RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 CKS1BP61024 79 aa9.92□□□□□ -0.82
RPP40-206ENST00000483546 MAJINQ3KP22 176 aa9.92□□□□□ -0.82
RPP40-206ENST00000483546 TOMM7Q9P0U1 55 aa9.92□□□□□ -0.82
RPP40-206ENST00000483546 LINC00310P59036 64 aa9.91□□□□□ -0.82
RPP40-206ENST00000483546 UNQ6190/PRO20217Q6UXQ8 127 aa9.91□□□□□ -0.82
RPP40-206ENST00000483546 FAM19A2Q8N3H0 131 aa9.91□□□□□ -0.82
RPP40-206ENST00000483546 KRTAP4-5Q9BYR2 181 aa9.91□□□□□ -0.82
RPP40-206ENST00000483546 C6orf48Q9UBA6 75 aa9.91□□□□□ -0.82
RPP40-206ENST00000483546 LEPROTL1O95214 131 aa9.9□□□□□ -0.82
RPP40-206ENST00000483546 C10orf25Q5T742 122 aa9.9□□□□□ -0.82
RPP40-206ENST00000483546 CHTOPQ9Y3Y2 248 aaKnown RBP9.9□□□□□ -0.82
RPP40-206ENST00000483546 FAT1Q14517 4588 aa9.89□□□□□ -0.83
RPP40-206ENST00000483546 HIST1H2BKO60814 126 aa9.89□□□□□ -0.83
RPP40-206ENST00000483546 HIST1H2BJP06899 126 aa9.89□□□□□ -0.83
RPP40-206ENST00000483546 HIST1H2BOP23527 126 aa9.89□□□□□ -0.83
RPP40-206ENST00000483546 HIST1H2BBP33778 126 aa9.89□□□□□ -0.83
RPP40-206ENST00000483546 HIST1H2BDP58876 126 aa9.89□□□□□ -0.83
RPP40-206ENST00000483546 HIST1H2BCP62807 126 aa9.89□□□□□ -0.83
RPP40-206ENST00000483546 RPL18AQ02543 176 aaKnown RBP9.89□□□□□ -0.83
RPP40-206ENST00000483546 GAGE2BQ13066 116 aa9.89□□□□□ -0.83
RPP40-206ENST00000483546 HIST2H2BEQ16778 126 aa9.89□□□□□ -0.83
RPP40-206ENST00000483546 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.89□□□□□ -0.83
RPP40-206ENST00000483546 C2orf82Q6UX34 121 aa9.89□□□□□ -0.83
RPP40-206ENST00000483546 STPG4Q8N801 248 aa9.89□□□□□ -0.83
RPP40-206ENST00000483546 COX7B2Q8TF08 81 aa9.89□□□□□ -0.83
RPP40-206ENST00000483546 HIST1H2BHQ93079 126 aa9.89□□□□□ -0.83
RPP40-206ENST00000483546 HIST1H2BNQ99877 126 aa9.89□□□□□ -0.83
RPP40-206ENST00000483546 HIST1H2BMQ99879 126 aa9.89□□□□□ -0.83
RPP40-206ENST00000483546 HSPB8Q9UJY1 196 aa9.89□□□□□ -0.83
RPP40-206ENST00000483546 F8VRH5 84 aa9.88□□□□□ -0.83
RPP40-206ENST00000483546 ATP6V1G1O75348 118 aa9.88□□□□□ -0.83
RPP40-206ENST00000483546 ZNF22P17026 224 aaPredicted RBP9.88□□□□□ -0.83
RPP40-206ENST00000483546 IGLV5-39A0A0G2JS06 123 aa9.87□□□□□ -0.83
RPP40-206ENST00000483546 C11orf86A6NJI1 115 aa9.87□□□□□ -0.83
RPP40-206ENST00000483546 SPINK8P0C7L1 97 aa9.87□□□□□ -0.83
RPP40-206ENST00000483546 NDUFC2-KCTD14E9PQ53 114 aa9.86□□□□□ -0.83
RPP40-206ENST00000483546 NUPR1O60356 82 aa9.85□□□□□ -0.83
RPP40-206ENST00000483546 TMEM170BQ5T4T1 132 aa9.85□□□□□ -0.83
RPP40-206ENST00000483546 SFTA2Q6UW10 78 aa9.85□□□□□ -0.83
RPP40-206ENST00000483546 C7orf33Q8WU49 177 aa9.85□□□□□ -0.83
RPP40-206ENST00000483546 Q6ZRP5 223 aa9.84□□□□□ -0.83
RPP40-206ENST00000483546 RPL37AP61513 92 aaKnown RBP9.83□□□□□ -0.84
RPP40-206ENST00000483546 VPS13BQ7Z7G8 4022 aa9.83□□□□□ -0.84
RPP40-206ENST00000483546 INAFM2P0DMQ5 153 aa9.82□□□□□ -0.84
RPP40-206ENST00000483546 ODF1Q14990 250 aa9.82□□□□□ -0.84
RPP40-206ENST00000483546 COA6Q5JTJ3 125 aaKnown RBP9.82□□□□□ -0.84
RPP40-206ENST00000483546 MAP1LC3CQ9BXW4 147 aa9.82□□□□□ -0.84
RPP40-206ENST00000483546 FABP4P15090 132 aa9.81□□□□□ -0.84
RPP40-206ENST00000483546 PLNP26678 52 aa9.81□□□□□ -0.84
RPP40-206ENST00000483546 GAGE2EQ4V326 116 aa9.81□□□□□ -0.84
RPP40-206ENST00000483546 C9orf116Q5BN46 136 aaPredicted RBP9.81□□□□□ -0.84
RPP40-206ENST00000483546 GAGE2DQ9UEU5 116 aa9.81□□□□□ -0.84
RPP40-206ENST00000483546 ABCA13Q86UQ4 5058 aa9.8□□□□□ -0.84
RPP40-206ENST00000483546 TMEM223A0PJW6 202 aa9.8□□□□□ -0.84
RPP40-206ENST00000483546 KRTAP10-4P60372 401 aaPredicted RBP9.8□□□□□ -0.84
RPP40-206ENST00000483546 SRRM2Q9UQ35 2752 aaKnown RBP9.79□□□□□ -0.84
RPP40-206ENST00000483546 H0Y8G0 127 aa9.79□□□□□ -0.84
RPP40-206ENST00000483546 PCLOQ9Y6V0 5065 aa9.79□□□□□ -0.84
RPP40-206ENST00000483546 A0A1W2PNN7 141 aa9.78□□□□□ -0.84
RPP40-206ENST00000483546 DPM2O94777 84 aa9.77□□□□□ -0.85
RPP40-206ENST00000483546 COX17Q14061 63 aa9.77□□□□□ -0.85
RPP40-206ENST00000483546 C9orf129Q5T035 196 aaKnown RBP9.75□□□□□ -0.85
RPP40-206ENST00000483546 SYS1-DBNDD2H3BUS1 97 aa9.74□□□□□ -0.85
RPP40-206ENST00000483546 IGKCP01834 107 aa9.74□□□□□ -0.85
RPP40-206ENST00000483546 HERVK_113P61574 105 aa9.74□□□□□ -0.85
RPP40-206ENST00000483546 ZNF625Q96I27 306 aaPredicted RBP9.74□□□□□ -0.85
RPP40-206ENST00000483546 PRR3P79522 188 aaKnown RBP9.73□□□□□ -0.85
RPP40-206ENST00000483546 PET117Q6UWS5 81 aa9.73□□□□□ -0.85
RPP40-206ENST00000483546 FAM19A5Q7Z5A7 132 aaPredicted RBP9.73□□□□□ -0.85
RPP40-206ENST00000483546 ERG28Q9UKR5 140 aa9.73□□□□□ -0.85
RPP40-206ENST00000483546 FAM168BA1KXE4 195 aa9.72□□□□□ -0.85
RPP40-206ENST00000483546 HERV-K104P63124 156 aa9.72□□□□□ -0.85
RPP40-206ENST00000483546 PLEKHB2Q96CS7 222 aa9.72□□□□□ -0.85
RPP40-206ENST00000483546 XAGE1AQ9HD64 81 aa9.72□□□□□ -0.85
RPP40-206ENST00000483546 PLA2G2DQ9UNK4 145 aa9.72□□□□□ -0.85
RPP40-206ENST00000483546 LINC00587B1AMM8 73 aa9.71□□□□□ -0.86
RPP40-206ENST00000483546 M0QXV9 152 aa9.71□□□□□ -0.86
RPP40-206ENST00000483546 PHF5AQ7RTV0 110 aaKnown RBP9.71□□□□□ -0.86
RPP40-206ENST00000483546 TP73-AS1Q9UF72 201 aa9.71□□□□□ -0.86
RPP40-206ENST00000483546 FLG2Q5D862 2391 aaPredicted RBP9.7□□□□□ -0.86
RPP40-206ENST00000483546 LEPROTO15243 131 aa9.7□□□□□ -0.86
RPP40-206ENST00000483546 PFN2P35080 140 aa9.7□□□□□ -0.86
RPP40-206ENST00000483546 LINC01545Q5VT33 79 aa9.7□□□□□ -0.86
RPP40-206ENST00000483546 KRTAP7-1Q8IUC3 87 aa9.7□□□□□ -0.86
RPP40-206ENST00000483546 MYMXA0A1B0GTQ4 84 aa9.69□□□□□ -0.86
RPP40-206ENST00000483546 LBHQ53QV2 105 aaPredicted RBP9.69□□□□□ -0.86
RPP40-206ENST00000483546 PMCHL2Q9BQD1 86 aa9.69□□□□□ -0.86
RPP40-206ENST00000483546 NDUFA12Q9UI09 145 aa9.69□□□□□ -0.86
RPP40-206ENST00000483546 NMUP48645 174 aa9.68□□□□□ -0.86
RPP40-206ENST00000483546 AKR1D1P51857 326 aa9.68□□□□□ -0.86
RPP40-206ENST00000483546 C3orf79P0CE67 100 aa9.67□□□□□ -0.86
RPP40-206ENST00000483546 SERTAD4-AS1Q5TG53 156 aa9.67□□□□□ -0.86
RPP40-206ENST00000483546 IGLV5-37A0A075B6J1 123 aa9.66□□□□□ -0.86
RPP40-206ENST00000483546 C20orf202A1L168 122 aa9.66□□□□□ -0.86
RPP40-206ENST00000483546 J3QQQ9 107 aa9.66□□□□□ -0.86
RPP40-206ENST00000483546 UBE2BP63146 152 aa9.66□□□□□ -0.86
RPP40-206ENST00000483546 SND1-IT1Q9HBX3 110 aa9.66□□□□□ -0.86
RPP40-206ENST00000483546 PSORS1C2Q9UIG4 136 aa9.66□□□□□ -0.86
RPP40-206ENST00000483546 C22orf24Q9Y442 160 aa9.66□□□□□ -0.86
RPP40-206ENST00000483546 E9PLD3 99 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms