RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 M0R2P5 195 aa1.5□□□□□ -2.17
LSM5-209ENST00000468872 ARL14EPLP0DKL9 152 aa1.5□□□□□ -2.17
LSM5-209ENST00000468872 CCSMST1Q4G0I0 132 aa1.5□□□□□ -2.17
LSM5-209ENST00000468872 TEX261Q6UWH6 196 aa1.5□□□□□ -2.17
LSM5-209ENST00000468872 IZUMO2Q6UXV1 221 aa1.5□□□□□ -2.17
LSM5-209ENST00000468872 CASC2Q6XLA1 102 aa1.5□□□□□ -2.17
LSM5-209ENST00000468872 ARL17AQ8IVW1 177 aa1.5□□□□□ -2.17
LSM5-209ENST00000468872 CIB3Q96Q77 187 aaPredicted RBP1.5□□□□□ -2.17
LSM5-209ENST00000468872 TMEM191AQ9H0A3 160 aa1.5□□□□□ -2.17
LSM5-209ENST00000468872 IGHV1-24A0A0C4DH33 117 aa1.49□□□□□ -2.17
LSM5-209ENST00000468872 PNMA8CA0A1B0GUJ8 204 aa1.49□□□□□ -2.17
LSM5-209ENST00000468872 M0R2N4 97 aa1.49□□□□□ -2.17
LSM5-209ENST00000468872 HYPMO75409 117 aa1.49□□□□□ -2.17
LSM5-209ENST00000468872 APOC1P02654 83 aa1.49□□□□□ -2.17
LSM5-209ENST00000468872 EFNA4P52798 201 aa1.49□□□□□ -2.17
LSM5-209ENST00000468872 HAMPP81172 84 aa1.49□□□□□ -2.17
LSM5-209ENST00000468872 DEFB104AQ8WTQ1 72 aa1.49□□□□□ -2.17
LSM5-209ENST00000468872 DPH3Q96FX2 82 aa1.49□□□□□ -2.17
LSM5-209ENST00000468872 TRBV6-4A0A1B0GX49 114 aa1.48□□□□□ -2.17
LSM5-209ENST00000468872 IFITM5A6NNB3 132 aa1.48□□□□□ -2.17
LSM5-209ENST00000468872 EDF1O60869 148 aaKnown RBP1.48□□□□□ -2.17
LSM5-209ENST00000468872 IGHV3-33P01772 117 aa1.48□□□□□ -2.17
LSM5-209ENST00000468872 MIC13Q5XKP0 118 aa1.48□□□□□ -2.17
LSM5-209ENST00000468872 OR10AG1Q8NH19 301 aa1.48□□□□□ -2.17
LSM5-209ENST00000468872 C4orf3Q8WVX3 66 aa1.48□□□□□ -2.17
LSM5-209ENST00000468872 ORMDL1Q9P0S3 153 aa1.48□□□□□ -2.17
LSM5-209ENST00000468872 A0A0G2JMM0 328 aa1.47□□□□□ -2.17
LSM5-209ENST00000468872 A0A1W2PPB8 328 aa1.47□□□□□ -2.17
LSM5-209ENST00000468872 KIR3DP1A8MWS1 328 aa1.47□□□□□ -2.17
LSM5-209ENST00000468872 MIF4GDA9UHW6 222 aaKnown RBP1.47□□□□□ -2.17
LSM5-209ENST00000468872 CDC42EP2O14613 210 aa1.47□□□□□ -2.17
LSM5-209ENST00000468872 COX7CP15954 63 aa1.47□□□□□ -2.17
LSM5-209ENST00000468872 SPRNQ5BIV9 151 aa1.47□□□□□ -2.17
LSM5-209ENST00000468872 ATP11AUNQ6ZP68 121 aa1.47□□□□□ -2.17
LSM5-209ENST00000468872 Q6ZUT4 128 aa1.47□□□□□ -2.17
LSM5-209ENST00000468872 CDC42SE1Q9NRR8 79 aa1.47□□□□□ -2.17
LSM5-209ENST00000468872 ZFP30Q9Y2G7 519 aa1.47□□□□□ -2.17
LSM5-209ENST00000468872 LOC110117498A0A087WWA1 95 aa1.46□□□□□ -2.18
LSM5-209ENST00000468872 NUPR2A6NF83 97 aa1.46□□□□□ -2.18
LSM5-209ENST00000468872 INE1O15225 51 aa1.46□□□□□ -2.18
LSM5-209ENST00000468872 NUPR1O60356 82 aa1.46□□□□□ -2.18
LSM5-209ENST00000468872 RBP4P02753 201 aa1.46□□□□□ -2.18
LSM5-209ENST00000468872 PYYP10082 97 aa1.46□□□□□ -2.18
LSM5-209ENST00000468872 ADCYAP1P18509 176 aa1.46□□□□□ -2.18
LSM5-209ENST00000468872 C5orf17Q8NAS9 161 aa1.46□□□□□ -2.18
LSM5-209ENST00000468872 ATP6V0E2Q8NHE4 81 aa1.46□□□□□ -2.18
LSM5-209ENST00000468872 KLK9Q9UKQ9 250 aa1.46□□□□□ -2.18
LSM5-209ENST00000468872 SNURFQ9Y675 71 aa1.46□□□□□ -2.18
LSM5-209ENST00000468872 DOCK11Q5JSL3 2073 aa1.45□□□□□ -2.18
LSM5-209ENST00000468872 FAM92AA1XBS5 289 aa1.45□□□□□ -2.18
LSM5-209ENST00000468872 FAM25AB3EWG3 89 aa1.45□□□□□ -2.18
LSM5-209ENST00000468872 FAM25CB3EWG5 89 aa1.45□□□□□ -2.18
LSM5-209ENST00000468872 FAM25GB3EWG6 89 aa1.45□□□□□ -2.18
LSM5-209ENST00000468872 F8W1H4 67 aa1.45□□□□□ -2.18
LSM5-209ENST00000468872 LYNX1G3V0Z9 82 aa1.45□□□□□ -2.18
LSM5-209ENST00000468872 CCDC179H3BU77 68 aa1.45□□□□□ -2.18
LSM5-209ENST00000468872 YPEL1O60688 119 aa1.45□□□□□ -2.18
LSM5-209ENST00000468872 IFNGP01579 166 aa1.45□□□□□ -2.18
LSM5-209ENST00000468872 DCDP81605 110 aaKnown RBP1.45□□□□□ -2.18
LSM5-209ENST00000468872 SNX29P2Q8IUI4 249 aa1.45□□□□□ -2.18
LSM5-209ENST00000468872 ATOH7Q8N100 152 aa1.45□□□□□ -2.18
LSM5-209ENST00000468872 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.45□□□□□ -2.18
LSM5-209ENST00000468872 SMIM7Q9BQ49 75 aa1.45□□□□□ -2.18
LSM5-209ENST00000468872 LIMD2Q9BT23 127 aa1.45□□□□□ -2.18
LSM5-209ENST00000468872 SAR1AQ9NR31 198 aa1.45□□□□□ -2.18
LSM5-209ENST00000468872 TRAV12-2A0A075B6T6 113 aa1.44□□□□□ -2.18
LSM5-209ENST00000468872 CCL25O15444 150 aa1.44□□□□□ -2.18
LSM5-209ENST00000468872 ZNF25P17030 456 aaPredicted RBP1.44□□□□□ -2.18
LSM5-209ENST00000468872 GUCA1AP43080 201 aaPredicted RBP1.44□□□□□ -2.18
LSM5-209ENST00000468872 OCIAD2Q56VL3 154 aa1.44□□□□□ -2.18
LSM5-209ENST00000468872 SCIMPQ6UWF3 145 aa1.44□□□□□ -2.18
LSM5-209ENST00000468872 SLC25A26Q70HW3 274 aa1.44□□□□□ -2.18
LSM5-209ENST00000468872 MED12LQ86YW9 2145 aa1.44□□□□□ -2.18
LSM5-209ENST00000468872 TCTEX1D1Q8N7M0 179 aa1.44□□□□□ -2.18
LSM5-209ENST00000468872 ZNF431Q8TF32 576 aaPredicted RBP1.44□□□□□ -2.18
LSM5-209ENST00000468872 TMEM203Q969S6 136 aa1.44□□□□□ -2.18
LSM5-209ENST00000468872 CCDC167Q9P0B6 97 aa1.44□□□□□ -2.18
LSM5-209ENST00000468872 NOP16Q9Y3C1 178 aaKnown RBP1.44□□□□□ -2.18
LSM5-209ENST00000468872 MUC5ACP98088 5654 aa1.44□□□□□ -2.18
LSM5-209ENST00000468872 A0A1W2PRS3 328 aa1.43□□□□□ -2.18
LSM5-209ENST00000468872 H3BRM9 83 aa1.43□□□□□ -2.18
LSM5-209ENST00000468872 IGLV3-1P01715 115 aa1.43□□□□□ -2.18
LSM5-209ENST00000468872 S100A1P23297 94 aa1.43□□□□□ -2.18
LSM5-209ENST00000468872 MPV17LQ2QL34 196 aa1.43□□□□□ -2.18
LSM5-209ENST00000468872 DEFB112Q30KQ8 113 aa1.43□□□□□ -2.18
LSM5-209ENST00000468872 MEIG1Q5JSS6 88 aa1.43□□□□□ -2.18
LSM5-209ENST00000468872 FAM74A1Q5RGS3 127 aa1.43□□□□□ -2.18
LSM5-209ENST00000468872 NCMAPQ5T1S8 102 aa1.43□□□□□ -2.18
LSM5-209ENST00000468872 CSAG1Q6PB30 78 aa1.43□□□□□ -2.18
LSM5-209ENST00000468872 NDUFA11Q86Y39 141 aa1.43□□□□□ -2.18
LSM5-209ENST00000468872 SNRNP25Q9BV90 132 aaKnown RBP1.43□□□□□ -2.18
LSM5-209ENST00000468872 FAIMQ9NVQ4 179 aa1.43□□□□□ -2.18
LSM5-209ENST00000468872 SCN3BQ9NY72 215 aa1.43□□□□□ -2.18
LSM5-209ENST00000468872 HEATR1Q9H583 2144 aaKnown RBP1.43□□□□□ -2.18
LSM5-209ENST00000468872 A0A0J9YY99 117 aa1.42□□□□□ -2.18
LSM5-209ENST00000468872 J3QLW9 94 aa1.42□□□□□ -2.18
LSM5-209ENST00000468872 FGF7P21781 194 aa1.42□□□□□ -2.18
LSM5-209ENST00000468872 BTG2P78543 158 aa1.42□□□□□ -2.18
LSM5-209ENST00000468872 VSTM2AQ8TAG5 236 aa1.42□□□□□ -2.18
LSM5-209ENST00000468872 LSM10Q969L4 123 aaKnown RBP1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms