RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 GCSHP23434 173 aa9.72□□□□□ -0.85
ACTB-213ENST00000493945 Q6ZRU5 148 aa9.72□□□□□ -0.85
ACTB-213ENST00000493945 ATOH7Q8N100 152 aa9.72□□□□□ -0.85
ACTB-213ENST00000493945 C9orf163Q8N9P6 203 aa9.72□□□□□ -0.85
ACTB-213ENST00000493945 LINC00526Q96FQ7 95 aa9.72□□□□□ -0.85
ACTB-213ENST00000493945 NDUFA12Q9UI09 145 aa9.72□□□□□ -0.85
ACTB-213ENST00000493945 LOC107984640A0A0U1RRK4 108 aa9.71□□□□□ -0.86
ACTB-213ENST00000493945 C16orf90A8MZG2 172 aa9.71□□□□□ -0.86
ACTB-213ENST00000493945 VAMP8Q9BV40 100 aa9.71□□□□□ -0.86
ACTB-213ENST00000493945 LINC00474Q9P2X8 69 aa9.71□□□□□ -0.86
ACTB-213ENST00000493945 A0A1B0GVY2 172 aa9.7□□□□□ -0.86
ACTB-213ENST00000493945 C2orf82Q6UX34 121 aa9.7□□□□□ -0.86
ACTB-213ENST00000493945 STPG4Q8N801 248 aa9.7□□□□□ -0.86
ACTB-213ENST00000493945 DNAH2Q9P225 4427 aa9.7□□□□□ -0.86
ACTB-213ENST00000493945 S100A12P80511 92 aa9.69□□□□□ -0.86
ACTB-213ENST00000493945 CIRBPQ14011 172 aaKnown RBP9.69□□□□□ -0.86
ACTB-213ENST00000493945 COX17Q14061 63 aa9.69□□□□□ -0.86
ACTB-213ENST00000493945 MEIG1Q5JSS6 88 aa9.69□□□□□ -0.86
ACTB-213ENST00000493945 UNQ6190/PRO20217Q6UXQ8 127 aa9.69□□□□□ -0.86
ACTB-213ENST00000493945 DNAH10Q8IVF4 4471 aa9.69□□□□□ -0.86
ACTB-213ENST00000493945 DNAH17Q9UFH2 4485 aa9.68□□□□□ -0.86
ACTB-213ENST00000493945 KRTAP10-2P60368 255 aa9.68□□□□□ -0.86
ACTB-213ENST00000493945 RPL18AQ02543 176 aaKnown RBP9.68□□□□□ -0.86
ACTB-213ENST00000493945 ZNF815PA8K554 130 aa9.67□□□□□ -0.86
ACTB-213ENST00000493945 TLX1NBP0CAT3 122 aa9.67□□□□□ -0.86
ACTB-213ENST00000493945 ZNF625Q96I27 306 aaPredicted RBP9.67□□□□□ -0.86
ACTB-213ENST00000493945 C6orf48Q9UBA6 75 aa9.67□□□□□ -0.86
ACTB-213ENST00000493945 RYR3Q15413 4870 aa9.66□□□□□ -0.86
ACTB-213ENST00000493945 NDUFC2-KCTD14E9PQ53 114 aa9.66□□□□□ -0.86
ACTB-213ENST00000493945 ERG28Q9UKR5 140 aa9.66□□□□□ -0.86
ACTB-213ENST00000493945 SLPIP03973 132 aa9.65□□□□□ -0.86
ACTB-213ENST00000493945 SCGB1D4Q6XE38 83 aa9.65□□□□□ -0.86
ACTB-213ENST00000493945 SMIM6P0DI80 62 aa9.64□□□□□ -0.87
ACTB-213ENST00000493945 ANKRD39Q53RE8 183 aa9.64□□□□□ -0.87
ACTB-213ENST00000493945 PYY3Q5JQD4 70 aa9.64□□□□□ -0.87
ACTB-213ENST00000493945 C10orf25Q5T742 122 aa9.64□□□□□ -0.87
ACTB-213ENST00000493945 PFN2P35080 140 aa9.63□□□□□ -0.87
ACTB-213ENST00000493945 LINC00158P58513 81 aa9.63□□□□□ -0.87
ACTB-213ENST00000493945 TSPEAR-AS2P59090 65 aa9.63□□□□□ -0.87
ACTB-213ENST00000493945 SPATA45Q537H7 98 aa9.63□□□□□ -0.87
ACTB-213ENST00000493945 COPS9Q8WXC6 57 aa9.63□□□□□ -0.87
ACTB-213ENST00000493945 PAM16Q9Y3D7 125 aa9.63□□□□□ -0.87
ACTB-213ENST00000493945 TMEM238C9JI98 176 aa9.62□□□□□ -0.87
ACTB-213ENST00000493945 GAGE2BQ13066 116 aa9.62□□□□□ -0.87
ACTB-213ENST00000493945 DPH3Q96FX2 82 aa9.62□□□□□ -0.87
ACTB-213ENST00000493945 MIEN1Q9BRT3 115 aa9.62□□□□□ -0.87
ACTB-213ENST00000493945 IGKV2D-26A0A0A0MRZ7 120 aa9.61□□□□□ -0.87
ACTB-213ENST00000493945 PTTG1IPP53801 180 aa9.61□□□□□ -0.87
ACTB-213ENST00000493945 SDIM1Q6ZPB5 146 aa9.61□□□□□ -0.87
ACTB-213ENST00000493945 IGKV2-24A0A0C4DH68 120 aa9.6□□□□□ -0.87
ACTB-213ENST00000493945 TIMM17BO60830 172 aa9.6□□□□□ -0.87
ACTB-213ENST00000493945 MAJINQ3KP22 176 aa9.6□□□□□ -0.87
ACTB-213ENST00000493945 GAGE2EQ4V326 116 aa9.6□□□□□ -0.87
ACTB-213ENST00000493945 GAGE2DQ9UEU5 116 aa9.6□□□□□ -0.87
ACTB-213ENST00000493945 FAT2Q9NYQ8 4349 aa9.6□□□□□ -0.87
ACTB-213ENST00000493945 A0A0J9YXY3 114 aa9.59□□□□□ -0.87
ACTB-213ENST00000493945 FUSP35637 526 aaKnown RBP eCLIP9.59□□□□□ -0.871e-7■□□□□ 11.1
ACTB-213ENST00000493945 LINC01620Q4KN68 170 aa9.59□□□□□ -0.87
ACTB-213ENST00000493945 C9orf116Q5BN46 136 aaPredicted RBP9.59□□□□□ -0.87
ACTB-213ENST00000493945 A0A096LNI7 61 aa9.58□□□□□ -0.88
ACTB-213ENST00000493945 SMIM13P0DJ93 91 aa9.58□□□□□ -0.88
ACTB-213ENST00000493945 COX8AP10176 69 aa9.58□□□□□ -0.88
ACTB-213ENST00000493945 Q6ZRP5 223 aa9.58□□□□□ -0.88
ACTB-213ENST00000493945 DLEU1O43261 78 aa9.57□□□□□ -0.88
ACTB-213ENST00000493945 SLC25A34Q6PIV7 304 aa9.57□□□□□ -0.88
ACTB-213ENST00000493945 Q6ZVH6 145 aa9.57□□□□□ -0.88
ACTB-213ENST00000493945 PCP2Q8IVA1 136 aa9.57□□□□□ -0.88
ACTB-213ENST00000493945 LOC105371267A0A1B0GV96 52 aa9.56□□□□□ -0.88
ACTB-213ENST00000493945 KRTAP10-1P60331 282 aa9.56□□□□□ -0.88
ACTB-213ENST00000493945 SPACA4Q8TDM5 124 aa9.56□□□□□ -0.88
ACTB-213ENST00000493945 A0A0U1RRA0 63 aa9.55□□□□□ -0.88
ACTB-213ENST00000493945 RPL24P83731 157 aaKnown RBP9.55□□□□□ -0.88
ACTB-213ENST00000493945 BOD1L2Q8IYS8 172 aa9.55□□□□□ -0.88
ACTB-213ENST00000493945 MIR7-3HGQ8N6C7 128 aa9.55□□□□□ -0.88
ACTB-213ENST00000493945 Q6ZSA8 131 aa9.54□□□□□ -0.88
ACTB-213ENST00000493945 TTTY13Q9BZ97 58 aa9.54□□□□□ -0.88
ACTB-213ENST00000493945 HECTD4Q9Y4D8 3996 aa9.53□□□□□ -0.88
ACTB-213ENST00000493945 NKAPP1Q8N9T2 125 aa9.53□□□□□ -0.88
ACTB-213ENST00000493945 SND1-IT1Q9HBX3 110 aa9.53□□□□□ -0.88
ACTB-213ENST00000493945 XAGE1AQ9HD64 81 aa9.53□□□□□ -0.88
ACTB-213ENST00000493945 CHTF8P0CG12 524 aa9.52□□□□□ -0.89
ACTB-213ENST00000493945 IFITM1P13164 125 aa9.52□□□□□ -0.89
ACTB-213ENST00000493945 SRSF9Q13242 221 aaKnown RBP eCLIP9.52□□□□□ -0.89
ACTB-213ENST00000493945 C14orf144Q96I85 54 aa9.52□□□□□ -0.89
ACTB-213ENST00000493945 SPANXDQ9BXN6 97 aa9.52□□□□□ -0.89
ACTB-213ENST00000493945 SPANXCQ9NY87 97 aa9.52□□□□□ -0.89
ACTB-213ENST00000493945 PKD1P98161 4303 aa9.52□□□□□ -0.89
ACTB-213ENST00000493945 CDK2AP2O75956 126 aa9.51□□□□□ -0.89
ACTB-213ENST00000493945 SPANXB1Q9NS25 103 aaPredicted RBP9.51□□□□□ -0.89
ACTB-213ENST00000493945 UQCR10Q9UDW1 63 aa9.51□□□□□ -0.89
ACTB-213ENST00000493945 PLA2G2DQ9UNK4 145 aa9.51□□□□□ -0.89
ACTB-213ENST00000493945 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.51□□□□□ -0.89
ACTB-213ENST00000493945 A0A087WYN8 130 aa9.5□□□□□ -0.89
ACTB-213ENST00000493945 LBHQ53QV2 105 aaPredicted RBP9.5□□□□□ -0.89
ACTB-213ENST00000493945 C7orf33Q8WU49 177 aa9.5□□□□□ -0.89
ACTB-213ENST00000493945 PPDPFQ9H3Y8 114 aa9.5□□□□□ -0.89
ACTB-213ENST00000493945 DNAH11Q96DT5 4516 aa9.49□□□□□ -0.89
ACTB-213ENST00000493945 TSTD3H0UI37 97 aa9.49□□□□□ -0.89
ACTB-213ENST00000493945 C9orf129Q5T035 196 aaKnown RBP9.49□□□□□ -0.89
ACTB-213ENST00000493945 FAM19A5Q7Z5A7 132 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms