RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 UNQ6190/PRO20217Q6UXQ8 127 aa12.62□□□□□ -0.39
SNX25-204ENST00000506896 FAM19A2Q8N3H0 131 aa12.62□□□□□ -0.39
SNX25-204ENST00000506896 TOMM7Q9P0U1 55 aa12.62□□□□□ -0.39
SNX25-204ENST00000506896 SMIM1B2RUZ4 78 aa12.61□□□□□ -0.39
SNX25-204ENST00000506896 PLA2G1BP04054 148 aaKnown RBP12.61□□□□□ -0.39
SNX25-204ENST00000506896 PTTG1IPP53801 180 aa12.61□□□□□ -0.39
SNX25-204ENST00000506896 LINC00310P59036 64 aa12.61□□□□□ -0.39
SNX25-204ENST00000506896 C10orf25Q5T742 122 aa12.61□□□□□ -0.39
SNX25-204ENST00000506896 PLAC8Q9NZF1 115 aa12.61□□□□□ -0.39
SNX25-204ENST00000506896 TRAV12-1A0A0B4J245 112 aa12.6□□□□□ -0.39
SNX25-204ENST00000506896 C6orf48Q9UBA6 75 aa12.6□□□□□ -0.39
SNX25-204ENST00000506896 LEPROTL1O95214 131 aa12.59□□□□□ -0.39
SNX25-204ENST00000506896 TLX1NBP0CAT3 122 aa12.59□□□□□ -0.39
SNX25-204ENST00000506896 CXCL5P42830 114 aa12.59□□□□□ -0.39
SNX25-204ENST00000506896 GAGE2BQ13066 116 aa12.59□□□□□ -0.39
SNX25-204ENST00000506896 C2orf82Q6UX34 121 aa12.59□□□□□ -0.39
SNX25-204ENST00000506896 CHTOPQ9Y3Y2 248 aaKnown RBP12.59□□□□□ -0.39
SNX25-204ENST00000506896 HIST1H2BKO60814 126 aa12.58□□□□□ -0.4
SNX25-204ENST00000506896 HIST1H2BJP06899 126 aa12.58□□□□□ -0.4
SNX25-204ENST00000506896 HIST1H2BOP23527 126 aa12.58□□□□□ -0.4
SNX25-204ENST00000506896 HIST1H2BBP33778 126 aa12.58□□□□□ -0.4
SNX25-204ENST00000506896 HIST1H2BDP58876 126 aa12.58□□□□□ -0.4
SNX25-204ENST00000506896 HIST1H2BCP62807 126 aa12.58□□□□□ -0.4
SNX25-204ENST00000506896 RPL18AQ02543 176 aaKnown RBP12.58□□□□□ -0.4
SNX25-204ENST00000506896 HIST2H2BEQ16778 126 aa12.58□□□□□ -0.4
SNX25-204ENST00000506896 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.58□□□□□ -0.4
SNX25-204ENST00000506896 STPG4Q8N801 248 aa12.58□□□□□ -0.4
SNX25-204ENST00000506896 HIST1H2BHQ93079 126 aa12.58□□□□□ -0.4
SNX25-204ENST00000506896 HIST1H2BNQ99877 126 aa12.58□□□□□ -0.4
SNX25-204ENST00000506896 HIST1H2BMQ99879 126 aa12.58□□□□□ -0.4
SNX25-204ENST00000506896 ATP6V1G1O75348 118 aa12.57□□□□□ -0.4
SNX25-204ENST00000506896 SPINK8P0C7L1 97 aa12.57□□□□□ -0.4
SNX25-204ENST00000506896 ZNF22P17026 224 aaPredicted RBP12.57□□□□□ -0.4
SNX25-204ENST00000506896 COX7B2Q8TF08 81 aa12.57□□□□□ -0.4
SNX25-204ENST00000506896 HSPB8Q9UJY1 196 aa12.57□□□□□ -0.4
SNX25-204ENST00000506896 F8VRH5 84 aa12.56□□□□□ -0.4
SNX25-204ENST00000506896 HERC1Q15751 4861 aa12.55□□□□□ -0.4
SNX25-204ENST00000506896 C11orf86A6NJI1 115 aa12.55□□□□□ -0.4
SNX25-204ENST00000506896 NUPR1O60356 82 aa12.55□□□□□ -0.4
SNX25-204ENST00000506896 NDUFC2-KCTD14E9PQ53 114 aa12.54□□□□□ -0.4
SNX25-204ENST00000506896 KRTAP10-4P60372 401 aaPredicted RBP12.54□□□□□ -0.4
SNX25-204ENST00000506896 IGLV5-39A0A0G2JS06 123 aa12.53□□□□□ -0.4
SNX25-204ENST00000506896 TMEM170BQ5T4T1 132 aa12.53□□□□□ -0.4
SNX25-204ENST00000506896 Q6ZRP5 223 aa12.53□□□□□ -0.4
SNX25-204ENST00000506896 C7orf33Q8WU49 177 aa12.52□□□□□ -0.41
SNX25-204ENST00000506896 DMBT1Q9UGM3 2413 aaPredicted RBP12.51□□□□□ -0.41
SNX25-204ENST00000506896 RPL37AP61513 92 aaKnown RBP12.51□□□□□ -0.41
SNX25-204ENST00000506896 FABP4P15090 132 aa12.5□□□□□ -0.41
SNX25-204ENST00000506896 C9orf116Q5BN46 136 aaPredicted RBP12.5□□□□□ -0.41
SNX25-204ENST00000506896 PKHD1L1Q86WI1 4243 aa12.49□□□□□ -0.41
SNX25-204ENST00000506896 ODF1Q14990 250 aa12.49□□□□□ -0.41
SNX25-204ENST00000506896 GAGE2EQ4V326 116 aa12.49□□□□□ -0.41
SNX25-204ENST00000506896 GAGE2DQ9UEU5 116 aa12.49□□□□□ -0.41
SNX25-204ENST00000506896 H0Y8G0 127 aa12.48□□□□□ -0.41
SNX25-204ENST00000506896 SFTA2Q6UW10 78 aa12.48□□□□□ -0.41
SNX25-204ENST00000506896 COA6Q5JTJ3 125 aaKnown RBP12.47□□□□□ -0.41
SNX25-204ENST00000506896 MAP1LC3CQ9BXW4 147 aa12.47□□□□□ -0.41
SNX25-204ENST00000506896 A0A1W2PNN7 141 aa12.46□□□□□ -0.41
SNX25-204ENST00000506896 TMEM223A0PJW6 202 aa12.46□□□□□ -0.41
SNX25-204ENST00000506896 PLNP26678 52 aa12.46□□□□□ -0.41
SNX25-204ENST00000506896 LRP1Q07954 4544 aaKnown RBP12.46□□□□□ -0.42
SNX25-204ENST00000506896 FAT3Q8TDW7 4589 aa12.44□□□□□ -0.42
SNX25-204ENST00000506896 DPM2O94777 84 aa12.42□□□□□ -0.42
SNX25-204ENST00000506896 C9orf129Q5T035 196 aaKnown RBP12.41□□□□□ -0.42
SNX25-204ENST00000506896 FAM168BA1KXE4 195 aa12.4□□□□□ -0.42
SNX25-204ENST00000506896 KRTAP29-1A8MX34 341 aaPredicted RBP12.39□□□□□ -0.43
SNX25-204ENST00000506896 IGKCP01834 107 aa12.39□□□□□ -0.43
SNX25-204ENST00000506896 COX17Q14061 63 aa12.39□□□□□ -0.43
SNX25-204ENST00000506896 FAM19A5Q7Z5A7 132 aaPredicted RBP12.39□□□□□ -0.43
SNX25-204ENST00000506896 SYS1-DBNDD2H3BUS1 97 aa12.38□□□□□ -0.43
SNX25-204ENST00000506896 ZNF625Q96I27 306 aaPredicted RBP12.38□□□□□ -0.43
SNX25-204ENST00000506896 XAGE1AQ9HD64 81 aa12.38□□□□□ -0.43
SNX25-204ENST00000506896 HERVK_113P61574 105 aa12.37□□□□□ -0.43
SNX25-204ENST00000506896 PRR3P79522 188 aaKnown RBP12.37□□□□□ -0.43
SNX25-204ENST00000506896 PMCHL2Q9BQD1 86 aa12.37□□□□□ -0.43
SNX25-204ENST00000506896 ERG28Q9UKR5 140 aa12.37□□□□□ -0.43
SNX25-204ENST00000506896 PET117Q6UWS5 81 aa12.36□□□□□ -0.43
SNX25-204ENST00000506896 PHF5AQ7RTV0 110 aaKnown RBP12.36□□□□□ -0.43
SNX25-204ENST00000506896 M0QXV9 152 aa12.35□□□□□ -0.43
SNX25-204ENST00000506896 PFN2P35080 140 aa12.35□□□□□ -0.43
SNX25-204ENST00000506896 HNRNPA3P51991 378 aaKnown RBP12.35□□□□□ -0.43
SNX25-204ENST00000506896 KRTAP7-1Q8IUC3 87 aa12.34□□□□□ -0.43
SNX25-204ENST00000506896 PLEKHB2Q96CS7 222 aa12.34□□□□□ -0.43
SNX25-204ENST00000506896 LEPROTO15243 131 aa12.33□□□□□ -0.44
SNX25-204ENST00000506896 HERV-K104P63124 156 aa12.33□□□□□ -0.44
SNX25-204ENST00000506896 LINC01545Q5VT33 79 aa12.33□□□□□ -0.44
SNX25-204ENST00000506896 PLA2G2DQ9UNK4 145 aa12.32□□□□□ -0.44
SNX25-204ENST00000506896 MYMXA0A1B0GTQ4 84 aa12.31□□□□□ -0.44
SNX25-204ENST00000506896 LINC00587B1AMM8 73 aa12.31□□□□□ -0.44
SNX25-204ENST00000506896 J3QL48 77 aa12.31□□□□□ -0.44
SNX25-204ENST00000506896 SERTAD4-AS1Q5TG53 156 aa12.31□□□□□ -0.44
SNX25-204ENST00000506896 NDUFA12Q9UI09 145 aa12.31□□□□□ -0.44
SNX25-204ENST00000506896 C3orf79P0CE67 100 aa12.3□□□□□ -0.44
SNX25-204ENST00000506896 LBHQ53QV2 105 aaPredicted RBP12.3□□□□□ -0.44
SNX25-204ENST00000506896 TP73-AS1Q9UF72 201 aa12.3□□□□□ -0.44
SNX25-204ENST00000506896 PSORS1C2Q9UIG4 136 aa12.3□□□□□ -0.44
SNX25-204ENST00000506896 C22orf24Q9Y442 160 aa12.3□□□□□ -0.44
SNX25-204ENST00000506896 J3QQQ9 107 aa12.29□□□□□ -0.44
SNX25-204ENST00000506896 OXTP01178 125 aa12.29□□□□□ -0.44
SNX25-204ENST00000506896 KRTDAPP60985 99 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms