RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 PANO1I0J062 215 aa14□□□□□ -0.17
APOE-204ENST00000446996 TLX1NBP0CAT3 122 aa14□□□□□ -0.17
APOE-204ENST00000446996 CXCL5P42830 114 aa14□□□□□ -0.17
APOE-204ENST00000446996 HAMPP81172 84 aa14□□□□□ -0.17
APOE-204ENST00000446996 UNQ6190/PRO20217Q6UXQ8 127 aa14□□□□□ -0.17
APOE-204ENST00000446996 ZNF22P17026 224 aaPredicted RBP13.99□□□□□ -0.17
APOE-204ENST00000446996 COA6Q5JTJ3 125 aaKnown RBP13.99□□□□□ -0.17
APOE-204ENST00000446996 C10orf25Q5T742 122 aa13.99□□□□□ -0.17
APOE-204ENST00000446996 TOMM7Q9P0U1 55 aa13.99□□□□□ -0.17
APOE-204ENST00000446996 A0A096LNI7 61 aa13.98□□□□□ -0.17
APOE-204ENST00000446996 F8VRH5 84 aa13.98□□□□□ -0.17
APOE-204ENST00000446996 CKS1BP61024 79 aa13.98□□□□□ -0.17
APOE-204ENST00000446996 C6orf48Q9UBA6 75 aa13.98□□□□□ -0.17
APOE-204ENST00000446996 C11orf86A6NJI1 115 aa13.97□□□□□ -0.17
APOE-204ENST00000446996 SMR3BP02814 79 aaPredicted RBP13.97□□□□□ -0.17
APOE-204ENST00000446996 CHTF8P0CG12 524 aa13.97□□□□□ -0.17
APOE-204ENST00000446996 PTTG1IPP53801 180 aa13.97□□□□□ -0.17
APOE-204ENST00000446996 COX7B2Q8TF08 81 aa13.97□□□□□ -0.17
APOE-204ENST00000446996 DPH3Q96FX2 82 aa13.97□□□□□ -0.17
APOE-204ENST00000446996 A0A087WYN8 130 aa13.96□□□□□ -0.17
APOE-204ENST00000446996 IGLV5-39A0A0G2JS06 123 aa13.96□□□□□ -0.17
APOE-204ENST00000446996 FAM229AH3BQW9 127 aa13.96□□□□□ -0.17
APOE-204ENST00000446996 SPINK8P0C7L1 97 aa13.96□□□□□ -0.17
APOE-204ENST00000446996 C2orf82Q6UX34 121 aa13.96□□□□□ -0.17
APOE-204ENST00000446996 PLAC8Q9NZF1 115 aa13.96□□□□□ -0.17
APOE-204ENST00000446996 IGKV2-24A0A0C4DH68 120 aa13.95□□□□□ -0.18
APOE-204ENST00000446996 EPM2AB3EWF7 344 aa13.95□□□□□ -0.18
APOE-204ENST00000446996 MAJINQ3KP22 176 aa13.95□□□□□ -0.18
APOE-204ENST00000446996 FABP4P15090 132 aa13.94□□□□□ -0.18
APOE-204ENST00000446996 FAT1Q14517 4588 aa13.94□□□□□ -0.18
APOE-204ENST00000446996 GAGE2BQ13066 116 aa13.93□□□□□ -0.18
APOE-204ENST00000446996 ODF1Q14990 250 aa13.93□□□□□ -0.18
APOE-204ENST00000446996 TMEM170BQ5T4T1 132 aa13.93□□□□□ -0.18
APOE-204ENST00000446996 Q5VSD8 79 aa13.92□□□□□ -0.18
APOE-204ENST00000446996 LINC00528Q8N1L1 170 aa13.92□□□□□ -0.18
APOE-204ENST00000446996 RPL18AQ02543 176 aaKnown RBP13.91□□□□□ -0.18
APOE-204ENST00000446996 STPG4Q8N801 248 aa13.91□□□□□ -0.18
APOE-204ENST00000446996 MAP1LC3CQ9BXW4 147 aa13.91□□□□□ -0.18
APOE-204ENST00000446996 NDUFC2-KCTD14E9PQ53 114 aa13.9□□□□□ -0.18
APOE-204ENST00000446996 TMEM223A0PJW6 202 aa13.89□□□□□ -0.19
APOE-204ENST00000446996 Q6ZRP5 223 aa13.89□□□□□ -0.19
APOE-204ENST00000446996 PLA2G1BP04054 148 aaKnown RBP13.88□□□□□ -0.19
APOE-204ENST00000446996 SFTA2Q6UW10 78 aa13.88□□□□□ -0.19
APOE-204ENST00000446996 PLNP26678 52 aa13.87□□□□□ -0.19
APOE-204ENST00000446996 H0Y8G0 127 aa13.86□□□□□ -0.19
APOE-204ENST00000446996 C9orf116Q5BN46 136 aaPredicted RBP13.85□□□□□ -0.19
APOE-204ENST00000446996 VPS13BQ7Z7G8 4022 aa13.85□□□□□ -0.19
APOE-204ENST00000446996 DPM2O94777 84 aa13.84□□□□□ -0.19
APOE-204ENST00000446996 SYS1-DBNDD2H3BUS1 97 aa13.83□□□□□ -0.2
APOE-204ENST00000446996 IGKCP01834 107 aa13.82□□□□□ -0.2
APOE-204ENST00000446996 GAGE2EQ4V326 116 aa13.82□□□□□ -0.2
APOE-204ENST00000446996 C7orf33Q8WU49 177 aa13.82□□□□□ -0.2
APOE-204ENST00000446996 GAGE2DQ9UEU5 116 aa13.82□□□□□ -0.2
APOE-204ENST00000446996 A0A1W2PNN7 141 aa13.81□□□□□ -0.2
APOE-204ENST00000446996 PET117Q6UWS5 81 aa13.81□□□□□ -0.2
APOE-204ENST00000446996 ZNF625Q96I27 306 aaPredicted RBP13.79□□□□□ -0.2
APOE-204ENST00000446996 KRTAP10-4P60372 401 aaPredicted RBP13.78□□□□□ -0.2
APOE-204ENST00000446996 RPL37AP61513 92 aaKnown RBP13.78□□□□□ -0.2
APOE-204ENST00000446996 COX17Q14061 63 aa13.78□□□□□ -0.2
APOE-204ENST00000446996 LINC01545Q5VT33 79 aa13.78□□□□□ -0.2
APOE-204ENST00000446996 HERVK_113P61574 105 aa13.77□□□□□ -0.21
APOE-204ENST00000446996 C9orf129Q5T035 196 aaKnown RBP13.77□□□□□ -0.21
APOE-204ENST00000446996 C3orf79P0CE67 100 aa13.76□□□□□ -0.21
APOE-204ENST00000446996 PMCHL2Q9BQD1 86 aa13.76□□□□□ -0.21
APOE-204ENST00000446996 LEPROTO15243 131 aa13.75□□□□□ -0.21
APOE-204ENST00000446996 PLEKHB2Q96CS7 222 aa13.75□□□□□ -0.21
APOE-204ENST00000446996 INAFM2P0DMQ5 153 aa13.74□□□□□ -0.21
APOE-204ENST00000446996 ERG28Q9UKR5 140 aa13.74□□□□□ -0.21
APOE-204ENST00000446996 S100A6P06703 90 aa13.73□□□□□ -0.21
APOE-204ENST00000446996 HERV-K104P63124 156 aa13.73□□□□□ -0.21
APOE-204ENST00000446996 FAM168BA1KXE4 195 aa13.71□□□□□ -0.21
APOE-204ENST00000446996 LINC00587B1AMM8 73 aa13.71□□□□□ -0.21
APOE-204ENST00000446996 HIST3H2BBQ8N257 126 aa13.71□□□□□ -0.21
APOE-204ENST00000446996 XAGE1AQ9HD64 81 aa13.71□□□□□ -0.21
APOE-204ENST00000446996 PLA2G2DQ9UNK4 145 aa13.71□□□□□ -0.21
APOE-204ENST00000446996 SRRM2Q9UQ35 2752 aaKnown RBP13.71□□□□□ -0.22
APOE-204ENST00000446996 MYMXA0A1B0GTQ4 84 aa13.7□□□□□ -0.22
APOE-204ENST00000446996 PFN2P35080 140 aa13.7□□□□□ -0.22
APOE-204ENST00000446996 AKR1D1P51857 326 aa13.7□□□□□ -0.22
APOE-204ENST00000446996 KRTDAPP60985 99 aa13.7□□□□□ -0.22
APOE-204ENST00000446996 KRTAP7-1Q8IUC3 87 aa13.7□□□□□ -0.22
APOE-204ENST00000446996 NDUFA12Q9UI09 145 aa13.7□□□□□ -0.22
APOE-204ENST00000446996 NMUP48645 174 aa13.69□□□□□ -0.22
APOE-204ENST00000446996 FAM19A5Q7Z5A7 132 aaPredicted RBP13.69□□□□□ -0.22
APOE-204ENST00000446996 C20orf202A1L168 122 aa13.68□□□□□ -0.22
APOE-204ENST00000446996 E9PLD3 99 aa13.68□□□□□ -0.22
APOE-204ENST00000446996 J3QQQ9 107 aa13.68□□□□□ -0.22
APOE-204ENST00000446996 S100A2P29034 98 aa13.68□□□□□ -0.22
APOE-204ENST00000446996 PHF5AQ7RTV0 110 aaKnown RBP13.68□□□□□ -0.22
APOE-204ENST00000446996 TP73-AS1Q9UF72 201 aa13.67□□□□□ -0.22
APOE-204ENST00000446996 HERC1Q15751 4861 aa13.66□□□□□ -0.22
APOE-204ENST00000446996 M0QXV9 152 aa13.66□□□□□ -0.22
APOE-204ENST00000446996 LGALS3P17931 250 aaKnown RBP13.65□□□□□ -0.22
APOE-204ENST00000446996 TSPEAR-AS2P59090 65 aa13.65□□□□□ -0.22
APOE-204ENST00000446996 PRR3P79522 188 aaKnown RBP13.65□□□□□ -0.22
APOE-204ENST00000446996 HIST1H2BLQ99880 126 aa13.65□□□□□ -0.22
APOE-204ENST00000446996 IGLV5-37A0A075B6J1 123 aa13.64□□□□□ -0.23
APOE-204ENST00000446996 LINC00158P58513 81 aa13.64□□□□□ -0.23
APOE-204ENST00000446996 LBHQ53QV2 105 aaPredicted RBP13.64□□□□□ -0.23
APOE-204ENST00000446996 SERTAD4-AS1Q5TG53 156 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms