RNA–Protein interactions for RNA: ENST00000462777.1

HLA-F-222, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 779 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-222ENST00000462777 REG3GQ6UW15 175 aa12.49□□□□□ -0.41
HLA-F-222ENST00000462777 VAMP8Q9BV40 100 aa12.49□□□□□ -0.41
HLA-F-222ENST00000462777 CSDC2Q9Y534 153 aaKnown RBP12.49□□□□□ -0.41
HLA-F-222ENST00000462777 H0Y8G0 127 aa12.48□□□□□ -0.41
HLA-F-222ENST00000462777 MRPS36P82909 103 aaKnown RBP12.48□□□□□ -0.41
HLA-F-222ENST00000462777 PMVKQ15126 192 aa12.48□□□□□ -0.41
HLA-F-222ENST00000462777 OR5A1Q8NGJ0 315 aa12.48□□□□□ -0.41
HLA-F-222ENST00000462777 A0A096LNI7 61 aa12.47□□□□□ -0.41
HLA-F-222ENST00000462777 F8VRH5 84 aa12.47□□□□□ -0.41
HLA-F-222ENST00000462777 PLNP26678 52 aa12.47□□□□□ -0.41
HLA-F-222ENST00000462777 XCL1P47992 114 aa12.47□□□□□ -0.41
HLA-F-222ENST00000462777 FOXI1Q12951 378 aa12.47□□□□□ -0.41
HLA-F-222ENST00000462777 SPINK6Q6UWN8 80 aa12.47□□□□□ -0.41
HLA-F-222ENST00000462777 UBE2D4Q9Y2X8 147 aa12.47□□□□□ -0.41
HLA-F-222ENST00000462777 IGHV1-58A0A0C4DH39 117 aa12.46□□□□□ -0.41
HLA-F-222ENST00000462777 DPM2O94777 84 aa12.46□□□□□ -0.41
HLA-F-222ENST00000462777 IGLV4-3A0A075B6K6 122 aa12.45□□□□□ -0.42
HLA-F-222ENST00000462777 A0A0J9YXV3 536 aa12.45□□□□□ -0.42
HLA-F-222ENST00000462777 HSBP1L1C9JCN9 74 aa12.45□□□□□ -0.42
HLA-F-222ENST00000462777 CARD19Q96LW7 228 aa12.45□□□□□ -0.42
HLA-F-222ENST00000462777 ZNF561-AS1K7EIQ3 104 aa12.44□□□□□ -0.42
HLA-F-222ENST00000462777 SS18Q15532 418 aa12.44□□□□□ -0.42
HLA-F-222ENST00000462777 Q6ZRP5 223 aa12.44□□□□□ -0.42
HLA-F-222ENST00000462777 CHTOPQ9Y3Y2 248 aaKnown RBP12.44□□□□□ -0.42
HLA-F-222ENST00000462777 TNXBP22105 4242 aa12.43□□□□□ -0.42
HLA-F-222ENST00000462777 LINC00959A0A1B0GUT2 108 aa12.43□□□□□ -0.42
HLA-F-222ENST00000462777 TSTD3H0UI37 97 aa12.43□□□□□ -0.42
HLA-F-222ENST00000462777 CCL25O15444 150 aa12.43□□□□□ -0.42
HLA-F-222ENST00000462777 IGKCP01834 107 aa12.43□□□□□ -0.42
HLA-F-222ENST00000462777 AMELXQ99217 191 aa12.43□□□□□ -0.42
HLA-F-222ENST00000462777 VCX2Q9H322 139 aa12.43□□□□□ -0.42
HLA-F-222ENST00000462777 CST9LQ9H4G1 147 aa12.43□□□□□ -0.42
HLA-F-222ENST00000462777 C2orf88Q9BSF0 95 aa12.42□□□□□ -0.42
HLA-F-222ENST00000462777 MRPL35Q9NZE8 188 aaKnown RBP12.42□□□□□ -0.42
HLA-F-222ENST00000462777 SYCNQ0VAF6 134 aa12.41□□□□□ -0.42
HLA-F-222ENST00000462777 LINC00526Q96FQ7 95 aa12.41□□□□□ -0.42
HLA-F-222ENST00000462777 LRP2P98164 4655 aa12.41□□□□□ -0.42
HLA-F-222ENST00000462777 CD164L2Q6UWJ8 174 aa12.4□□□□□ -0.42
HLA-F-222ENST00000462777 ATOH7Q8N100 152 aa12.4□□□□□ -0.42
HLA-F-222ENST00000462777 KRTAP10-8P60410 259 aa12.39□□□□□ -0.43
HLA-F-222ENST00000462777 SPATA45Q537H7 98 aa12.39□□□□□ -0.43
HLA-F-222ENST00000462777 ZNF664Q8N3J9 261 aa12.39□□□□□ -0.43
HLA-F-222ENST00000462777 PMCHL2Q9BQD1 86 aa12.39□□□□□ -0.43
HLA-F-222ENST00000462777 PAM16Q9Y3D7 125 aa12.39□□□□□ -0.43
HLA-F-222ENST00000462777 Q6ZUT4 128 aa12.38□□□□□ -0.43
HLA-F-222ENST00000462777 IGLC3P0DOY3 106 aa12.37□□□□□ -0.43
HLA-F-222ENST00000462777 MALP21145 153 aa12.37□□□□□ -0.43
HLA-F-222ENST00000462777 SEC11AP67812 179 aa12.37□□□□□ -0.43
HLA-F-222ENST00000462777 SRSF9Q13242 221 aaKnown RBP eCLIP12.37□□□□□ -0.43
HLA-F-222ENST00000462777 FAM104AQ969W3 186 aa12.37□□□□□ -0.43
HLA-F-222ENST00000462777 CDC42SE2Q9NRR3 84 aa12.37□□□□□ -0.43
HLA-F-222ENST00000462777 LOC107984640A0A0U1RRK4 108 aa12.36□□□□□ -0.43
HLA-F-222ENST00000462777 PTTG1IPP53801 180 aa12.36□□□□□ -0.43
HLA-F-222ENST00000462777 GAGE2BQ13066 116 aa12.36□□□□□ -0.43
HLA-F-222ENST00000462777 FAM19A3Q7Z5A8 133 aa12.36□□□□□ -0.43
HLA-F-222ENST00000462777 IGLV4-69A0A075B6H9 119 aa12.35□□□□□ -0.43
HLA-F-222ENST00000462777 OPRPNQ99935 248 aaPredicted RBP12.35□□□□□ -0.43
HLA-F-222ENST00000462777 TINCRA0A1B0GVN0 87 aa12.33□□□□□ -0.44
HLA-F-222ENST00000462777 C11orf86A6NJI1 115 aa12.33□□□□□ -0.44
HLA-F-222ENST00000462777 COX7A2LO14548 114 aa12.33□□□□□ -0.44
HLA-F-222ENST00000462777 HERVK_113P61574 105 aa12.33□□□□□ -0.44
HLA-F-222ENST00000462777 ZC2HC1BQ5TFG8 222 aa12.33□□□□□ -0.44
HLA-F-222ENST00000462777 UBE2D1P51668 147 aa12.32□□□□□ -0.44
HLA-F-222ENST00000462777 CAMK2N2Q96S95 79 aa12.31□□□□□ -0.44
HLA-F-222ENST00000462777 UQCR10Q9UDW1 63 aa12.31□□□□□ -0.44
HLA-F-222ENST00000462777 HERVK_113P63121 156 aa12.3□□□□□ -0.44
HLA-F-222ENST00000462777 MIEN1Q9BRT3 115 aa12.3□□□□□ -0.44
HLA-F-222ENST00000462777 PRO1933Q9H354 126 aa12.3□□□□□ -0.44
HLA-F-222ENST00000462777 IGLV5-45A0A087WSX0 123 aa12.29□□□□□ -0.44
HLA-F-222ENST00000462777 APOMO95445 188 aa12.29□□□□□ -0.44
HLA-F-222ENST00000462777 ANKRD39Q53RE8 183 aa12.29□□□□□ -0.44
HLA-F-222ENST00000462777 RNF213Q63HN8 5207 aa12.28□□□□□ -0.44
HLA-F-222ENST00000462777 E9PLD3 99 aa12.28□□□□□ -0.44
HLA-F-222ENST00000462777 DLEU1O43261 78 aa12.28□□□□□ -0.44
HLA-F-222ENST00000462777 COX8AP10176 69 aa12.28□□□□□ -0.44
HLA-F-222ENST00000462777 C2orf48Q96LS8 159 aa12.28□□□□□ -0.44
HLA-F-222ENST00000462777 GEMIN7Q9H840 131 aaKnown RBP12.28□□□□□ -0.44
HLA-F-222ENST00000462777 TRAV13-1A0A0B4J241 112 aa12.27□□□□□ -0.45
HLA-F-222ENST00000462777 A0A1W2PNN7 141 aa12.27□□□□□ -0.45
HLA-F-222ENST00000462777 H3BRM9 83 aa12.27□□□□□ -0.45
HLA-F-222ENST00000462777 ZNF22P17026 224 aaPredicted RBP12.27□□□□□ -0.45
HLA-F-222ENST00000462777 RNASE13Q5GAN3 156 aaKnown RBP12.27□□□□□ -0.45
HLA-F-222ENST00000462777 TMEM170BQ5T4T1 132 aa12.27□□□□□ -0.45
HLA-F-222ENST00000462777 SLC25A34Q6PIV7 304 aa12.27□□□□□ -0.45
HLA-F-222ENST00000462777 DDTP30046 118 aa12.26□□□□□ -0.45
HLA-F-222ENST00000462777 RPL18AQ02543 176 aaKnown RBP12.26□□□□□ -0.45
HLA-F-222ENST00000462777 C9orf116Q5BN46 136 aaPredicted RBP12.26□□□□□ -0.45
HLA-F-222ENST00000462777 PSORS1C2Q9UIG4 136 aa12.25□□□□□ -0.45
HLA-F-222ENST00000462777 TMEM223A0PJW6 202 aa12.24□□□□□ -0.45
HLA-F-222ENST00000462777 PCP4L1A6NKN8 68 aa12.24□□□□□ -0.45
HLA-F-222ENST00000462777 C1orf137Q5JT78 98 aa12.24□□□□□ -0.45
HLA-F-222ENST00000462777 LINC00242Q5T6M2 205 aa12.24□□□□□ -0.45
HLA-F-222ENST00000462777 C5orf38Q86SI9 138 aa12.24□□□□□ -0.45
HLA-F-222ENST00000462777 NMUP48645 174 aa12.23□□□□□ -0.45
HLA-F-222ENST00000462777 BOD1L2Q8IYS8 172 aa12.23□□□□□ -0.45
HLA-F-222ENST00000462777 LINC00469Q8N7U9 141 aa12.23□□□□□ -0.45
HLA-F-222ENST00000462777 C14orf144Q96I85 54 aa12.23□□□□□ -0.45
HLA-F-222ENST00000462777 SPAG11BQ08648 103 aa12.22□□□□□ -0.45
HLA-F-222ENST00000462777 RNF151Q2KHN1 245 aa12.22□□□□□ -0.45
HLA-F-222ENST00000462777 PLEKHB2Q96CS7 222 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms