 C2orf82Q6UX34 121 aa11.42□□□□□ -0.58
PCDH1-207ENST00000514773 LINC00528Q8N1L1 170 aa11.42□□□□□ -0.58
PCDH1-207ENST00000514773 COX7B2Q8TF08 81 aa11.42□□□□□ -0.58
PCDH1-207ENST00000514773 C6orf48Q9UBA6 75 aa11.42□□□□□ -0.58
PCDH1-207ENST00000514773 F8VRH5 84 aa11.41□□□□□ -0.58
PCDH1-207ENST00000514773 TLX1NBP0CAT3 122 aa11.41□□□□□ -0.58
PCDH1-207ENST00000514773 ZNF22P17026 224 aaPredicted RBP11.41□□□□□ -0.58
PCDH1-207ENST00000514773 TMEM170BQ5T4T1 132 aa11.41□□□□□ -0.58
PCDH1-207ENST00000514773 STPG4Q8N801 248 aa11.41□□□□□ -0.58
PCDH1-207ENST00000514773 PLAC8Q9NZF1 115 aa11.41□□□□□ -0.58
PCDH1-207ENST00000514773 NUPR1O60356 82 aa11.4□□□□□ -0.58
PCDH1-207ENST00000514773 C11orf86A6NJI1 115 aa11.39□□□□□ -0.59
PCDH1-207ENST00000514773 FABP4P15090 132 aa11.39□□□□□ -0.59
PCDH1-207ENST00000514773 NDUFC2-KCTD14E9PQ53 114 aa11.38□□□□□ -0.59
PCDH1-207ENST00000514773 H0Y8G0 127 aa11.38□□□□□ -0.59
PCDH1-207ENST00000514773 IGLV5-39A0A0G2JS06 123 aa11.37□□□□□ -0.59
PCDH1-207ENST00000514773 C7orf33Q8WU49 177 aa11.37□□□□□ -0.59
PCDH1-207ENST00000514773 MAP1LC3CQ9BXW4 147 aa11.37□□□□□ -0.59
PCDH1-207ENST00000514773 KRTAP17-1Q9BYP8 105 aa11.37□□□□□ -0.59
PCDH1-207ENST00000514773 FAT1Q14517 4588 aa11.36□□□□□ -0.59
PCDH1-207ENST00000514773 PLNP26678 52 aa11.36□□□□□ -0.59
PCDH1-207ENST00000514773 SFTA2Q6UW10 78 aa11.36□□□□□ -0.59
PCDH1-207ENST00000514773 ODF1Q14990 250 aa11.35□□□□□ -0.59
PCDH1-207ENST00000514773 Q6ZRP5 223 aa11.35□□□□□ -0.59
PCDH1-207ENST00000514773 KRTAP4-5Q9BYR2 181 aa11.35□□□□□ -0.59
PCDH1-207ENST00000514773 PCLOQ9Y6V0 5065 aa11.34□□□□□ -0.59
PCDH1-207ENST00000514773 GAGE2EQ4V326 116 aa11.34□□□□□ -0.59
PCDH1-207ENST00000514773 COA6Q5JTJ3 125 aaKnown RBP11.34□□□□□ -0.59
PCDH1-207ENST00000514773 GAGE2DQ9UEU5 116 aa11.34□□□□□ -0.59
PCDH1-207ENST00000514773 C9orf116Q5BN46 136 aaPredicted RBP11.33□□□□□ -0.6
PCDH1-207ENST00000514773 ABCA13Q86UQ4 5058 aa11.33□□□□□ -0.6
PCDH1-207ENST00000514773 TMEM223A0PJW6 202 aa11.32□□□□□ -0.6
PCDH1-207ENST00000514773 RPL37AP61513 92 aaKnown RBP11.32□□□□□ -0.6
PCDH1-207ENST00000514773 DPM2O94777 84 aa11.31□□□□□ -0.6
PCDH1-207ENST00000514773 INAFM2P0DMQ5 153 aa11.3□□□□□ -0.6
PCDH1-207ENST00000514773 VPS13BQ7Z7G8 4022 aa11.29□□□□□ -0.6
PCDH1-207ENST00000514773 A0A1W2PNN7 141 aa11.28□□□□□ -0.6
PCDH1-207ENST00000514773 SYS1-DBNDD2H3BUS1 97 aa11.28□□□□□ -0.6
PCDH1-207ENST00000514773 IGKCP01834 107 aa11.28□□□□□ -0.6
PCDH1-207ENST00000514773 HERVK_113P61574 105 aa11.28□□□□□ -0.6
PCDH1-207ENST00000514773 COX17Q14061 63 aa11.27□□□□□ -0.61
PCDH1-207ENST00000514773 PET117Q6UWS5 81 aa11.26□□□□□ -0.61
PCDH1-207ENST00000514773 C9orf129Q5T035 196 aaKnown RBP11.24□□□□□ -0.61
PCDH1-207ENST00000514773 FAM19A5Q7Z5A7 132 aaPredicted RBP11.24□□□□□ -0.61
PCDH1-207ENST00000514773 PLEKHB2Q96CS7 222 aa11.24□□□□□ -0.61
PCDH1-207ENST00000514773 ZNF625Q96I27 306 aaPredicted RBP11.24□□□□□ -0.61
PCDH1-207ENST00000514773 PMCHL2Q9BQD1 86 aa11.24□□□□□ -0.61
PCDH1-207ENST00000514773 ERG28Q9UKR5 140 aa11.24□□□□□ -0.61
PCDH1-207ENST00000514773 S100A6P06703 90 aa11.23□□□□□ -0.61
PCDH1-207ENST00000514773 HERV-K104P63124 156 aa11.23□□□□□ -0.61
PCDH1-207ENST00000514773 XAGE1AQ9HD64 81 aa11.23□□□□□ -0.61
PCDH1-207ENST00000514773 FAM168BA1KXE4 195 aa11.22□□□□□ -0.61
PCDH1-207ENST00000514773 LINC00587B1AMM8 73 aa11.22□□□□□ -0.61
PCDH1-207ENST00000514773 PFN2P35080 140 aa11.22□□□□□ -0.61
PCDH1-207ENST00000514773 MYMXA0A1B0GTQ4 84 aa11.21□□□□□ -0.61
PCDH1-207ENST00000514773 LEPROTO15243 131 aa11.21□□□□□ -0.61
PCDH1-207ENST00000514773 KRTAP10-4P60372 401 aaPredicted RBP11.21□□□□□ -0.61
PCDH1-207ENST00000514773 LINC01545Q5VT33 79 aa11.21□□□□□ -0.61
PCDH1-207ENST00000514773 C20orf202A1L168 122 aa11.2□□□□□ -0.62
PCDH1-207ENST00000514773 M0QXV9 152 aa11.2□□□□□ -0.62
PCDH1-207ENST00000514773 C3orf79P0CE67 100 aa11.2□□□□□ -0.62
PCDH1-207ENST00000514773 S100A2P29034 98 aa11.2□□□□□ -0.62
PCDH1-207ENST00000514773 AKR1D1P51857 326 aa11.2□□□□□ -0.62
PCDH1-207ENST00000514773 KRTDAPP60985 99 aa11.2□□□□□ -0.62
PCDH1-207ENST00000514773 NDUFA12Q9UI09 145 aa11.2□□□□□ -0.62
PCDH1-207ENST00000514773 NMUP48645 174 aa11.19□□□□□ -0.62
PCDH1-207ENST00000514773 PRR3P79522 188 aaKnown RBP11.19□□□□□ -0.62
PCDH1-207ENST00000514773 LBHQ53QV2 105 aaPredicted RBP11.19□□□□□ -0.62
PCDH1-207ENST00000514773 PHF5AQ7RTV0 110 aaKnown RBP11.19□□□□□ -0.62
PCDH1-207ENST00000514773 J3QQQ9 107 aa11.18□□□□□ -0.62
PCDH1-207ENST00000514773 LGALS3P17931 250 aaKnown RBP11.18□□□□□ -0.62
PCDH1-207ENST00000514773 LINC00158P58513 81 aa11.18□□□□□ -0.62
PCDH1-207ENST00000514773 PLA2G2DQ9UNK4 145 aa11.18□□□□□ -0.62
PCDH1-207ENST00000514773 FLG2Q5D862 2391 aaPredicted RBP11.18□□□□□ -0.62
PCDH1-207ENST00000514773 UBE2BP63146 152 aa11.17□□□□□ -0.62
PCDH1-207ENST00000514773 MEIG1Q5JSS6 88 aa11.17□□□□□ -0.62
PCDH1-207ENST00000514773 TP73-AS1Q9UF72 201 aa11.17□□□□□ -0.62
PCDH1-207ENST00000514773 E9PLD3 99 aa11.15□□□□□ -0.62
PCDH1-207ENST00000514773 SERTAD4-AS1Q5TG53 156 aa11.15□□□□□ -0.62
PCDH1-207ENST00000514773 HIST3H2BBQ8N257 126 aa11.15□□□□□ -0.62
PCDH1-207ENST00000514773 SND1-IT1Q9HBX3 110 aa11.15□□□□□ -0.62
PCDH1-207ENST00000514773 C22orf24Q9Y442 160 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms