RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 CSDC2Q9Y534 153 aaKnown RBP5.53□□□□□ -1.52
NEDD9-213ENST00000512665 LINC00959A0A1B0GUT2 108 aa5.52□□□□□ -1.53
NEDD9-213ENST00000512665 M0QXV9 152 aa5.52□□□□□ -1.53
NEDD9-213ENST00000512665 M0R2T5 61 aa5.52□□□□□ -1.53
NEDD9-213ENST00000512665 NUPR1O60356 82 aa5.52□□□□□ -1.53
NEDD9-213ENST00000512665 ZNF25P17030 456 aaPredicted RBP5.52□□□□□ -1.53
NEDD9-213ENST00000512665 FABP9Q0Z7S8 132 aa5.52□□□□□ -1.53
NEDD9-213ENST00000512665 FAM19A5Q7Z5A7 132 aaPredicted RBP5.52□□□□□ -1.53
NEDD9-213ENST00000512665 KRTAP7-1Q8IUC3 87 aa5.52□□□□□ -1.53
NEDD9-213ENST00000512665 NXT2Q9NPJ8 142 aaKnown RBP5.52□□□□□ -1.53
NEDD9-213ENST00000512665 TLX1NBP0CAT3 122 aa5.51□□□□□ -1.53
NEDD9-213ENST00000512665 KIAA1644Q3SXP7 199 aa5.51□□□□□ -1.53
NEDD9-213ENST00000512665 AMMECR1LQ6DCA0 310 aa5.51□□□□□ -1.53
NEDD9-213ENST00000512665 TRAPPC1Q9Y5R8 145 aa5.51□□□□□ -1.53
NEDD9-213ENST00000512665 FCER1GP30273 86 aa5.5□□□□□ -1.53
NEDD9-213ENST00000512665 SMAGPQ0VAQ4 97 aa5.5□□□□□ -1.53
NEDD9-213ENST00000512665 XP32Q5T750 250 aa5.5□□□□□ -1.53
NEDD9-213ENST00000512665 MRPL35Q9NZE8 188 aaKnown RBP5.5□□□□□ -1.53
NEDD9-213ENST00000512665 PYGO1Q9Y3Y4 419 aa5.5□□□□□ -1.53
NEDD9-213ENST00000512665 FLGP20930 4061 aaPredicted RBP5.49□□□□□ -1.53
NEDD9-213ENST00000512665 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.49□□□□□ -1.53
NEDD9-213ENST00000512665 IGKV2-29A2NJV5 120 aaPredicted RBP5.49□□□□□ -1.53
NEDD9-213ENST00000512665 LINC01549A6NIU2 74 aa5.49□□□□□ -1.53
NEDD9-213ENST00000512665 NPSP0C0P6 89 aa5.49□□□□□ -1.53
NEDD9-213ENST00000512665 RAB5AP20339 215 aa5.49□□□□□ -1.53
NEDD9-213ENST00000512665 G0S2P27469 103 aa5.49□□□□□ -1.53
NEDD9-213ENST00000512665 IFI27P40305 119 aaPredicted RBP5.49□□□□□ -1.53
NEDD9-213ENST00000512665 RPL28P46779 137 aaKnown RBP5.49□□□□□ -1.53
NEDD9-213ENST00000512665 MRPS36P82909 103 aaKnown RBP5.49□□□□□ -1.53
NEDD9-213ENST00000512665 ORMDL2Q53FV1 153 aa5.49□□□□□ -1.53
NEDD9-213ENST00000512665 C18orf32Q8TCD1 76 aa5.49□□□□□ -1.53
NEDD9-213ENST00000512665 FAM104AQ969W3 186 aa5.49□□□□□ -1.53
NEDD9-213ENST00000512665 TMEM18Q96B42 140 aa5.49□□□□□ -1.53
NEDD9-213ENST00000512665 OPRPNQ99935 248 aaPredicted RBP5.49□□□□□ -1.53
NEDD9-213ENST00000512665 CDC42SE2Q9NRR3 84 aa5.49□□□□□ -1.53
NEDD9-213ENST00000512665 UBE2D4Q9Y2X8 147 aa5.49□□□□□ -1.53
NEDD9-213ENST00000512665 LOC389332A0A1B0GUA5 103 aa5.48□□□□□ -1.53
NEDD9-213ENST00000512665 F8WDY8 70 aa5.48□□□□□ -1.53
NEDD9-213ENST00000512665 ATP6V1G1O75348 118 aa5.48□□□□□ -1.53
NEDD9-213ENST00000512665 SS18Q15532 418 aa5.48□□□□□ -1.53
NEDD9-213ENST00000512665 KRTAP19-1Q8IUB9 90 aa5.48□□□□□ -1.53
NEDD9-213ENST00000512665 SPANXA1Q9NS26 97 aa5.48□□□□□ -1.53
NEDD9-213ENST00000512665 NEBP20929 6669 aa5.47□□□□□ -1.53
NEDD9-213ENST00000512665 SCO1O75880 301 aa5.47□□□□□ -1.53
NEDD9-213ENST00000512665 MALP21145 153 aa5.47□□□□□ -1.53
NEDD9-213ENST00000512665 RPL39P62891 51 aaKnown RBP5.47□□□□□ -1.53
NEDD9-213ENST00000512665 RNASEKQ6P5S7 137 aaKnown RBP5.47□□□□□ -1.53
NEDD9-213ENST00000512665 SPAG11AQ6PDA7 123 aa5.47□□□□□ -1.53
NEDD9-213ENST00000512665 URB1-AS1Q96HZ7 61 aa5.47□□□□□ -1.53
NEDD9-213ENST00000512665 TMEM101Q96IK0 257 aa5.47□□□□□ -1.53
NEDD9-213ENST00000512665 IGIPA6NJ69 53 aa5.46□□□□□ -1.54
NEDD9-213ENST00000512665 COX7A2LO14548 114 aa5.46□□□□□ -1.54
NEDD9-213ENST00000512665 TRGC2P03986 189 aa5.46□□□□□ -1.54
NEDD9-213ENST00000512665 LINC00614P0C842 121 aa5.46□□□□□ -1.54
NEDD9-213ENST00000512665 CFC1P0CG37 223 aa5.46□□□□□ -1.54
NEDD9-213ENST00000512665 RAB5BP61020 215 aa5.46□□□□□ -1.54
NEDD9-213ENST00000512665 TOMM6Q96B49 74 aa5.46□□□□□ -1.54
NEDD9-213ENST00000512665 ANAPC11Q9NYG5 84 aa5.46□□□□□ -1.54
NEDD9-213ENST00000512665 CYSLTR1Q9Y271 337 aa5.46□□□□□ -1.54
NEDD9-213ENST00000512665 IGKV2D-26A0A0A0MRZ7 120 aa5.45□□□□□ -1.54
NEDD9-213ENST00000512665 KRTAP4-16G5E9R7 235 aaPredicted RBP5.45□□□□□ -1.54
NEDD9-213ENST00000512665 KRTAP6-3Q3LI67 103 aa5.45□□□□□ -1.54
NEDD9-213ENST00000512665 C2orf66Q6UXQ4 117 aa5.45□□□□□ -1.54
NEDD9-213ENST00000512665 TIMM17AQ99595 171 aa5.45□□□□□ -1.54
NEDD9-213ENST00000512665 IGLV4-3A0A075B6K6 122 aa5.44□□□□□ -1.54
NEDD9-213ENST00000512665 A0A096LNJ9 63 aa5.44□□□□□ -1.54
NEDD9-213ENST00000512665 LOC100996750A0A140TA64 210 aa5.44□□□□□ -1.54
NEDD9-213ENST00000512665 BCE1O60756 84 aa5.44□□□□□ -1.54
NEDD9-213ENST00000512665 SPAG11BQ08648 103 aa5.44□□□□□ -1.54
NEDD9-213ENST00000512665 FA2HQ7L5A8 372 aa5.44□□□□□ -1.54
NEDD9-213ENST00000512665 ERASQ7Z444 233 aa5.44□□□□□ -1.54
NEDD9-213ENST00000512665 OR10D4PQ8NGN7 298 aa5.44□□□□□ -1.54
NEDD9-213ENST00000512665 CHCHD1Q96BP2 118 aaKnown RBP5.44□□□□□ -1.54
NEDD9-213ENST00000512665 AMELXQ99217 191 aa5.44□□□□□ -1.54
NEDD9-213ENST00000512665 KRTAP4-6Q9BYQ5 205 aa5.44□□□□□ -1.54
NEDD9-213ENST00000512665 C1orf196B1AJZ1 125 aa5.43□□□□□ -1.54
NEDD9-213ENST00000512665 Q6ZUT4 128 aa5.43□□□□□ -1.54
NEDD9-213ENST00000512665 FAM19A3Q7Z5A8 133 aa5.43□□□□□ -1.54
NEDD9-213ENST00000512665 TMEM141Q96I45 108 aa5.43□□□□□ -1.54
NEDD9-213ENST00000512665 PDZD11Q5EBL8 140 aa5.42□□□□□ -1.54
NEDD9-213ENST00000512665 PAPPA-AS1Q5QFB9 102 aa5.42□□□□□ -1.54
NEDD9-213ENST00000512665 NDUFA1O15239 70 aa5.41□□□□□ -1.54
NEDD9-213ENST00000512665 HIST1H2BKO60814 126 aa5.41□□□□□ -1.54
NEDD9-213ENST00000512665 HBDP02042 147 aa5.41□□□□□ -1.54
NEDD9-213ENST00000512665 HIST1H2BJP06899 126 aa5.41□□□□□ -1.54
NEDD9-213ENST00000512665 HIST1H2BOP23527 126 aa5.41□□□□□ -1.54
NEDD9-213ENST00000512665 HIST1H2BBP33778 126 aa5.41□□□□□ -1.54
NEDD9-213ENST00000512665 HIST1H2BDP58876 126 aa5.41□□□□□ -1.54
NEDD9-213ENST00000512665 LINC00310P59036 64 aa5.41□□□□□ -1.54
NEDD9-213ENST00000512665 HIST1H2BCP62807 126 aa5.41□□□□□ -1.54
NEDD9-213ENST00000512665 HIST2H2BEQ16778 126 aa5.41□□□□□ -1.54
NEDD9-213ENST00000512665 GAGE2EQ4V326 116 aa5.41□□□□□ -1.54
NEDD9-213ENST00000512665 COA6Q5JTJ3 125 aaKnown RBP5.41□□□□□ -1.54
NEDD9-213ENST00000512665 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.41□□□□□ -1.54
NEDD9-213ENST00000512665 DAND5Q8N907 189 aa5.41□□□□□ -1.54
NEDD9-213ENST00000512665 HIST1H2BHQ93079 126 aa5.41□□□□□ -1.54
NEDD9-213ENST00000512665 HIST1H2BNQ99877 126 aa5.41□□□□□ -1.54
NEDD9-213ENST00000512665 HIST1H2BMQ99879 126 aa5.41□□□□□ -1.54
NEDD9-213ENST00000512665 GAGE2DQ9UEU5 116 aa5.41□□□□□ -1.54
NEDD9-213ENST00000512665 IGHV3OR16-9A0A0B4J2B5 98 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms