RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 UNQ6190/PRO20217Q6UXQ8 127 aa4.11□□□□□ -1.75
SF3B1-206ENST00000462613 SDIM1Q6ZPB5 146 aa4.11□□□□□ -1.75
SF3B1-206ENST00000462613 PLEKHB2Q96CS7 222 aa4.11□□□□□ -1.75
SF3B1-206ENST00000462613 DNAH10Q8IVF4 4471 aa4.11□□□□□ -1.75
SF3B1-206ENST00000462613 IGLV5-39A0A0G2JS06 123 aa4.1□□□□□ -1.75
SF3B1-206ENST00000462613 TMEM223A0PJW6 202 aa4.1□□□□□ -1.75
SF3B1-206ENST00000462613 NDUFC2-KCTD14E9PQ53 114 aa4.1□□□□□ -1.75
SF3B1-206ENST00000462613 FAM229AH3BQW9 127 aa4.1□□□□□ -1.75
SF3B1-206ENST00000462613 TLX1NBP0CAT3 122 aa4.1□□□□□ -1.75
SF3B1-206ENST00000462613 C3orf79P0CE67 100 aa4.1□□□□□ -1.75
SF3B1-206ENST00000462613 LGALS3P17931 250 aaKnown RBP4.1□□□□□ -1.75
SF3B1-206ENST00000462613 PTTG1IPP53801 180 aa4.1□□□□□ -1.75
SF3B1-206ENST00000462613 Q6ZSA8 131 aa4.1□□□□□ -1.75
SF3B1-206ENST00000462613 C6orf48Q9UBA6 75 aa4.1□□□□□ -1.75
SF3B1-206ENST00000462613 DNAH17Q9UFH2 4485 aa4.1□□□□□ -1.75
SF3B1-206ENST00000462613 A0A096LNI7 61 aa4.09□□□□□ -1.75
SF3B1-206ENST00000462613 MYMXA0A1B0GTQ4 84 aa4.09□□□□□ -1.75
SF3B1-206ENST00000462613 HERV-K104P63124 156 aa4.09□□□□□ -1.75
SF3B1-206ENST00000462613 COX17Q14061 63 aa4.09□□□□□ -1.75
SF3B1-206ENST00000462613 GAGE2EQ4V326 116 aa4.09□□□□□ -1.75
SF3B1-206ENST00000462613 C10orf25Q5T742 122 aa4.09□□□□□ -1.75
SF3B1-206ENST00000462613 LINC01545Q5VT33 79 aa4.09□□□□□ -1.75
SF3B1-206ENST00000462613 SCXQ7RTU7 201 aa4.09□□□□□ -1.75
SF3B1-206ENST00000462613 HIST3H2BBQ8N257 126 aa4.09□□□□□ -1.75
SF3B1-206ENST00000462613 STPG4Q8N801 248 aa4.09□□□□□ -1.75
SF3B1-206ENST00000462613 SPACA4Q8TDM5 124 aa4.09□□□□□ -1.75
SF3B1-206ENST00000462613 C7orf33Q8WU49 177 aa4.09□□□□□ -1.75
SF3B1-206ENST00000462613 PMCHL2Q9BQD1 86 aa4.09□□□□□ -1.75
SF3B1-206ENST00000462613 FAM30AQ9NZY2 134 aa4.09□□□□□ -1.75
SF3B1-206ENST00000462613 GAGE2DQ9UEU5 116 aa4.09□□□□□ -1.75
SF3B1-206ENST00000462613 DNAH2Q9P225 4427 aa4.09□□□□□ -1.75
SF3B1-206ENST00000462613 A0A087WYN8 130 aa4.08□□□□□ -1.76
SF3B1-206ENST00000462613 HSBP1L1C9JCN9 74 aa4.08□□□□□ -1.76
SF3B1-206ENST00000462613 J3QQQ9 107 aa4.08□□□□□ -1.76
SF3B1-206ENST00000462613 LEPROTO15243 131 aa4.08□□□□□ -1.76
SF3B1-206ENST00000462613 PLA2G1BP04054 148 aaKnown RBP4.08□□□□□ -1.76
SF3B1-206ENST00000462613 CHTF8P0CG12 524 aa4.08□□□□□ -1.76
SF3B1-206ENST00000462613 NMUP48645 174 aa4.08□□□□□ -1.76
SF3B1-206ENST00000462613 SNRPEP62304 92 aaKnown RBP4.08□□□□□ -1.76
SF3B1-206ENST00000462613 CIRBPQ14011 172 aaKnown RBP4.08□□□□□ -1.76
SF3B1-206ENST00000462613 MEIG1Q5JSS6 88 aa4.08□□□□□ -1.76
SF3B1-206ENST00000462613 CIRBP-AS1Q8TBR5 109 aa4.08□□□□□ -1.76
SF3B1-206ENST00000462613 NDUFA12Q9UI09 145 aa4.08□□□□□ -1.76
SF3B1-206ENST00000462613 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-206ENST00000462613 EPM2AB3EWF7 344 aa4.07□□□□□ -1.76
SF3B1-206ENST00000462613 E9PLD3 99 aa4.07□□□□□ -1.76
SF3B1-206ENST00000462613 PFN2P35080 140 aa4.07□□□□□ -1.76
SF3B1-206ENST00000462613 XGP55808 180 aa4.07□□□□□ -1.76
SF3B1-206ENST00000462613 LINC00158P58513 81 aa4.07□□□□□ -1.76
SF3B1-206ENST00000462613 C9orf116Q5BN46 136 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-206ENST00000462613 ZNF625Q96I27 306 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-206ENST00000462613 HIST1H2BLQ99880 126 aa4.07□□□□□ -1.76
SF3B1-206ENST00000462613 ERG28Q9UKR5 140 aa4.07□□□□□ -1.76
SF3B1-206ENST00000462613 PKD1P98161 4303 aa4.07□□□□□ -1.76
SF3B1-206ENST00000462613 C5orf52A6NGY3 159 aa4.06□□□□□ -1.76
SF3B1-206ENST00000462613 SMR3BP02814 79 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-206ENST00000462613 HAMPP81172 84 aa4.06□□□□□ -1.76
SF3B1-206ENST00000462613 Q6ZRP5 223 aa4.06□□□□□ -1.76
SF3B1-206ENST00000462613 LINC00528Q8N1L1 170 aa4.06□□□□□ -1.76
SF3B1-206ENST00000462613 Q8N1X5 172 aa4.06□□□□□ -1.76
SF3B1-206ENST00000462613 MIEN1Q9BRT3 115 aa4.06□□□□□ -1.76
SF3B1-206ENST00000462613 PLAC8Q9NZF1 115 aa4.06□□□□□ -1.76
SF3B1-206ENST00000462613 FAT2Q9NYQ8 4349 aa4.06□□□□□ -1.76
SF3B1-206ENST00000462613 SCGB1D1O95968 90 aa4.05□□□□□ -1.76
SF3B1-206ENST00000462613 RPL24P83731 157 aaKnown RBP4.05□□□□□ -1.76
SF3B1-206ENST00000462613 Q5VSD8 79 aa4.05□□□□□ -1.76
SF3B1-206ENST00000462613 FAM19A5Q7Z5A7 132 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-206ENST00000462613 NKAPP1Q8N9T2 125 aa4.05□□□□□ -1.76
SF3B1-206ENST00000462613 XAGE1AQ9HD64 81 aa4.05□□□□□ -1.76
SF3B1-206ENST00000462613 TMA7Q9Y2S6 64 aaKnown RBP4.05□□□□□ -1.76
SF3B1-206ENST00000462613 PANO1I0J062 215 aa4.04□□□□□ -1.76
SF3B1-206ENST00000462613 M0QXV9 152 aa4.04□□□□□ -1.76
SF3B1-206ENST00000462613 RPL37AP61513 92 aaKnown RBP4.04□□□□□ -1.76
SF3B1-206ENST00000462613 UBE2BP63146 152 aa4.04□□□□□ -1.76
SF3B1-206ENST00000462613 LBHQ53QV2 105 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-206ENST00000462613 SCGB1D4Q6XE38 83 aa4.04□□□□□ -1.76
SF3B1-206ENST00000462613 HECTD4Q9Y4D8 3996 aa4.04□□□□□ -1.76
SF3B1-206ENST00000462613 A0A0U1RRA0 63 aa4.03□□□□□ -1.76
SF3B1-206ENST00000462613 ZNF815PA8K554 130 aa4.03□□□□□ -1.76
SF3B1-206ENST00000462613 SMIM13P0DJ93 91 aa4.03□□□□□ -1.76
SF3B1-206ENST00000462613 S100A12P80511 92 aa4.03□□□□□ -1.76
SF3B1-206ENST00000462613 ATOH7Q8N100 152 aa4.03□□□□□ -1.76
SF3B1-206ENST00000462613 COPS9Q8WXC6 57 aa4.03□□□□□ -1.76
SF3B1-206ENST00000462613 SND1-IT1Q9HBX3 110 aa4.03□□□□□ -1.76
SF3B1-206ENST00000462613 TP73-AS1Q9UF72 201 aa4.03□□□□□ -1.76
SF3B1-206ENST00000462613 PKHD1P08F94 4074 aa4.03□□□□□ -1.76
SF3B1-206ENST00000462613 EPPK1P58107 5090 aaKnown RBP4.03□□□□□ -1.76
SF3B1-206ENST00000462613 A0A1W2PNN7 141 aa4.02□□□□□ -1.77
SF3B1-206ENST00000462613 TMEM238C9JI98 176 aa4.02□□□□□ -1.77
SF3B1-206ENST00000462613 TSPEAR-AS2P59090 65 aa4.02□□□□□ -1.77
SF3B1-206ENST00000462613 C9orf129Q5T035 196 aaKnown RBP4.02□□□□□ -1.77
SF3B1-206ENST00000462613 MRPL55Q7Z7F7 128 aaKnown RBP4.02□□□□□ -1.77
SF3B1-206ENST00000462613 MIR7-3HGQ8N6C7 128 aa4.02□□□□□ -1.77
SF3B1-206ENST00000462613 PLA2G2DQ9UNK4 145 aa4.02□□□□□ -1.77
SF3B1-206ENST00000462613 A0A0J9YXY3 114 aa4.01□□□□□ -1.77
SF3B1-206ENST00000462613 FAM168BA1KXE4 195 aa4.01□□□□□ -1.77
SF3B1-206ENST00000462613 PHF5AQ7RTV0 110 aaKnown RBP4.01□□□□□ -1.77
SF3B1-206ENST00000462613 C22orf24Q9Y442 160 aa4.01□□□□□ -1.77
SF3B1-206ENST00000462613 IGKV2D-26A0A0A0MRZ7 120 aa4□□□□□ -1.77
SF3B1-206ENST00000462613 TIMM17BO60830 172 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms