RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 LINC00526Q96FQ7 95 aa10.56□□□□□ -0.72
HLA-C-205ENST00000466892 TMA7Q9Y2S6 64 aaKnown RBP10.56□□□□□ -0.72
HLA-C-205ENST00000466892 PKD1P98161 4303 aa10.54□□□□□ -0.72
HLA-C-205ENST00000466892 PLEKHB2Q96CS7 222 aa10.54□□□□□ -0.72
HLA-C-205ENST00000466892 LEPROTO15243 131 aa10.53□□□□□ -0.72
HLA-C-205ENST00000466892 C2orf82Q6UX34 121 aa10.53□□□□□ -0.72
HLA-C-205ENST00000466892 UNQ6190/PRO20217Q6UXQ8 127 aa10.53□□□□□ -0.72
HLA-C-205ENST00000466892 SDIM1Q6ZPB5 146 aa10.53□□□□□ -0.72
HLA-C-205ENST00000466892 E9PLD3 99 aa10.52□□□□□ -0.73
HLA-C-205ENST00000466892 TLX1NBP0CAT3 122 aa10.52□□□□□ -0.73
HLA-C-205ENST00000466892 NMUP48645 174 aa10.52□□□□□ -0.73
HLA-C-205ENST00000466892 LINC00474Q9P2X8 69 aa10.52□□□□□ -0.73
HLA-C-205ENST00000466892 C6orf48Q9UBA6 75 aa10.52□□□□□ -0.73
HLA-C-205ENST00000466892 LOC107984640A0A0U1RRK4 108 aa10.51□□□□□ -0.73
HLA-C-205ENST00000466892 FUSP35637 526 aaKnown RBP eCLIP10.51□□□□□ -0.73
HLA-C-205ENST00000466892 C10orf25Q5T742 122 aa10.51□□□□□ -0.73
HLA-C-205ENST00000466892 DNAH11Q96DT5 4516 aa10.5□□□□□ -0.73
HLA-C-205ENST00000466892 KRTAP10-1P60331 282 aa10.5□□□□□ -0.73
HLA-C-205ENST00000466892 HERV-K104P63124 156 aa10.5□□□□□ -0.73
HLA-C-205ENST00000466892 Q6ZSA8 131 aa10.5□□□□□ -0.73
HLA-C-205ENST00000466892 ZNF625Q96I27 306 aaPredicted RBP10.5□□□□□ -0.73
HLA-C-205ENST00000466892 J3QQQ9 107 aa10.49□□□□□ -0.73
HLA-C-205ENST00000466892 COX17Q14061 63 aa10.49□□□□□ -0.73
HLA-C-205ENST00000466892 MYMXA0A1B0GTQ4 84 aa10.48□□□□□ -0.73
HLA-C-205ENST00000466892 LINC00587B1AMM8 73 aa10.48□□□□□ -0.73
HLA-C-205ENST00000466892 NDUFC2-KCTD14E9PQ53 114 aa10.48□□□□□ -0.73
HLA-C-205ENST00000466892 LGALS3P17931 250 aaKnown RBP10.48□□□□□ -0.73
HLA-C-205ENST00000466892 CIRBPQ14011 172 aaKnown RBP10.48□□□□□ -0.73
HLA-C-205ENST00000466892 LINC01620Q4KN68 170 aa10.48□□□□□ -0.73
HLA-C-205ENST00000466892 SCGB1D1O95968 90 aa10.47□□□□□ -0.73
HLA-C-205ENST00000466892 STPG4Q8N801 248 aa10.47□□□□□ -0.73
HLA-C-205ENST00000466892 NDUFA12Q9UI09 145 aa10.47□□□□□ -0.73
HLA-C-205ENST00000466892 HSBP1L1C9JCN9 74 aa10.46□□□□□ -0.73
HLA-C-205ENST00000466892 CDK2AP2O75956 126 aa10.46□□□□□ -0.73
HLA-C-205ENST00000466892 PTTG1IPP53801 180 aa10.45□□□□□ -0.74
HLA-C-205ENST00000466892 JOSD1Q15040 202 aaPredicted RBP10.45□□□□□ -0.74
HLA-C-205ENST00000466892 PKHD1P08F94 4074 aa10.44□□□□□ -0.74
HLA-C-205ENST00000466892 TSPEAR-AS2P59090 65 aa10.44□□□□□ -0.74
HLA-C-205ENST00000466892 RPL18AQ02543 176 aaKnown RBP10.44□□□□□ -0.74
HLA-C-205ENST00000466892 ATOH7Q8N100 152 aa10.44□□□□□ -0.74
HLA-C-205ENST00000466892 SPACA4Q8TDM5 124 aa10.44□□□□□ -0.74
HLA-C-205ENST00000466892 ERG28Q9UKR5 140 aa10.44□□□□□ -0.74
HLA-C-205ENST00000466892 EPPK1P58107 5090 aaKnown RBP10.44□□□□□ -0.74
HLA-C-205ENST00000466892 A0A096LNI7 61 aa10.43□□□□□ -0.74
HLA-C-205ENST00000466892 Q6ZRP5 223 aa10.43□□□□□ -0.74
HLA-C-205ENST00000466892 C9orf116Q5BN46 136 aaPredicted RBP10.42□□□□□ -0.74
HLA-C-205ENST00000466892 GAGE2BQ13066 116 aa10.41□□□□□ -0.74
HLA-C-205ENST00000466892 FAM30AQ9NZY2 134 aa10.41□□□□□ -0.74
HLA-C-205ENST00000466892 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.41□□□□□ -0.74
HLA-C-205ENST00000466892 IGKV2D-26A0A0A0MRZ7 120 aa10.4□□□□□ -0.74
HLA-C-205ENST00000466892 IGKV2-24A0A0C4DH68 120 aa10.4□□□□□ -0.74
HLA-C-205ENST00000466892 ANKRD39Q53RE8 183 aa10.4□□□□□ -0.74
HLA-C-205ENST00000466892 MAJINQ3KP22 176 aa10.39□□□□□ -0.75
HLA-C-205ENST00000466892 MEIG1Q5JSS6 88 aa10.39□□□□□ -0.75
HLA-C-205ENST00000466892 DNAH5Q8TE73 4624 aa10.38□□□□□ -0.75
HLA-C-205ENST00000466892 CHTF8P0CG12 524 aa10.38□□□□□ -0.75
HLA-C-205ENST00000466892 PFN2P35080 140 aa10.38□□□□□ -0.75
HLA-C-205ENST00000466892 GAGE2EQ4V326 116 aa10.38□□□□□ -0.75
HLA-C-205ENST00000466892 PLAC8Q9NZF1 115 aa10.38□□□□□ -0.75
HLA-C-205ENST00000466892 GAGE2DQ9UEU5 116 aa10.38□□□□□ -0.75
HLA-C-205ENST00000466892 ZNF815PA8K554 130 aa10.37□□□□□ -0.75
HLA-C-205ENST00000466892 EPM2AB3EWF7 344 aa10.37□□□□□ -0.75
HLA-C-205ENST00000466892 PANO1I0J062 215 aa10.37□□□□□ -0.75
HLA-C-205ENST00000466892 SCXQ7RTU7 201 aa10.37□□□□□ -0.75
HLA-C-205ENST00000466892 CIRBP-AS1Q8TBR5 109 aa10.37□□□□□ -0.75
HLA-C-205ENST00000466892 DPH3Q96FX2 82 aa10.37□□□□□ -0.75
HLA-C-205ENST00000466892 A0A087WYN8 130 aa10.36□□□□□ -0.75
HLA-C-205ENST00000466892 A0A0J9YXY3 114 aa10.36□□□□□ -0.75
HLA-C-205ENST00000466892 TIMM17BO60830 172 aa10.36□□□□□ -0.75
HLA-C-205ENST00000466892 XGP55808 180 aa10.36□□□□□ -0.75
HLA-C-205ENST00000466892 LINC00158P58513 81 aa10.36□□□□□ -0.75
HLA-C-205ENST00000466892 PYY3Q5JQD4 70 aa10.36□□□□□ -0.75
HLA-C-205ENST00000466892 DYNC1H1Q14204 4646 aaKnown RBP10.35□□□□□ -0.75
HLA-C-205ENST00000466892 VAMP8Q9BV40 100 aa10.35□□□□□ -0.75
HLA-C-205ENST00000466892 SMIM13P0DJ93 91 aa10.34□□□□□ -0.75
HLA-C-205ENST00000466892 C9orf129Q5T035 196 aaKnown RBP10.34□□□□□ -0.75
HLA-C-205ENST00000466892 PLA2G2DQ9UNK4 145 aa10.34□□□□□ -0.75
HLA-C-205ENST00000466892 LRP1BQ9NZR2 4599 aa10.34□□□□□ -0.75
HLA-C-205ENST00000466892 SND1-IT1Q9HBX3 110 aa10.33□□□□□ -0.76
HLA-C-205ENST00000466892 XAGE1AQ9HD64 81 aa10.33□□□□□ -0.76
HLA-C-205ENST00000466892 SCGB1D4Q6XE38 83 aa10.32□□□□□ -0.76
HLA-C-205ENST00000466892 PCP2Q8IVA1 136 aa10.32□□□□□ -0.76
HLA-C-205ENST00000466892 LOC107984156A0A0G2JMH3 177 aa10.31□□□□□ -0.76
HLA-C-205ENST00000466892 TMEM238C9JI98 176 aa10.31□□□□□ -0.76
HLA-C-205ENST00000466892 ARL17AQ8IVW1 177 aa10.31□□□□□ -0.76
HLA-C-205ENST00000466892 MIR7-3HGQ8N6C7 128 aa10.31□□□□□ -0.76
HLA-C-205ENST00000466892 TTTY13Q9BZ97 58 aa10.31□□□□□ -0.76
HLA-C-205ENST00000466892 DLEU1O43261 78 aa10.3□□□□□ -0.76
HLA-C-205ENST00000466892 Q6ZVH6 145 aa10.3□□□□□ -0.76
HLA-C-205ENST00000466892 TP73-AS1Q9UF72 201 aa10.3□□□□□ -0.76
HLA-C-205ENST00000466892 BIRC6Q9NR09 4857 aa10.3□□□□□ -0.76
HLA-C-205ENST00000466892 IGLV5-37A0A075B6J1 123 aa10.29□□□□□ -0.76
HLA-C-205ENST00000466892 A0A0U1RRA0 63 aa10.29□□□□□ -0.76
HLA-C-205ENST00000466892 A0A1W2PNN7 141 aa10.29□□□□□ -0.76
HLA-C-205ENST00000466892 COX8AP10176 69 aa10.29□□□□□ -0.76
HLA-C-205ENST00000466892 RPL24P83731 157 aaKnown RBP10.29□□□□□ -0.76
HLA-C-205ENST00000466892 SPATA45Q537H7 98 aa10.29□□□□□ -0.76
HLA-C-205ENST00000466892 BOD1L2Q8IYS8 172 aa10.29□□□□□ -0.76
HLA-C-205ENST00000466892 LITAFQ99732 161 aa10.29□□□□□ -0.76
HLA-C-205ENST00000466892 PPDPFQ9H3Y8 114 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms