RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 STPG4Q8N801 248 aa5.4□□□□□ -1.54
PDPN-209ENST00000510906 PRELID3AQ96N28 172 aa5.4□□□□□ -1.54
PDPN-209ENST00000510906 YPEL4Q96NS1 127 aa5.4□□□□□ -1.54
PDPN-209ENST00000510906 S100A6P06703 90 aa5.39□□□□□ -1.55
PDPN-209ENST00000510906 Q6ZRU5 148 aa5.39□□□□□ -1.55
PDPN-209ENST00000510906 IMMP2LQ96T52 175 aa5.39□□□□□ -1.55
PDPN-209ENST00000510906 SPANXA1Q9NS26 97 aa5.39□□□□□ -1.55
PDPN-209ENST00000510906 Q8N9P0 234 aaPredicted RBP5.38□□□□□ -1.55
PDPN-209ENST00000510906 C7orf33Q8WU49 177 aa5.38□□□□□ -1.55
PDPN-209ENST00000510906 LOC389332A0A1B0GUA5 103 aa5.37□□□□□ -1.55
PDPN-209ENST00000510906 C5orf52A6NGY3 159 aa5.37□□□□□ -1.55
PDPN-209ENST00000510906 IFITM10A6NMD0 228 aa5.37□□□□□ -1.55
PDPN-209ENST00000510906 MRPS36P82909 103 aaKnown RBP5.37□□□□□ -1.55
PDPN-209ENST00000510906 SPAG11BQ08648 103 aa5.37□□□□□ -1.55
PDPN-209ENST00000510906 CAMK2N2Q96S95 79 aa5.37□□□□□ -1.55
PDPN-209ENST00000510906 LINC00474Q9P2X8 69 aa5.37□□□□□ -1.55
PDPN-209ENST00000510906 PKIGQ9Y2B9 76 aa5.37□□□□□ -1.55
PDPN-209ENST00000510906 TRAV9-1A0A075B6T8 112 aa5.36□□□□□ -1.55
PDPN-209ENST00000510906 IGHV3OR16-9A0A0B4J2B5 98 aa5.36□□□□□ -1.55
PDPN-209ENST00000510906 LOC107984640A0A0U1RRK4 108 aa5.36□□□□□ -1.55
PDPN-209ENST00000510906 APOMO95445 188 aa5.36□□□□□ -1.55
PDPN-209ENST00000510906 PRR3P79522 188 aaKnown RBP5.36□□□□□ -1.55
PDPN-209ENST00000510906 C2orf48Q96LS8 159 aa5.36□□□□□ -1.55
PDPN-209ENST00000510906 MAP1LC3AQ9H492 121 aa5.36□□□□□ -1.55
PDPN-209ENST00000510906 IGLV4-3A0A075B6K6 122 aa5.35□□□□□ -1.55
PDPN-209ENST00000510906 A0A0J9YXV3 536 aa5.35□□□□□ -1.55
PDPN-209ENST00000510906 A4D1N5 150 aa5.35□□□□□ -1.55
PDPN-209ENST00000510906 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.35□□□□□ -1.55
PDPN-209ENST00000510906 MT1HL1P0DM35 61 aa5.35□□□□□ -1.55
PDPN-209ENST00000510906 IFI27P40305 119 aaPredicted RBP5.35□□□□□ -1.55
PDPN-209ENST00000510906 ORAOV1Q8WV07 137 aa5.35□□□□□ -1.55
PDPN-209ENST00000510906 LAMTOR2Q9Y2Q5 125 aa5.35□□□□□ -1.55
PDPN-209ENST00000510906 PYGO1Q9Y3Y4 419 aa5.35□□□□□ -1.55
PDPN-209ENST00000510906 TGIF2-C20orf24A0A0A6YYL0 155 aa5.34□□□□□ -1.55
PDPN-209ENST00000510906 A0A1W2PNN7 141 aa5.34□□□□□ -1.55
PDPN-209ENST00000510906 ZC2HC1BQ5TFG8 222 aa5.34□□□□□ -1.55
PDPN-209ENST00000510906 Q8N8P6 123 aa5.34□□□□□ -1.55
PDPN-209ENST00000510906 OR10D4PQ8NGN7 298 aa5.34□□□□□ -1.55
PDPN-209ENST00000510906 IGLV5-45A0A087WSX0 123 aa5.33□□□□□ -1.56
PDPN-209ENST00000510906 SMIM6P0DI80 62 aa5.33□□□□□ -1.56
PDPN-209ENST00000510906 AKR1D1P51857 326 aa5.33□□□□□ -1.56
PDPN-209ENST00000510906 RPL18AQ02543 176 aaKnown RBP5.33□□□□□ -1.56
PDPN-209ENST00000510906 LBHQ53QV2 105 aaPredicted RBP5.33□□□□□ -1.56
PDPN-209ENST00000510906 C9orf116Q5BN46 136 aaPredicted RBP5.33□□□□□ -1.56
PDPN-209ENST00000510906 LINC00242Q5T6M2 205 aa5.33□□□□□ -1.56
PDPN-209ENST00000510906 C2orf66Q6UXQ4 117 aa5.33□□□□□ -1.56
PDPN-209ENST00000510906 LINC00518Q8N0U6 118 aa5.33□□□□□ -1.56
PDPN-209ENST00000510906 TMEM141Q96I45 108 aa5.33□□□□□ -1.56
PDPN-209ENST00000510906 MRPL35Q9NZE8 188 aaKnown RBP5.33□□□□□ -1.56
PDPN-209ENST00000510906 CYSLTR1Q9Y271 337 aa5.33□□□□□ -1.56
PDPN-209ENST00000510906 A0A087WZ39 114 aa5.32□□□□□ -1.56
PDPN-209ENST00000510906 NDUFA1O15239 70 aa5.32□□□□□ -1.56
PDPN-209ENST00000510906 UBE2D1P51668 147 aa5.32□□□□□ -1.56
PDPN-209ENST00000510906 FABP9Q0Z7S8 132 aa5.32□□□□□ -1.56
PDPN-209ENST00000510906 KIAA1644Q3SXP7 199 aa5.32□□□□□ -1.56
PDPN-209ENST00000510906 COX19Q49B96 90 aa5.32□□□□□ -1.56
PDPN-209ENST00000510906 UNQ6190/PRO20217Q6UXQ8 127 aa5.32□□□□□ -1.56
PDPN-209ENST00000510906 TEX43Q6ZNM6 134 aa5.32□□□□□ -1.56
PDPN-209ENST00000510906 LINC00173Q6ZV60 143 aa5.32□□□□□ -1.56
PDPN-209ENST00000510906 IGIPA6NJ69 53 aa5.31□□□□□ -1.56
PDPN-209ENST00000510906 HIST1H2BKO60814 126 aa5.31□□□□□ -1.56
PDPN-209ENST00000510906 TRGC2P03986 189 aa5.31□□□□□ -1.56
PDPN-209ENST00000510906 HIST1H2BJP06899 126 aa5.31□□□□□ -1.56
PDPN-209ENST00000510906 HIST1H2BOP23527 126 aa5.31□□□□□ -1.56
PDPN-209ENST00000510906 HIST1H2BBP33778 126 aa5.31□□□□□ -1.56
PDPN-209ENST00000510906 HIST1H2BDP58876 126 aa5.31□□□□□ -1.56
PDPN-209ENST00000510906 HIST1H2BCP62807 126 aa5.31□□□□□ -1.56
PDPN-209ENST00000510906 KIAA0087Q14695 138 aa5.31□□□□□ -1.56
PDPN-209ENST00000510906 HIST2H2BEQ16778 126 aa5.31□□□□□ -1.56
PDPN-209ENST00000510906 ORMDL2Q53FV1 153 aa5.31□□□□□ -1.56
PDPN-209ENST00000510906 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.31□□□□□ -1.56
PDPN-209ENST00000510906 Q6ZRP5 223 aa5.31□□□□□ -1.56
PDPN-209ENST00000510906 HIST1H2BHQ93079 126 aa5.31□□□□□ -1.56
PDPN-209ENST00000510906 HIST1H2BNQ99877 126 aa5.31□□□□□ -1.56
PDPN-209ENST00000510906 HIST1H2BMQ99879 126 aa5.31□□□□□ -1.56
PDPN-209ENST00000510906 KRTAP4-2Q9BYR5 136 aa5.31□□□□□ -1.56
PDPN-209ENST00000510906 C6orf48Q9UBA6 75 aa5.31□□□□□ -1.56
PDPN-209ENST00000510906 TNXBP22105 4242 aa5.31□□□□□ -1.56
PDPN-209ENST00000510906 F8WDY8 70 aa5.3□□□□□ -1.56
PDPN-209ENST00000510906 K7EMI3 77 aa5.3□□□□□ -1.56
PDPN-209ENST00000510906 S100A2P29034 98 aa5.3□□□□□ -1.56
PDPN-209ENST00000510906 SRSF9Q13242 221 aaKnown RBP eCLIP5.3□□□□□ -1.56
PDPN-209ENST00000510906 Q6ZN92 141 aa5.3□□□□□ -1.56
PDPN-209ENST00000510906 PHF5AQ7RTV0 110 aaKnown RBP5.3□□□□□ -1.56
PDPN-209ENST00000510906 AMELXQ99217 191 aa5.3□□□□□ -1.56
PDPN-209ENST00000510906 C2orf88Q9BSF0 95 aa5.3□□□□□ -1.56
PDPN-209ENST00000510906 VCX2Q9H322 139 aa5.3□□□□□ -1.56
PDPN-209ENST00000510906 NXT2Q9NPJ8 142 aaKnown RBP5.3□□□□□ -1.56
PDPN-209ENST00000510906 FAM168BA1KXE4 195 aa5.29□□□□□ -1.56
PDPN-209ENST00000510906 MT-ND6P03923 174 aa5.29□□□□□ -1.56
PDPN-209ENST00000510906 TLX1NBP0CAT3 122 aa5.29□□□□□ -1.56
PDPN-209ENST00000510906 NDUFA6P56556 154 aa5.29□□□□□ -1.56
PDPN-209ENST00000510906 S100A12P80511 92 aa5.29□□□□□ -1.56
PDPN-209ENST00000510906 COA6Q5JTJ3 125 aaKnown RBP5.29□□□□□ -1.56
PDPN-209ENST00000510906 SPINK6Q6UWN8 80 aa5.29□□□□□ -1.56
PDPN-209ENST00000510906 C2orf82Q6UX34 121 aa5.29□□□□□ -1.56
PDPN-209ENST00000510906 C12orf57Q99622 126 aa5.29□□□□□ -1.56
PDPN-209ENST00000510906 LINC01561Q8N1V8 128 aa5.28□□□□□ -1.56
PDPN-209ENST00000510906 TOMM6Q96B49 74 aa5.28□□□□□ -1.56
PDPN-209ENST00000510906 LINC01600Q96MT4 127 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms