RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	CCL25	O15444	150 aa		5.83	□□□□□ -1.48
MCF2L-223	ENST00000473345	ATP5L	O75964	103 aa		5.83	□□□□□ -1.48
MCF2L-223	ENST00000473345	XCL1	P47992	114 aa		5.83	□□□□□ -1.48
MCF2L-223	ENST00000473345	RPL39	P62891	51 aa	Known RBP	5.83	□□□□□ -1.48
MCF2L-223	ENST00000473345	SMAGP	Q0VAQ4	97 aa		5.83	□□□□□ -1.48
MCF2L-223	ENST00000473345	PYY3	Q5JQD4	70 aa		5.83	□□□□□ -1.48
MCF2L-223	ENST00000473345	MRPL52	Q86TS9	123 aa	Known RBP	5.83	□□□□□ -1.48
MCF2L-223	ENST00000473345	IFI27L1	Q96BM0	104 aa		5.83	□□□□□ -1.48
MCF2L-223	ENST00000473345	CSDC2	Q9Y534	153 aa	Known RBP	5.83	□□□□□ -1.48
MCF2L-223	ENST00000473345	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	5.82	□□□□□ -1.48
MCF2L-223	ENST00000473345	SYS1-DBNDD2	H3BUS1	97 aa		5.82	□□□□□ -1.48
MCF2L-223	ENST00000473345	GHRH	P01286	108 aa		5.82	□□□□□ -1.48
MCF2L-223	ENST00000473345	FGF6	P10767	208 aa		5.82	□□□□□ -1.48
MCF2L-223	ENST00000473345	AKR1D1	P51857	326 aa		5.82	□□□□□ -1.48
MCF2L-223	ENST00000473345	PTTG1IP	P53801	180 aa		5.82	□□□□□ -1.48
MCF2L-223	ENST00000473345	LINC01545	Q5VT33	79 aa		5.82	□□□□□ -1.48
MCF2L-223	ENST00000473345	PET117	Q6UWS5	81 aa		5.82	□□□□□ -1.48
MCF2L-223	ENST00000473345	PHF5A	Q7RTV0	110 aa	Known RBP	5.82	□□□□□ -1.48
MCF2L-223	ENST00000473345	TMEM141	Q96I45	108 aa		5.82	□□□□□ -1.48
MCF2L-223	ENST00000473345	TMEM101	Q96IK0	257 aa		5.82	□□□□□ -1.48
MCF2L-223	ENST00000473345	CARD19	Q96LW7	228 aa		5.82	□□□□□ -1.48
MCF2L-223	ENST00000473345	SCGB3A1	Q96QR1	104 aa		5.82	□□□□□ -1.48
MCF2L-223	ENST00000473345	MAP1LC3C	Q9BXW4	147 aa		5.82	□□□□□ -1.48
MCF2L-223	ENST00000473345	UBE2D4	Q9Y2X8	147 aa		5.82	□□□□□ -1.48
MCF2L-223	ENST00000473345	TRAV12-1	A0A0B4J245	112 aa		5.81	□□□□□ -1.48
MCF2L-223	ENST00000473345	LINC00959	A0A1B0GUT2	108 aa		5.81	□□□□□ -1.48
MCF2L-223	ENST00000473345	KRTAP1-4	P0C5Y4	121 aa		5.81	□□□□□ -1.48
MCF2L-223	ENST00000473345	SMIM6	P0DI80	62 aa		5.81	□□□□□ -1.48
MCF2L-223	ENST00000473345	MRPS36	P82909	103 aa	Known RBP	5.81	□□□□□ -1.48
MCF2L-223	ENST00000473345	GAGE2B	Q13066	116 aa		5.81	□□□□□ -1.48
MCF2L-223	ENST00000473345	OR5A1	Q8NGJ0	315 aa		5.81	□□□□□ -1.48
MCF2L-223	ENST00000473345	SPANXA1	Q9NS26	97 aa		5.81	□□□□□ -1.48
MCF2L-223	ENST00000473345	IGLV4-3	A0A075B6K6	122 aa		5.8	□□□□□ -1.48
MCF2L-223	ENST00000473345	IGHV1-58	A0A0C4DH39	117 aa		5.8	□□□□□ -1.48
MCF2L-223	ENST00000473345	KRTAP9-6	A0A140TA67	174 aa		5.8	□□□□□ -1.48
MCF2L-223	ENST00000473345	KRTDAP	P60985	99 aa		5.8	□□□□□ -1.48
MCF2L-223	ENST00000473345	SYCN	Q0VAF6	134 aa		5.8	□□□□□ -1.48
MCF2L-223	ENST00000473345	KRTAP7-1	Q8IUC3	87 aa		5.8	□□□□□ -1.48
MCF2L-223	ENST00000473345	AMELX	Q99217	191 aa		5.8	□□□□□ -1.48
MCF2L-223	ENST00000473345	IGLV4-69	A0A075B6H9	119 aa		5.79	□□□□□ -1.48
MCF2L-223	ENST00000473345	C9orf116	Q5BN46	136 aa	Predicted RBP	5.79	□□□□□ -1.48
MCF2L-223	ENST00000473345		Q6ZN92	141 aa		5.79	□□□□□ -1.48
MCF2L-223	ENST00000473345	TEX43	Q6ZNM6	134 aa		5.79	□□□□□ -1.48
MCF2L-223	ENST00000473345	LINC00518	Q8N0U6	118 aa		5.79	□□□□□ -1.48
MCF2L-223	ENST00000473345	FAM168B	A1KXE4	195 aa		5.78	□□□□□ -1.48
MCF2L-223	ENST00000473345	PMVK	Q15126	192 aa		5.78	□□□□□ -1.48
MCF2L-223	ENST00000473345	SS18	Q15532	418 aa		5.78	□□□□□ -1.48
MCF2L-223	ENST00000473345	C1orf137	Q5JT78	98 aa		5.78	□□□□□ -1.48
MCF2L-223	ENST00000473345	PAPPA-AS1	Q5QFB9	102 aa		5.78	□□□□□ -1.48
MCF2L-223	ENST00000473345	CD164L2	Q6UWJ8	174 aa		5.78	□□□□□ -1.48
MCF2L-223	ENST00000473345	FAM19A3	Q7Z5A8	133 aa		5.78	□□□□□ -1.48
MCF2L-223	ENST00000473345	OPRPN	Q99935	248 aa	Predicted RBP	5.78	□□□□□ -1.48
MCF2L-223	ENST00000473345	CST9L	Q9H4G1	147 aa		5.78	□□□□□ -1.48
MCF2L-223	ENST00000473345	CDC42SE2	Q9NRR3	84 aa		5.78	□□□□□ -1.48
MCF2L-223	ENST00000473345	ZNF561-AS1	K7EIQ3	104 aa		5.77	□□□□□ -1.49
MCF2L-223	ENST00000473345	SCGB1D1	O95968	90 aa		5.77	□□□□□ -1.49
MCF2L-223	ENST00000473345	LOC107984640	A0A0U1RRK4	108 aa		5.76	□□□□□ -1.49
MCF2L-223	ENST00000473345	C20orf202	A1L168	122 aa		5.76	□□□□□ -1.49
MCF2L-223	ENST00000473345		F8VRH5	84 aa		5.76	□□□□□ -1.49
MCF2L-223	ENST00000473345		F8WDY8	70 aa		5.76	□□□□□ -1.49
MCF2L-223	ENST00000473345	IGLV7-43	P04211	117 aa		5.76	□□□□□ -1.49
MCF2L-223	ENST00000473345	RNASE13	Q5GAN3	156 aa	Known RBP	5.76	□□□□□ -1.49
MCF2L-223	ENST00000473345	ZC2HC1B	Q5TFG8	222 aa		5.76	□□□□□ -1.49
MCF2L-223	ENST00000473345		Q6ZUT4	128 aa		5.76	□□□□□ -1.49
MCF2L-223	ENST00000473345	ZNF664	Q8N3J9	261 aa		5.76	□□□□□ -1.49
MCF2L-223	ENST00000473345	VCX2	Q9H322	139 aa		5.76	□□□□□ -1.49
MCF2L-223	ENST00000473345	MRPL35	Q9NZE8	188 aa	Known RBP	5.76	□□□□□ -1.49
MCF2L-223	ENST00000473345	C12orf57	Q99622	126 aa		5.75	□□□□□ -1.49
MCF2L-223	ENST00000473345	CHTOP	Q9Y3Y2	248 aa	Known RBP	5.75	□□□□□ -1.49
MCF2L-223	ENST00000473345		H0Y8G0	127 aa		5.74	□□□□□ -1.49
MCF2L-223	ENST00000473345		H0Y9J4	135 aa		5.74	□□□□□ -1.49
MCF2L-223	ENST00000473345	DPM2	O94777	84 aa		5.74	□□□□□ -1.49
MCF2L-223	ENST00000473345	APOM	O95445	188 aa		5.74	□□□□□ -1.49
MCF2L-223	ENST00000473345	IGKC	P01834	107 aa		5.74	□□□□□ -1.49
MCF2L-223	ENST00000473345	IGLC3	P0DOY3	106 aa		5.74	□□□□□ -1.49
MCF2L-223	ENST00000473345	PLN	P26678	52 aa		5.74	□□□□□ -1.49
MCF2L-223	ENST00000473345	UBE2D1	P51668	147 aa		5.74	□□□□□ -1.49
MCF2L-223	ENST00000473345	RNF151	Q2KHN1	245 aa		5.74	□□□□□ -1.49
MCF2L-223	ENST00000473345	C10orf25	Q5T742	122 aa		5.74	□□□□□ -1.49
MCF2L-223	ENST00000473345	C2orf48	Q96LS8	159 aa		5.74	□□□□□ -1.49
MCF2L-223	ENST00000473345	PMCHL2	Q9BQD1	86 aa		5.74	□□□□□ -1.49
MCF2L-223	ENST00000473345	COX7A2L	O14548	114 aa		5.73	□□□□□ -1.49
MCF2L-223	ENST00000473345	MAL	P21145	153 aa		5.73	□□□□□ -1.49
MCF2L-223	ENST00000473345	RPL18A	Q02543	176 aa	Known RBP	5.73	□□□□□ -1.49
MCF2L-223	ENST00000473345	PRR4	Q16378	134 aa		5.73	□□□□□ -1.49
MCF2L-223	ENST00000473345	C5orf38	Q86SI9	138 aa		5.73	□□□□□ -1.49
MCF2L-223	ENST00000473345	IGLV5-45	A0A087WSX0	123 aa		5.72	□□□□□ -1.49
MCF2L-223	ENST00000473345	TINCR	A0A1B0GVN0	87 aa		5.72	□□□□□ -1.49
MCF2L-223	ENST00000473345	C11orf86	A6NJI1	115 aa		5.72	□□□□□ -1.49
MCF2L-223	ENST00000473345	EIF4EBP3	O60516	100 aa	Predicted RBP	5.72	□□□□□ -1.49
MCF2L-223	ENST00000473345	ATOH7	Q8N100	152 aa		5.72	□□□□□ -1.49
MCF2L-223	ENST00000473345	CAMK2N2	Q96S95	79 aa		5.72	□□□□□ -1.49
MCF2L-223	ENST00000473345	FAT4	Q6V0I7	4981 aa		5.72	□□□□□ -1.49
MCF2L-223	ENST00000473345	SEC11A	P67812	179 aa		5.71	□□□□□ -1.5
MCF2L-223	ENST00000473345	S100A12	P80511	92 aa		5.71	□□□□□ -1.5
MCF2L-223	ENST00000473345	LINC00242	Q5T6M2	205 aa		5.71	□□□□□ -1.5
MCF2L-223	ENST00000473345	DIRC1	Q969H9	104 aa		5.71	□□□□□ -1.5
MCF2L-223	ENST00000473345	C2orf88	Q9BSF0	95 aa		5.71	□□□□□ -1.5
MCF2L-223	ENST00000473345	VAMP8	Q9BV40	100 aa		5.71	□□□□□ -1.5
MCF2L-223	ENST00000473345		A0A087WZ39	114 aa		5.7	□□□□□ -1.5

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