RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 Q6ZRU5 148 aa3.24□□□□□ -1.89
HDAC6-223ENST00000480525 SCXQ7RTU7 201 aa3.24□□□□□ -1.89
HDAC6-223ENST00000480525 MAP1LC3CQ9BXW4 147 aa3.24□□□□□ -1.89
HDAC6-223ENST00000480525 PPDPFQ9H3Y8 114 aa3.24□□□□□ -1.89
HDAC6-223ENST00000480525 TP73-AS1Q9UF72 201 aa3.24□□□□□ -1.89
HDAC6-223ENST00000480525 CHTOPQ9Y3Y2 248 aaKnown RBP3.24□□□□□ -1.89
HDAC6-223ENST00000480525 PCLOQ9Y6V0 5065 aa3.23□□□□□ -1.89
HDAC6-223ENST00000480525 LOC107984156A0A0G2JMH3 177 aa3.23□□□□□ -1.89
HDAC6-223ENST00000480525 TMEM223A0PJW6 202 aa3.23□□□□□ -1.89
HDAC6-223ENST00000480525 FAM229AH3BQW9 127 aa3.23□□□□□ -1.89
HDAC6-223ENST00000480525 PLA2G1BP04054 148 aaKnown RBP3.23□□□□□ -1.89
HDAC6-223ENST00000480525 NMUP48645 174 aa3.23□□□□□ -1.89
HDAC6-223ENST00000480525 SNRPEP62304 92 aaKnown RBP3.23□□□□□ -1.89
HDAC6-223ENST00000480525 HERV-K104P63124 156 aa3.23□□□□□ -1.89
HDAC6-223ENST00000480525 HIGD2BQ4VC39 106 aa3.23□□□□□ -1.89
HDAC6-223ENST00000480525 C6orf226Q5I0X4 101 aa3.23□□□□□ -1.89
HDAC6-223ENST00000480525 LINC01545Q5VT33 79 aa3.23□□□□□ -1.89
HDAC6-223ENST00000480525 ARL17AQ8IVW1 177 aa3.23□□□□□ -1.89
HDAC6-223ENST00000480525 CIRBP-AS1Q8TBR5 109 aa3.23□□□□□ -1.89
HDAC6-223ENST00000480525 COX7B2Q8TF08 81 aa3.23□□□□□ -1.89
HDAC6-223ENST00000480525 C6orf48Q9UBA6 75 aa3.23□□□□□ -1.89
HDAC6-223ENST00000480525 IGLV5-37A0A075B6J1 123 aa3.22□□□□□ -1.89
HDAC6-223ENST00000480525 A0A087WYN8 130 aa3.22□□□□□ -1.89
HDAC6-223ENST00000480525 A0A096LNI7 61 aa3.22□□□□□ -1.89
HDAC6-223ENST00000480525 SYS1-DBNDD2H3BUS1 97 aa3.22□□□□□ -1.89
HDAC6-223ENST00000480525 SCO1O75880 301 aa3.22□□□□□ -1.89
HDAC6-223ENST00000480525 DPM2O94777 84 aa3.22□□□□□ -1.89
HDAC6-223ENST00000480525 PMCHL1Q16048 86 aa3.22□□□□□ -1.89
HDAC6-223ENST00000480525 FAM19A2Q8N3H0 131 aa3.22□□□□□ -1.89
HDAC6-223ENST00000480525 PLEKHB2Q96CS7 222 aa3.22□□□□□ -1.89
HDAC6-223ENST00000480525 ZNF625Q96I27 306 aaPredicted RBP3.22□□□□□ -1.89
HDAC6-223ENST00000480525 FAM30AQ9NZY2 134 aa3.22□□□□□ -1.89
HDAC6-223ENST00000480525 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.22□□□□□ -1.89
HDAC6-223ENST00000480525 SRRM2Q9UQ35 2752 aaKnown RBP3.22□□□□□ -1.89
HDAC6-223ENST00000480525 C20orf202A1L168 122 aa3.21□□□□□ -1.9
HDAC6-223ENST00000480525 NUPR1O60356 82 aa3.21□□□□□ -1.9
HDAC6-223ENST00000480525 IGKCP01834 107 aa3.21□□□□□ -1.9
HDAC6-223ENST00000480525 KRTAP10-4P60372 401 aaPredicted RBP3.21□□□□□ -1.9
HDAC6-223ENST00000480525 HERVK_113P61574 105 aa3.21□□□□□ -1.9
HDAC6-223ENST00000480525 TMEM170BQ5T4T1 132 aa3.21□□□□□ -1.9
HDAC6-223ENST00000480525 ZC2HC1BQ5TFG8 222 aa3.21□□□□□ -1.9
HDAC6-223ENST00000480525 UNQ6190/PRO20217Q6UXQ8 127 aa3.21□□□□□ -1.9
HDAC6-223ENST00000480525 Q6ZRP5 223 aa3.21□□□□□ -1.9
HDAC6-223ENST00000480525 MYMXA0A1B0GTQ4 84 aa3.2□□□□□ -1.9
HDAC6-223ENST00000480525 E9PLD3 99 aa3.2□□□□□ -1.9
HDAC6-223ENST00000480525 LEPROTO15243 131 aa3.2□□□□□ -1.9
HDAC6-223ENST00000480525 C10orf25Q5T742 122 aa3.2□□□□□ -1.9
HDAC6-223ENST00000480525 LINC00528Q8N1L1 170 aa3.2□□□□□ -1.9
HDAC6-223ENST00000480525 C7orf33Q8WU49 177 aa3.2□□□□□ -1.9
HDAC6-223ENST00000480525 LINC00526Q96FQ7 95 aa3.2□□□□□ -1.9
HDAC6-223ENST00000480525 FAT1Q14517 4588 aa3.2□□□□□ -1.9
HDAC6-223ENST00000480525 IGKV2D-26A0A0A0MRZ7 120 aa3.19□□□□□ -1.9
HDAC6-223ENST00000480525 A0A0J9YXY3 114 aa3.19□□□□□ -1.9
HDAC6-223ENST00000480525 C5orf52A6NGY3 159 aa3.19□□□□□ -1.9
HDAC6-223ENST00000480525 PANO1I0J062 215 aa3.19□□□□□ -1.9
HDAC6-223ENST00000480525 TIMM17BO60830 172 aa3.19□□□□□ -1.9
HDAC6-223ENST00000480525 S100A6P06703 90 aa3.19□□□□□ -1.9
HDAC6-223ENST00000480525 SPINK8P0C7L1 97 aa3.19□□□□□ -1.9
HDAC6-223ENST00000480525 NDUFA6P56556 154 aa3.19□□□□□ -1.9
HDAC6-223ENST00000480525 C9orf116Q5BN46 136 aaPredicted RBP3.19□□□□□ -1.9
HDAC6-223ENST00000480525 Q5VSD8 79 aa3.19□□□□□ -1.9
HDAC6-223ENST00000480525 C2orf82Q6UX34 121 aa3.19□□□□□ -1.9
HDAC6-223ENST00000480525 HIST3H2BBQ8N257 126 aa3.19□□□□□ -1.9
HDAC6-223ENST00000480525 STPG4Q8N801 248 aa3.19□□□□□ -1.9
HDAC6-223ENST00000480525 TOMM7Q9P0U1 55 aa3.19□□□□□ -1.9
HDAC6-223ENST00000480525 ERG28Q9UKR5 140 aa3.19□□□□□ -1.9
HDAC6-223ENST00000480525 DMBT1Q9UGM3 2413 aaPredicted RBP3.18□□□□□ -1.9
HDAC6-223ENST00000480525 ABCA13Q86UQ4 5058 aa3.18□□□□□ -1.9
HDAC6-223ENST00000480525 J3QQQ9 107 aa3.18□□□□□ -1.9
HDAC6-223ENST00000480525 NDUFC2O95298 119 aa3.18□□□□□ -1.9
HDAC6-223ENST00000480525 C3orf79P0CE67 100 aa3.18□□□□□ -1.9
HDAC6-223ENST00000480525 FABP4P15090 132 aa3.18□□□□□ -1.9
HDAC6-223ENST00000480525 CTAG1AP78358 180 aa3.18□□□□□ -1.9
HDAC6-223ENST00000480525 RPL24P83731 157 aaKnown RBP3.18□□□□□ -1.9
HDAC6-223ENST00000480525 RPL18AQ02543 176 aaKnown RBP3.18□□□□□ -1.9
HDAC6-223ENST00000480525 MAJINQ3KP22 176 aa3.18□□□□□ -1.9
HDAC6-223ENST00000480525 LINC01620Q4KN68 170 aa3.18□□□□□ -1.9
HDAC6-223ENST00000480525 LBHQ53QV2 105 aaPredicted RBP3.18□□□□□ -1.9
HDAC6-223ENST00000480525 C9orf129Q5T035 196 aaKnown RBP3.18□□□□□ -1.9
HDAC6-223ENST00000480525 Q6ZVH6 145 aa3.18□□□□□ -1.9
HDAC6-223ENST00000480525 HIST1H2BLQ99880 126 aa3.18□□□□□ -1.9
HDAC6-223ENST00000480525 NDUFA12Q9UI09 145 aa3.18□□□□□ -1.9
HDAC6-223ENST00000480525 FLG2Q5D862 2391 aaPredicted RBP3.18□□□□□ -1.9
HDAC6-223ENST00000480525 IGKV2-24A0A0C4DH68 120 aa3.17□□□□□ -1.9
HDAC6-223ENST00000480525 TRBV10-2A0A0K0K1G8 114 aa3.17□□□□□ -1.9
HDAC6-223ENST00000480525 LOC105371267A0A1B0GV96 52 aa3.17□□□□□ -1.9
HDAC6-223ENST00000480525 OXTP01178 125 aa3.17□□□□□ -1.9
HDAC6-223ENST00000480525 CHTF8P0CG12 524 aa3.17□□□□□ -1.9
HDAC6-223ENST00000480525 S100A2P29034 98 aa3.17□□□□□ -1.9
HDAC6-223ENST00000480525 FUSP35637 526 aaKnown RBP eCLIP3.17□□□□□ -1.9
HDAC6-223ENST00000480525 RPL37AP61513 92 aaKnown RBP3.17□□□□□ -1.9
HDAC6-223ENST00000480525 PRR3P79522 188 aaKnown RBP3.17□□□□□ -1.9
HDAC6-223ENST00000480525 GAGE2BQ13066 116 aa3.17□□□□□ -1.9
HDAC6-223ENST00000480525 MEIG1Q5JSS6 88 aa3.17□□□□□ -1.9
HDAC6-223ENST00000480525 SPINK6Q6UWN8 80 aa3.17□□□□□ -1.9
HDAC6-223ENST00000480525 COPS9Q8WXC6 57 aa3.17□□□□□ -1.9
HDAC6-223ENST00000480525 CBY1Q9Y3M2 126 aa3.17□□□□□ -1.9
HDAC6-223ENST00000480525 A0A1W2PNN7 141 aa3.16□□□□□ -1.9
HDAC6-223ENST00000480525 KRTAP29-1A8MX34 341 aaPredicted RBP3.16□□□□□ -1.9
HDAC6-223ENST00000480525 H0Y9J4 135 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms