RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 NDUFA1O15239 70 aa6.81□□□□□ -1.32
LINC01940-201ENST00000455228 ZNF73O43830 326 aaPredicted RBP6.81□□□□□ -1.32
LINC01940-201ENST00000455228 DEFB112Q30KQ8 113 aa6.81□□□□□ -1.32
LINC01940-201ENST00000455228 C11orf68Q9H3H3 251 aaKnown RBP6.81□□□□□ -1.32
LINC01940-201ENST00000455228 CCDC168Q8NDH2 2452 aa6.81□□□□□ -1.32
LINC01940-201ENST00000455228 GNLYP22749 145 aa6.8□□□□□ -1.32
LINC01940-201ENST00000455228 LINC00308Q8TCZ7 52 aa6.8□□□□□ -1.32
LINC01940-201ENST00000455228 TRAV23DV6A0A075B6W5 121 aa6.8□□□□□ -1.32
LINC01940-201ENST00000455228 DIRC1Q969H9 104 aa6.8□□□□□ -1.32
LINC01940-201ENST00000455228 C9orf129Q5T035 196 aaKnown RBP6.79□□□□□ -1.32
LINC01940-201ENST00000455228 ATP11AUNQ6ZP68 121 aa6.79□□□□□ -1.32
LINC01940-201ENST00000455228 IGHV3OR16-12A0A075B7B8 117 aa6.79□□□□□ -1.32
LINC01940-201ENST00000455228 MYO9AB2RTY4 2548 aa6.78□□□□□ -1.32
LINC01940-201ENST00000455228 LCE6AA0A183 80 aa6.78□□□□□ -1.32
LINC01940-201ENST00000455228 IGHV3-53P01767 116 aa6.78□□□□□ -1.32
LINC01940-201ENST00000455228 DEFB136Q30KP8 78 aa6.78□□□□□ -1.32
LINC01940-201ENST00000455228 COX6A2Q02221 97 aa6.78□□□□□ -1.32
LINC01940-201ENST00000455228 SYCNQ0VAF6 134 aa6.78□□□□□ -1.32
LINC01940-201ENST00000455228 HECTD1Q9ULT8 2610 aa6.78□□□□□ -1.32
LINC01940-201ENST00000455228 USP24Q9UPU5 2620 aa6.78□□□□□ -1.32
LINC01940-201ENST00000455228 SLURP1P55000 103 aa6.78□□□□□ -1.32
LINC01940-201ENST00000455228 MPLKIPQ8TAP9 179 aa6.78□□□□□ -1.32
LINC01940-201ENST00000455228 CXCL6P80162 114 aa6.77□□□□□ -1.33
LINC01940-201ENST00000455228 LCA10Q71F78 164 aa6.77□□□□□ -1.33
LINC01940-201ENST00000455228 CRYBG3Q68DQ2 2970 aa6.77□□□□□ -1.33
LINC01940-201ENST00000455228 PIK3CD-AS1Q5SR53 167 aa6.77□□□□□ -1.33
LINC01940-201ENST00000455228 INSP01308 110 aa6.76□□□□□ -1.33
LINC01940-201ENST00000455228 LINC00242Q5T6M2 205 aa6.76□□□□□ -1.33
LINC01940-201ENST00000455228 USP9XQ93008 2570 aaPredicted RBP6.76□□□□□ -1.33
LINC01940-201ENST00000455228 IGLV5-45A0A087WSX0 123 aa6.75□□□□□ -1.33
LINC01940-201ENST00000455228 TRGV1A0A0A0MS02 117 aa6.75□□□□□ -1.33
LINC01940-201ENST00000455228 NAV2Q8IVL1 2488 aa6.75□□□□□ -1.33
LINC01940-201ENST00000455228 TMEM256-PLSCR3K7ERE1 68 aa6.75□□□□□ -1.33
LINC01940-201ENST00000455228 SOSTDC1Q6X4U4 206 aa6.75□□□□□ -1.33
LINC01940-201ENST00000455228 WNK1Q9H4A3 2382 aa6.75□□□□□ -1.33
LINC01940-201ENST00000455228 LOC100131303A0A0U1RQF7 123 aa6.75□□□□□ -1.33
LINC01940-201ENST00000455228 RPL36AP83881 106 aaKnown RBP6.75□□□□□ -1.33
LINC01940-201ENST00000455228 C7orf65Q6ZTY9 151 aa6.75□□□□□ -1.33
LINC01940-201ENST00000455228 RPL36ALQ969Q0 106 aaKnown RBP6.75□□□□□ -1.33
LINC01940-201ENST00000455228 VPS13CQ709C8 3753 aa6.74□□□□□ -1.33
LINC01940-201ENST00000455228 MAPK1IP1LQ8NDC0 245 aa6.74□□□□□ -1.33
LINC01940-201ENST00000455228 C14orf132Q9NPU4 83 aa6.74□□□□□ -1.33
LINC01940-201ENST00000455228 IGLV5-39A0A0G2JS06 123 aa6.74□□□□□ -1.33
LINC01940-201ENST00000455228 SMIM1B2RUZ4 78 aa6.74□□□□□ -1.33
LINC01940-201ENST00000455228 UBE2L6O14933 153 aa6.74□□□□□ -1.33
LINC01940-201ENST00000455228 C18orf65Q6ZTR6 163 aa6.74□□□□□ -1.33
LINC01940-201ENST00000455228 LINC01356Q8N9X3 169 aa6.74□□□□□ -1.33
LINC01940-201ENST00000455228 C11orf72Q8NBR9 251 aa6.74□□□□□ -1.33
LINC01940-201ENST00000455228 SNURFQ9Y675 71 aa6.74□□□□□ -1.33
LINC01940-201ENST00000455228 HELZ2Q9BYK8 2649 aaKnown RBP6.73□□□□□ -1.33
LINC01940-201ENST00000455228 POLQO75417 2590 aa6.73□□□□□ -1.33
LINC01940-201ENST00000455228 TRAV22A0A0B4J277 110 aa6.73□□□□□ -1.33
LINC01940-201ENST00000455228 A8MUN3 132 aa6.73□□□□□ -1.33
LINC01940-201ENST00000455228 KIAA0087Q14695 138 aa6.73□□□□□ -1.33
LINC01940-201ENST00000455228 ENHOQ6UWT2 76 aa6.73□□□□□ -1.33
LINC01940-201ENST00000455228 TMEM254Q8TBM7 123 aa6.73□□□□□ -1.33
LINC01940-201ENST00000455228 CYP4F30PQ9H0H9 118 aa6.73□□□□□ -1.33
LINC01940-201ENST00000455228 MAP6D1Q9H9H5 199 aa6.73□□□□□ -1.33
LINC01940-201ENST00000455228 CRPP02741 224 aa6.73□□□□□ -1.33
LINC01940-201ENST00000455228 Q9HAA7 133 aa6.73□□□□□ -1.33
LINC01940-201ENST00000455228 TOMM7Q9P0U1 55 aa6.73□□□□□ -1.33
LINC01940-201ENST00000455228 A0A087X002 238 aa6.73□□□□□ -1.33
LINC01940-201ENST00000455228 IGKV3OR2-268A0A0C4DH90 116 aa6.73□□□□□ -1.33
LINC01940-201ENST00000455228 PRB1P04280 392 aa6.73□□□□□ -1.33
LINC01940-201ENST00000455228 CELSR2Q9HCU4 2923 aa6.72□□□□□ -1.33
LINC01940-201ENST00000455228 TRAV10A0A0B4J240 114 aa6.72□□□□□ -1.33
LINC01940-201ENST00000455228 SERTAD4-AS1Q5TG53 156 aa6.72□□□□□ -1.33
LINC01940-201ENST00000455228 JMJD7-PLA2G4BH0Y9G9 81 aa6.71□□□□□ -1.33
LINC01940-201ENST00000455228 Q5VV11 94 aa6.71□□□□□ -1.33
LINC01940-201ENST00000455228 C16orf90A8MZG2 172 aa6.71□□□□□ -1.34
LINC01940-201ENST00000455228 H0YGX0 51 aa6.71□□□□□ -1.34
LINC01940-201ENST00000455228 ZNF702PQ9H963 129 aa6.71□□□□□ -1.34
LINC01940-201ENST00000455228 ABCA12Q86UK0 2595 aa6.7□□□□□ -1.34
LINC01940-201ENST00000455228 A8MTW9 85 aa6.7□□□□□ -1.34
LINC01940-201ENST00000455228 K7EQD1 137 aa6.7□□□□□ -1.34
LINC01940-201ENST00000455228 PRYO14603 147 aa6.7□□□□□ -1.34
LINC01940-201ENST00000455228 LINC00158P58513 81 aa6.7□□□□□ -1.34
LINC01940-201ENST00000455228 DSCR9P59020 149 aa6.7□□□□□ -1.34
LINC01940-201ENST00000455228 FAM19A3Q7Z5A8 133 aa6.7□□□□□ -1.34
LINC01940-201ENST00000455228 ESM1Q9NQ30 184 aa6.7□□□□□ -1.34
LINC01940-201ENST00000455228 A0A087WZ39 114 aa6.7□□□□□ -1.34
LINC01940-201ENST00000455228 IGSF10Q6WRI0 2623 aa6.7□□□□□ -1.34
LINC01940-201ENST00000455228 MIR7-3HGQ8N6C7 128 aa6.7□□□□□ -1.34
LINC01940-201ENST00000455228 SND1-IT1Q9HBX3 110 aa6.7□□□□□ -1.34
LINC01940-201ENST00000455228 CDC42SE2Q9NRR3 84 aa6.7□□□□□ -1.34
LINC01940-201ENST00000455228 ANKRD17O75179 2603 aaKnown RBP6.69□□□□□ -1.34
LINC01940-201ENST00000455228 LOC110117498A0A087WWA1 95 aa6.69□□□□□ -1.34
LINC01940-201ENST00000455228 ZANQ9Y493 2812 aa6.69□□□□□ -1.34
LINC01940-201ENST00000455228 TRBV10-1A0A0K0K1A3 114 aa6.69□□□□□ -1.34
LINC01940-201ENST00000455228 FUSP35637 526 aaKnown RBP eCLIP6.69□□□□□ -1.34
LINC01940-201ENST00000455228 Q6ZTI0 123 aa6.69□□□□□ -1.34
LINC01940-201ENST00000455228 NTM-AS1Q6ZSK4 140 aa6.69□□□□□ -1.34
LINC01940-201ENST00000455228 TLN2Q9Y4G6 2542 aa6.68□□□□□ -1.34
LINC01940-201ENST00000455228 DOPEY1Q5JWR5 2465 aa6.68□□□□□ -1.34
LINC01940-201ENST00000455228 UBE2AP49459 152 aa6.68□□□□□ -1.34
LINC01940-201ENST00000455228 DEFB114Q30KQ6 69 aa6.68□□□□□ -1.34
LINC01940-201ENST00000455228 Q6YL49 198 aa6.68□□□□□ -1.34
LINC01940-201ENST00000455228 COX7B2Q8TF08 81 aa6.68□□□□□ -1.34
LINC01940-201ENST00000455228 OCR1Q9BZK8 76 aa6.68□□□□□ -1.34
LINC01940-201ENST00000455228 TRGV2A0A075B6R0 118 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms