RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 LINC00526Q96FQ7 95 aa7.99□□□□□ -1.13
SNCA-208ENST00000505199 IGKCP01834 107 aa7.98□□□□□ -1.13
SNCA-208ENST00000505199 SPINK8P0C7L1 97 aa7.98□□□□□ -1.13
SNCA-208ENST00000505199 XGP55808 180 aa7.98□□□□□ -1.13
SNCA-208ENST00000505199 LINC01545Q5VT33 79 aa7.98□□□□□ -1.13
SNCA-208ENST00000505199 SPACA4Q8TDM5 124 aa7.98□□□□□ -1.13
SNCA-208ENST00000505199 TOMM7Q9P0U1 55 aa7.98□□□□□ -1.13
SNCA-208ENST00000505199 NDUFC2-KCTD14E9PQ53 114 aa7.97□□□□□ -1.13
SNCA-208ENST00000505199 S100A2P29034 98 aa7.97□□□□□ -1.13
SNCA-208ENST00000505199 PTTG1IPP53801 180 aa7.97□□□□□ -1.13
SNCA-208ENST00000505199 COX17Q14061 63 aa7.97□□□□□ -1.13
SNCA-208ENST00000505199 LINC01620Q4KN68 170 aa7.97□□□□□ -1.13
SNCA-208ENST00000505199 UNQ6190/PRO20217Q6UXQ8 127 aa7.97□□□□□ -1.13
SNCA-208ENST00000505199 FAM30AQ9NZY2 134 aa7.97□□□□□ -1.13
SNCA-208ENST00000505199 C6orf48Q9UBA6 75 aa7.97□□□□□ -1.13
SNCA-208ENST00000505199 C20orf202A1L168 122 aa7.96□□□□□ -1.14
SNCA-208ENST00000505199 EPM2AB3EWF7 344 aa7.96□□□□□ -1.14
SNCA-208ENST00000505199 H0Y8G0 127 aa7.96□□□□□ -1.14
SNCA-208ENST00000505199 HERVK_113P61574 105 aa7.96□□□□□ -1.14
SNCA-208ENST00000505199 HIST3H2BBQ8N257 126 aa7.96□□□□□ -1.14
SNCA-208ENST00000505199 C5orf52A6NGY3 159 aa7.95□□□□□ -1.14
SNCA-208ENST00000505199 LINC00587B1AMM8 73 aa7.95□□□□□ -1.14
SNCA-208ENST00000505199 C3orf79P0CE67 100 aa7.95□□□□□ -1.14
SNCA-208ENST00000505199 C10orf25Q5T742 122 aa7.95□□□□□ -1.14
SNCA-208ENST00000505199 C2orf82Q6UX34 121 aa7.95□□□□□ -1.14
SNCA-208ENST00000505199 SCXQ7RTU7 201 aa7.95□□□□□ -1.14
SNCA-208ENST00000505199 PLAC8Q9NZF1 115 aa7.95□□□□□ -1.14
SNCA-208ENST00000505199 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.95□□□□□ -1.14
SNCA-208ENST00000505199 A0A096LNI7 61 aa7.94□□□□□ -1.14
SNCA-208ENST00000505199 NMUP48645 174 aa7.94□□□□□ -1.14
SNCA-208ENST00000505199 HERV-K104P63124 156 aa7.94□□□□□ -1.14
SNCA-208ENST00000505199 CIRBP-AS1Q8TBR5 109 aa7.94□□□□□ -1.14
SNCA-208ENST00000505199 PLEKHB2Q96CS7 222 aa7.94□□□□□ -1.14
SNCA-208ENST00000505199 HIST1H2BLQ99880 126 aa7.94□□□□□ -1.14
SNCA-208ENST00000505199 BIRC6Q9NR09 4857 aa7.94□□□□□ -1.14
SNCA-208ENST00000505199 SNRPEP62304 92 aaKnown RBP7.93□□□□□ -1.14
SNCA-208ENST00000505199 ZNF625Q96I27 306 aaPredicted RBP7.93□□□□□ -1.14
SNCA-208ENST00000505199 DNAH5Q8TE73 4624 aa7.93□□□□□ -1.14
SNCA-208ENST00000505199 LRP1BQ9NZR2 4599 aa7.92□□□□□ -1.14
SNCA-208ENST00000505199 KRTDAPP60985 99 aa7.92□□□□□ -1.14
SNCA-208ENST00000505199 RPL18AQ02543 176 aaKnown RBP7.92□□□□□ -1.14
SNCA-208ENST00000505199 Q6ZRP5 223 aa7.92□□□□□ -1.14
SNCA-208ENST00000505199 Q8N1X5 172 aa7.92□□□□□ -1.14
SNCA-208ENST00000505199 A0A087WYN8 130 aa7.91□□□□□ -1.14
SNCA-208ENST00000505199 E9PLD3 99 aa7.91□□□□□ -1.14
SNCA-208ENST00000505199 LEPROTO15243 131 aa7.91□□□□□ -1.14
SNCA-208ENST00000505199 MAJINQ3KP22 176 aa7.91□□□□□ -1.14
SNCA-208ENST00000505199 IGKV2-24A0A0C4DH68 120 aa7.9□□□□□ -1.14
SNCA-208ENST00000505199 MYMXA0A1B0GTQ4 84 aa7.9□□□□□ -1.14
SNCA-208ENST00000505199 PANO1I0J062 215 aa7.9□□□□□ -1.14
SNCA-208ENST00000505199 GAGE2BQ13066 116 aa7.9□□□□□ -1.14
SNCA-208ENST00000505199 DPH3Q96FX2 82 aa7.9□□□□□ -1.14
SNCA-208ENST00000505199 A6NJY4 79 aa7.89□□□□□ -1.15
SNCA-208ENST00000505199 J3QQQ9 107 aa7.89□□□□□ -1.15
SNCA-208ENST00000505199 CHTF8P0CG12 524 aa7.89□□□□□ -1.15
SNCA-208ENST00000505199 CTAG1AP78358 180 aa7.89□□□□□ -1.15
SNCA-208ENST00000505199 STPG4Q8N801 248 aa7.89□□□□□ -1.15
SNCA-208ENST00000505199 PMCHL2Q9BQD1 86 aa7.89□□□□□ -1.15
SNCA-208ENST00000505199 NDUFA12Q9UI09 145 aa7.89□□□□□ -1.15
SNCA-208ENST00000505199 ERG28Q9UKR5 140 aa7.89□□□□□ -1.15
SNCA-208ENST00000505199 DYNC1H1Q14204 4646 aaKnown RBP7.89□□□□□ -1.15
SNCA-208ENST00000505199 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
SNCA-208ENST00000505199 C9orf116Q5BN46 136 aaPredicted RBP7.88□□□□□ -1.15
SNCA-208ENST00000505199 PLA2G2DQ9UNK4 145 aa7.88□□□□□ -1.15
SNCA-208ENST00000505199 LGALS3P17931 250 aaKnown RBP7.87□□□□□ -1.15
SNCA-208ENST00000505199 KIAA1109Q2LD37 5005 aa7.87□□□□□ -1.15
SNCA-208ENST00000505199 PLA2G1BP04054 148 aaKnown RBP7.86□□□□□ -1.15
SNCA-208ENST00000505199 GAGE2EQ4V326 116 aa7.86□□□□□ -1.15
SNCA-208ENST00000505199 C7orf33Q8WU49 177 aa7.86□□□□□ -1.15
SNCA-208ENST00000505199 GAGE2DQ9UEU5 116 aa7.86□□□□□ -1.15
SNCA-208ENST00000505199 TP73-AS1Q9UF72 201 aa7.86□□□□□ -1.15
SNCA-208ENST00000505199 C9orf129Q5T035 196 aaKnown RBP7.85□□□□□ -1.15
SNCA-208ENST00000505199 LINC00528Q8N1L1 170 aa7.85□□□□□ -1.15
SNCA-208ENST00000505199 IGLV5-37A0A075B6J1 123 aa7.83□□□□□ -1.16
SNCA-208ENST00000505199 PFN2P35080 140 aa7.83□□□□□ -1.16
SNCA-208ENST00000505199 TSPEAR-AS2P59090 65 aa7.83□□□□□ -1.16
SNCA-208ENST00000505199 Q5VSD8 79 aa7.83□□□□□ -1.16
SNCA-208ENST00000505199 LOC107984156A0A0G2JMH3 177 aa7.82□□□□□ -1.16
SNCA-208ENST00000505199 A0A1W2PNN7 141 aa7.82□□□□□ -1.16
SNCA-208ENST00000505199 TIMM17BO60830 172 aa7.82□□□□□ -1.16
SNCA-208ENST00000505199 MEIG1Q5JSS6 88 aa7.82□□□□□ -1.16
SNCA-208ENST00000505199 ARL17AQ8IVW1 177 aa7.82□□□□□ -1.16
SNCA-208ENST00000505199 APOBP04114 4563 aaKnown RBP7.81□□□□□ -1.16
SNCA-208ENST00000505199 HSBP1L1C9JCN9 74 aa7.81□□□□□ -1.16
SNCA-208ENST00000505199 SMR3BP02814 79 aaPredicted RBP7.81□□□□□ -1.16
SNCA-208ENST00000505199 LINC00158P58513 81 aa7.81□□□□□ -1.16
SNCA-208ENST00000505199 RPL24P83731 157 aaKnown RBP7.81□□□□□ -1.16
SNCA-208ENST00000505199 LBHQ53QV2 105 aaPredicted RBP7.81□□□□□ -1.16
SNCA-208ENST00000505199 SND1-IT1Q9HBX3 110 aa7.81□□□□□ -1.16
SNCA-208ENST00000505199 XAGE1AQ9HD64 81 aa7.81□□□□□ -1.16
SNCA-208ENST00000505199 RYR1P21817 5038 aa7.8□□□□□ -1.16
SNCA-208ENST00000505199 HSPG2P98160 4391 aa7.8□□□□□ -1.16
SNCA-208ENST00000505199 HAMPP81172 84 aa7.8□□□□□ -1.16
SNCA-208ENST00000505199 A0A0J9YXY3 114 aa7.79□□□□□ -1.16
SNCA-208ENST00000505199 M0QXV9 152 aa7.79□□□□□ -1.16
SNCA-208ENST00000505199 PPDPFQ9H3Y8 114 aa7.79□□□□□ -1.16
SNCA-208ENST00000505199 DNAH8Q96JB1 4490 aa7.78□□□□□ -1.16
SNCA-208ENST00000505199 IGKV2D-26A0A0A0MRZ7 120 aa7.78□□□□□ -1.16
SNCA-208ENST00000505199 FAM168BA1KXE4 195 aa7.78□□□□□ -1.16
SNCA-208ENST00000505199 SCGB1D1O95968 90 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms