RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 TSPEAR-AS2P59090 65 aa5.27□□□□□ -1.57
CDC42SE2-208ENST00000505065 PLAC8Q9NZF1 115 aa5.27□□□□□ -1.57
CDC42SE2-208ENST00000505065 NDUFA1O15239 70 aa5.27□□□□□ -1.57
CDC42SE2-208ENST00000505065 Q6ZRU5 148 aa5.27□□□□□ -1.57
CDC42SE2-208ENST00000505065 IGKCP01834 107 aa5.27□□□□□ -1.57
CDC42SE2-208ENST00000505065 SNRPEP62304 92 aaKnown RBP5.27□□□□□ -1.57
CDC42SE2-208ENST00000505065 COX17Q14061 63 aa5.27□□□□□ -1.57
CDC42SE2-208ENST00000505065 C10orf25Q5T742 122 aa5.27□□□□□ -1.57
CDC42SE2-208ENST00000505065 GCSHP23434 173 aa5.26□□□□□ -1.57
CDC42SE2-208ENST00000505065 COX7B2Q8TF08 81 aa5.26□□□□□ -1.57
CDC42SE2-208ENST00000505065 PKIGQ9Y2B9 76 aa5.26□□□□□ -1.57
CDC42SE2-208ENST00000505065 C16orf90A8MZG2 172 aa5.26□□□□□ -1.57
CDC42SE2-208ENST00000505065 H3BRM9 83 aa5.26□□□□□ -1.57
CDC42SE2-208ENST00000505065 PANO1I0J062 215 aa5.26□□□□□ -1.57
CDC42SE2-208ENST00000505065 EREGO14944 169 aa5.26□□□□□ -1.57
CDC42SE2-208ENST00000505065 C5orf38Q86SI9 138 aa5.26□□□□□ -1.57
CDC42SE2-208ENST00000505065 ORAOV1Q8WV07 137 aa5.26□□□□□ -1.57
CDC42SE2-208ENST00000505065 LITAFQ99732 161 aa5.26□□□□□ -1.57
CDC42SE2-208ENST00000505065 NMUP48645 174 aa5.25□□□□□ -1.57
CDC42SE2-208ENST00000505065 SPAG11BQ08648 103 aa5.25□□□□□ -1.57
CDC42SE2-208ENST00000505065 KIAA1109Q2LD37 5005 aa5.25□□□□□ -1.57
CDC42SE2-208ENST00000505065 PSCAO43653 123 aa5.25□□□□□ -1.57
CDC42SE2-208ENST00000505065 PTTG1IPP53801 180 aa5.25□□□□□ -1.57
CDC42SE2-208ENST00000505065 IGLV5-52A0A0A0MRZ9 124 aa5.25□□□□□ -1.57
CDC42SE2-208ENST00000505065 SYCNQ0VAF6 134 aa5.25□□□□□ -1.57
CDC42SE2-208ENST00000505065 CARD19Q96LW7 228 aa5.25□□□□□ -1.57
CDC42SE2-208ENST00000505065 FAM30AQ9NZY2 134 aa5.25□□□□□ -1.57
CDC42SE2-208ENST00000505065 TIMM17BO60830 172 aa5.24□□□□□ -1.57
CDC42SE2-208ENST00000505065 SPINK8P0C7L1 97 aa5.24□□□□□ -1.57
CDC42SE2-208ENST00000505065 JOSD1Q15040 202 aaPredicted RBP5.24□□□□□ -1.57
CDC42SE2-208ENST00000505065 GEMIN7Q9H840 131 aaKnown RBP5.24□□□□□ -1.57
CDC42SE2-208ENST00000505065 TNXBP22105 4242 aa5.24□□□□□ -1.57
CDC42SE2-208ENST00000505065 hDV102S1A0JD36 115 aa5.23□□□□□ -1.57
CDC42SE2-208ENST00000505065 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.23□□□□□ -1.57
CDC42SE2-208ENST00000505065 LINC00587B1AMM8 73 aa5.23□□□□□ -1.57
CDC42SE2-208ENST00000505065 NDUFC2-KCTD14E9PQ53 114 aa5.23□□□□□ -1.57
CDC42SE2-208ENST00000505065 LECT2O14960 151 aa5.23□□□□□ -1.57
CDC42SE2-208ENST00000505065 PRSS2P07478 247 aa5.23□□□□□ -1.57
CDC42SE2-208ENST00000505065 UNQ6190/PRO20217Q6UXQ8 127 aa5.23□□□□□ -1.57
CDC42SE2-208ENST00000505065 Q6ZRP5 223 aa5.23□□□□□ -1.57
CDC42SE2-208ENST00000505065 LOC107984640A0A0U1RRK4 108 aa5.23□□□□□ -1.57
CDC42SE2-208ENST00000505065 HIGD2BQ4VC39 106 aa5.23□□□□□ -1.57
CDC42SE2-208ENST00000505065 C9orf129Q5T035 196 aaKnown RBP5.23□□□□□ -1.57
CDC42SE2-208ENST00000505065 DLEU1O43261 78 aa5.22□□□□□ -1.57
CDC42SE2-208ENST00000505065 HERV-K104P63124 156 aa5.22□□□□□ -1.57
CDC42SE2-208ENST00000505065 C12orf57Q99622 126 aa5.22□□□□□ -1.57
CDC42SE2-208ENST00000505065 IGKV2D-26A0A0A0MRZ7 120 aa5.22□□□□□ -1.57
CDC42SE2-208ENST00000505065 MALP21145 153 aa5.22□□□□□ -1.57
CDC42SE2-208ENST00000505065 PLEKHB2Q96CS7 222 aa5.22□□□□□ -1.57
CDC42SE2-208ENST00000505065 A0A096LNI7 61 aa5.22□□□□□ -1.57
CDC42SE2-208ENST00000505065 FABP4P15090 132 aa5.22□□□□□ -1.57
CDC42SE2-208ENST00000505065 IGKV3OR2-268A0A0C4DH90 116 aa5.21□□□□□ -1.57
CDC42SE2-208ENST00000505065 S100A6P06703 90 aa5.21□□□□□ -1.57
CDC42SE2-208ENST00000505065 FAT1Q14517 4588 aa5.21□□□□□ -1.57
CDC42SE2-208ENST00000505065 LINC00474Q9P2X8 69 aa5.21□□□□□ -1.58
CDC42SE2-208ENST00000505065 TP73-AS1Q9UF72 201 aa5.21□□□□□ -1.58
CDC42SE2-208ENST00000505065 ABCA13Q86UQ4 5058 aa5.21□□□□□ -1.58
CDC42SE2-208ENST00000505065 A0A0J9YXY3 114 aa5.2□□□□□ -1.58
CDC42SE2-208ENST00000505065 S100A12P80511 92 aa5.2□□□□□ -1.58
CDC42SE2-208ENST00000505065 C2orf82Q6UX34 121 aa5.2□□□□□ -1.58
CDC42SE2-208ENST00000505065 ZNF561-AS1K7EIQ3 104 aa5.2□□□□□ -1.58
CDC42SE2-208ENST00000505065 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.2□□□□□ -1.58
CDC42SE2-208ENST00000505065 ANKRD39Q53RE8 183 aa5.2□□□□□ -1.58
CDC42SE2-208ENST00000505065 J3QQQ9 107 aa5.2□□□□□ -1.58
CDC42SE2-208ENST00000505065 CAMK2N2Q96S95 79 aa5.2□□□□□ -1.58
CDC42SE2-208ENST00000505065 C20orf202A1L168 122 aa5.19□□□□□ -1.58
CDC42SE2-208ENST00000505065 FUSP35637 526 aaKnown RBP eCLIP5.19□□□□□ -1.58
CDC42SE2-208ENST00000505065 Q8NDZ9 215 aa5.19□□□□□ -1.58
CDC42SE2-208ENST00000505065 SPANXDQ9BXN6 97 aa5.19□□□□□ -1.58
CDC42SE2-208ENST00000505065 SPANXCQ9NY87 97 aa5.19□□□□□ -1.58
CDC42SE2-208ENST00000505065 LINC00526Q96FQ7 95 aa5.19□□□□□ -1.58
CDC42SE2-208ENST00000505065 PYY3Q5JQD4 70 aa5.18□□□□□ -1.58
CDC42SE2-208ENST00000505065 ERG28Q9UKR5 140 aa5.18□□□□□ -1.58
CDC42SE2-208ENST00000505065 TMEM170BQ5T4T1 132 aa5.18□□□□□ -1.58
CDC42SE2-208ENST00000505065 SCXQ7RTU7 201 aa5.18□□□□□ -1.58
CDC42SE2-208ENST00000505065 BOD1L2Q8IYS8 172 aa5.18□□□□□ -1.58
CDC42SE2-208ENST00000505065 CIRBP-AS1Q8TBR5 109 aa5.18□□□□□ -1.58
CDC42SE2-208ENST00000505065 SPANXB1Q9NS25 103 aaPredicted RBP5.18□□□□□ -1.58
CDC42SE2-208ENST00000505065 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.18□□□□□ -1.58
CDC42SE2-208ENST00000505065 KRTDAPP60985 99 aa5.18□□□□□ -1.58
CDC42SE2-208ENST00000505065 C21orf62-AS1Q17RA5 79 aa5.18□□□□□ -1.58
CDC42SE2-208ENST00000505065 A0A1W2PNN7 141 aa5.17□□□□□ -1.58
CDC42SE2-208ENST00000505065 PMCHL2Q9BQD1 86 aa5.17□□□□□ -1.58
CDC42SE2-208ENST00000505065 VPREB1P12018 145 aa5.17□□□□□ -1.58
CDC42SE2-208ENST00000505065 HERVK_113P61574 105 aa5.17□□□□□ -1.58
CDC42SE2-208ENST00000505065 C9orf116Q5BN46 136 aaPredicted RBP5.16□□□□□ -1.58
CDC42SE2-208ENST00000505065 STPG4Q8N801 248 aa5.16□□□□□ -1.58
CDC42SE2-208ENST00000505065 MYMXA0A1B0GTQ4 84 aa5.16□□□□□ -1.58
CDC42SE2-208ENST00000505065 NDUFC2O95298 119 aa5.16□□□□□ -1.58
CDC42SE2-208ENST00000505065 S100A2P29034 98 aa5.16□□□□□ -1.58
CDC42SE2-208ENST00000505065 MAJINQ3KP22 176 aa5.16□□□□□ -1.58
CDC42SE2-208ENST00000505065 NDUFA12Q9UI09 145 aa5.16□□□□□ -1.58
CDC42SE2-208ENST00000505065 C6orf226Q5I0X4 101 aa5.16□□□□□ -1.58
CDC42SE2-208ENST00000505065 KRTAP13-1Q8IUC0 172 aa5.16□□□□□ -1.58
CDC42SE2-208ENST00000505065 Q8N1X5 172 aa5.16□□□□□ -1.58
CDC42SE2-208ENST00000505065 SND1-IT1Q9HBX3 110 aa5.16□□□□□ -1.58
CDC42SE2-208ENST00000505065 COX8AP10176 69 aa5.15□□□□□ -1.58
CDC42SE2-208ENST00000505065 HIGD1BQ9P298 99 aa5.15□□□□□ -1.58
CDC42SE2-208ENST00000505065 ADAMTSL4-AS1Q5T5F5 129 aa5.15□□□□□ -1.59
CDC42SE2-208ENST00000505065 CKS1BP61024 79 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms