RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 SCXQ7RTU7 201 aa9.02□□□□□ -0.97
SMPD4-215ENST00000457039 C6orf48Q9UBA6 75 aa9.02□□□□□ -0.97
SMPD4-215ENST00000457039 IGLV5-39A0A0G2JS06 123 aa9.01□□□□□ -0.97
SMPD4-215ENST00000457039 PRSS2P07478 247 aa9.01□□□□□ -0.97
SMPD4-215ENST00000457039 CHTF8P0CG12 524 aa9.01□□□□□ -0.97
SMPD4-215ENST00000457039 CIRBP-AS1Q8TBR5 109 aa9.01□□□□□ -0.97
SMPD4-215ENST00000457039 TOMM7Q9P0U1 55 aa9.01□□□□□ -0.97
SMPD4-215ENST00000457039 A0A096LNI7 61 aa9□□□□□ -0.97
SMPD4-215ENST00000457039 C6orf226Q5I0X4 101 aa9□□□□□ -0.97
SMPD4-215ENST00000457039 SPACA4Q8TDM5 124 aa9□□□□□ -0.97
SMPD4-215ENST00000457039 PKIGQ9Y2B9 76 aa9□□□□□ -0.97
SMPD4-215ENST00000457039 TRBV30A0A0K0K1B3 111 aa8.99□□□□□ -0.97
SMPD4-215ENST00000457039 LOC107984640A0A0U1RRK4 108 aa8.99□□□□□ -0.97
SMPD4-215ENST00000457039 H0Y8G0 127 aa8.99□□□□□ -0.97
SMPD4-215ENST00000457039 TLX1NBP0CAT3 122 aa8.99□□□□□ -0.97
SMPD4-215ENST00000457039 TMEM170BQ5T4T1 132 aa8.99□□□□□ -0.97
SMPD4-215ENST00000457039 COX7B2Q8TF08 81 aa8.99□□□□□ -0.97
SMPD4-215ENST00000457039 TMEM223A0PJW6 202 aa8.98□□□□□ -0.97
SMPD4-215ENST00000457039 CXCL5P42830 114 aa8.98□□□□□ -0.97
SMPD4-215ENST00000457039 CKS1BP61024 79 aa8.98□□□□□ -0.97
SMPD4-215ENST00000457039 MAP1LC3CQ9BXW4 147 aa8.98□□□□□ -0.97
SMPD4-215ENST00000457039 IGKV2-24A0A0C4DH68 120 aa8.97□□□□□ -0.97
SMPD4-215ENST00000457039 PTTG1IPP53801 180 aa8.97□□□□□ -0.97
SMPD4-215ENST00000457039 VPS13BQ7Z7G8 4022 aa8.96□□□□□ -0.97
SMPD4-215ENST00000457039 ABCA13Q86UQ4 5058 aa8.96□□□□□ -0.97
SMPD4-215ENST00000457039 SYS1-DBNDD2H3BUS1 97 aa8.96□□□□□ -0.98
SMPD4-215ENST00000457039 Q8N1X5 172 aa8.96□□□□□ -0.98
SMPD4-215ENST00000457039 LINC00474Q9P2X8 69 aa8.96□□□□□ -0.98
SMPD4-215ENST00000457039 A0A087WYN8 130 aa8.95□□□□□ -0.98
SMPD4-215ENST00000457039 SMR3BP02814 79 aaPredicted RBP8.95□□□□□ -0.98
SMPD4-215ENST00000457039 PLNP26678 52 aa8.95□□□□□ -0.98
SMPD4-215ENST00000457039 GAGE2BQ13066 116 aa8.95□□□□□ -0.98
SMPD4-215ENST00000457039 MAJINQ3KP22 176 aa8.95□□□□□ -0.98
SMPD4-215ENST00000457039 C9orf116Q5BN46 136 aaPredicted RBP8.95□□□□□ -0.98
SMPD4-215ENST00000457039 Q6ZRP5 223 aa8.95□□□□□ -0.98
SMPD4-215ENST00000457039 PMCHL2Q9BQD1 86 aa8.95□□□□□ -0.98
SMPD4-215ENST00000457039 DPM2O94777 84 aa8.94□□□□□ -0.98
SMPD4-215ENST00000457039 C3orf79P0CE67 100 aa8.94□□□□□ -0.98
SMPD4-215ENST00000457039 RPL18AQ02543 176 aaKnown RBP8.94□□□□□ -0.98
SMPD4-215ENST00000457039 PLAC8Q9NZF1 115 aa8.94□□□□□ -0.98
SMPD4-215ENST00000457039 EPM2AB3EWF7 344 aa8.93□□□□□ -0.98
SMPD4-215ENST00000457039 NDUFC2-KCTD14E9PQ53 114 aa8.93□□□□□ -0.98
SMPD4-215ENST00000457039 IGKCP01834 107 aa8.93□□□□□ -0.98
SMPD4-215ENST00000457039 LINC01545Q5VT33 79 aa8.93□□□□□ -0.98
SMPD4-215ENST00000457039 PET117Q6UWS5 81 aa8.93□□□□□ -0.98
SMPD4-215ENST00000457039 HIST3H2BBQ8N257 126 aa8.93□□□□□ -0.98
SMPD4-215ENST00000457039 STPG4Q8N801 248 aa8.92□□□□□ -0.98
SMPD4-215ENST00000457039 KRTAP4-5Q9BYR2 181 aa8.92□□□□□ -0.98
SMPD4-215ENST00000457039 DPH3Q96FX2 82 aa8.91□□□□□ -0.98
SMPD4-215ENST00000457039 ZNF625Q96I27 306 aaPredicted RBP8.91□□□□□ -0.98
SMPD4-215ENST00000457039 S100A6P06703 90 aa8.9□□□□□ -0.98
SMPD4-215ENST00000457039 Q5VSD8 79 aa8.9□□□□□ -0.98
SMPD4-215ENST00000457039 LINC00528Q8N1L1 170 aa8.9□□□□□ -0.98
SMPD4-215ENST00000457039 HIST1H2BLQ99880 126 aa8.9□□□□□ -0.98
SMPD4-215ENST00000457039 A0A1W2PNN7 141 aa8.89□□□□□ -0.99
SMPD4-215ENST00000457039 KRTDAPP60985 99 aa8.89□□□□□ -0.99
SMPD4-215ENST00000457039 GAGE2EQ4V326 116 aa8.89□□□□□ -0.99
SMPD4-215ENST00000457039 SFTA2Q6UW10 78 aa8.89□□□□□ -0.99
SMPD4-215ENST00000457039 GAGE2DQ9UEU5 116 aa8.89□□□□□ -0.99
SMPD4-215ENST00000457039 TSPEAR-AS2P59090 65 aa8.88□□□□□ -0.99
SMPD4-215ENST00000457039 SNRPEP62304 92 aaKnown RBP8.88□□□□□ -0.99
SMPD4-215ENST00000457039 C9orf129Q5T035 196 aaKnown RBP8.88□□□□□ -0.99
SMPD4-215ENST00000457039 PCLOQ9Y6V0 5065 aa8.88□□□□□ -0.99
SMPD4-215ENST00000457039 C5orf52A6NGY3 159 aa8.87□□□□□ -0.99
SMPD4-215ENST00000457039 LEPROTO15243 131 aa8.87□□□□□ -0.99
SMPD4-215ENST00000457039 FAM168BA1KXE4 195 aa8.86□□□□□ -0.99
SMPD4-215ENST00000457039 FAM229AH3BQW9 127 aa8.86□□□□□ -0.99
SMPD4-215ENST00000457039 S100A2P29034 98 aa8.86□□□□□ -0.99
SMPD4-215ENST00000457039 KRTAP10-4P60372 401 aaPredicted RBP8.86□□□□□ -0.99
SMPD4-215ENST00000457039 HERVK_113P61574 105 aa8.86□□□□□ -0.99
SMPD4-215ENST00000457039 KRTAP7-1Q8IUC3 87 aa8.86□□□□□ -0.99
SMPD4-215ENST00000457039 PLEKHB2Q96CS7 222 aa8.86□□□□□ -0.99
SMPD4-215ENST00000457039 ERG28Q9UKR5 140 aa8.86□□□□□ -0.99
SMPD4-215ENST00000457039 E9PLD3 99 aa8.85□□□□□ -0.99
SMPD4-215ENST00000457039 J3QQQ9 107 aa8.84□□□□□ -0.99
SMPD4-215ENST00000457039 COX17Q14061 63 aa8.84□□□□□ -0.99
SMPD4-215ENST00000457039 XAGE1AQ9HD64 81 aa8.84□□□□□ -0.99
SMPD4-215ENST00000457039 NDUFA12Q9UI09 145 aa8.84□□□□□ -0.99
SMPD4-215ENST00000457039 SRRM2Q9UQ35 2752 aaKnown RBP8.84□□□□□ -1
SMPD4-215ENST00000457039 C20orf202A1L168 122 aa8.83□□□□□ -1
SMPD4-215ENST00000457039 PFN2P35080 140 aa8.83□□□□□ -1
SMPD4-215ENST00000457039 PKHD1L1Q86WI1 4243 aa8.82□□□□□ -1
SMPD4-215ENST00000457039 MYMXA0A1B0GTQ4 84 aa8.82□□□□□ -1
SMPD4-215ENST00000457039 PLA2G1BP04054 148 aaKnown RBP8.82□□□□□ -1
SMPD4-215ENST00000457039 HERV-K104P63124 156 aa8.82□□□□□ -1
SMPD4-215ENST00000457039 FAM19A5Q7Z5A7 132 aaPredicted RBP8.82□□□□□ -1
SMPD4-215ENST00000457039 NMUP48645 174 aa8.81□□□□□ -1
SMPD4-215ENST00000457039 RPL37AP61513 92 aaKnown RBP8.81□□□□□ -1
SMPD4-215ENST00000457039 SERTAD4-AS1Q5TG53 156 aa8.81□□□□□ -1
SMPD4-215ENST00000457039 PHF5AQ7RTV0 110 aaKnown RBP8.81□□□□□ -1
SMPD4-215ENST00000457039 C7orf33Q8WU49 177 aa8.81□□□□□ -1
SMPD4-215ENST00000457039 LGALS3P17931 250 aaKnown RBP8.8□□□□□ -1
SMPD4-215ENST00000457039 AKR1D1P51857 326 aa8.8□□□□□ -1
SMPD4-215ENST00000457039 SND1-IT1Q9HBX3 110 aa8.8□□□□□ -1
SMPD4-215ENST00000457039 PLA2G2DQ9UNK4 145 aa8.8□□□□□ -1
SMPD4-215ENST00000457039 IGKV2D-26A0A0A0MRZ7 120 aa8.79□□□□□ -1
SMPD4-215ENST00000457039 SMIM13P0DJ93 91 aa8.79□□□□□ -1
SMPD4-215ENST00000457039 M0QXV9 152 aa8.78□□□□□ -1
SMPD4-215ENST00000457039 LINC00158P58513 81 aa8.78□□□□□ -1
SMPD4-215ENST00000457039 ATOH7Q8N100 152 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms