RNA–Protein interactions for RNA: ENST00000445998.1

UBQLN3-202, Transcript of ubiquilin 3, humanhuman

TSL 3

Gene UBQLN3, Length 817 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3-202ENST00000445998 AKR1D1P51857 326 aa8.84□□□□□ -0.99
UBQLN3-202ENST00000445998 TMEM223A0PJW6 202 aa8.83□□□□□ -1
UBQLN3-202ENST00000445998 TLX1NBP0CAT3 122 aa8.83□□□□□ -1
UBQLN3-202ENST00000445998 C2orf82Q6UX34 121 aa8.83□□□□□ -1
UBQLN3-202ENST00000445998 FAM30AQ9NZY2 134 aa8.83□□□□□ -1
UBQLN3-202ENST00000445998 C20orf202A1L168 122 aa8.82□□□□□ -1
UBQLN3-202ENST00000445998 C3orf79P0CE67 100 aa8.82□□□□□ -1
UBQLN3-202ENST00000445998 XGP55808 180 aa8.82□□□□□ -1
UBQLN3-202ENST00000445998 HERVK_113P61574 105 aa8.82□□□□□ -1
UBQLN3-202ENST00000445998 CIRBPQ14011 172 aaKnown RBP8.82□□□□□ -1
UBQLN3-202ENST00000445998 C10orf25Q5T742 122 aa8.82□□□□□ -1
UBQLN3-202ENST00000445998 HIST3H2BBQ8N257 126 aa8.82□□□□□ -1
UBQLN3-202ENST00000445998 C6orf48Q9UBA6 75 aa8.82□□□□□ -1
UBQLN3-202ENST00000445998 KRTDAPP60985 99 aa8.81□□□□□ -1
UBQLN3-202ENST00000445998 LINC01545Q5VT33 79 aa8.81□□□□□ -1
UBQLN3-202ENST00000445998 PTTG1IPP53801 180 aa8.8□□□□□ -1
UBQLN3-202ENST00000445998 RPL18AQ02543 176 aaKnown RBP8.8□□□□□ -1
UBQLN3-202ENST00000445998 A0A096LNI7 61 aa8.79□□□□□ -1
UBQLN3-202ENST00000445998 IGKV2-24A0A0C4DH68 120 aa8.79□□□□□ -1
UBQLN3-202ENST00000445998 NDUFC2-KCTD14E9PQ53 114 aa8.79□□□□□ -1
UBQLN3-202ENST00000445998 SNRPEP62304 92 aaKnown RBP8.79□□□□□ -1
UBQLN3-202ENST00000445998 GAGE2BQ13066 116 aa8.79□□□□□ -1
UBQLN3-202ENST00000445998 MAJINQ3KP22 176 aa8.79□□□□□ -1
UBQLN3-202ENST00000445998 SPACA4Q8TDM5 124 aa8.79□□□□□ -1
UBQLN3-202ENST00000445998 PLEKHB2Q96CS7 222 aa8.79□□□□□ -1
UBQLN3-202ENST00000445998 PMCHL2Q9BQD1 86 aa8.79□□□□□ -1
UBQLN3-202ENST00000445998 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.79□□□□□ -1
UBQLN3-202ENST00000445998 PKHD1P08F94 4074 aa8.79□□□□□ -1
UBQLN3-202ENST00000445998 C5orf52A6NGY3 159 aa8.78□□□□□ -1
UBQLN3-202ENST00000445998 SCXQ7RTU7 201 aa8.78□□□□□ -1
UBQLN3-202ENST00000445998 CIRBP-AS1Q8TBR5 109 aa8.78□□□□□ -1
UBQLN3-202ENST00000445998 HIST1H2BLQ99880 126 aa8.78□□□□□ -1
UBQLN3-202ENST00000445998 DNAH11Q96DT5 4516 aa8.77□□□□□ -1.01
UBQLN3-202ENST00000445998 LINC00587B1AMM8 73 aa8.77□□□□□ -1.01
UBQLN3-202ENST00000445998 LEPROTO15243 131 aa8.77□□□□□ -1.01
UBQLN3-202ENST00000445998 HERV-K104P63124 156 aa8.77□□□□□ -1.01
UBQLN3-202ENST00000445998 COX17Q14061 63 aa8.77□□□□□ -1.01
UBQLN3-202ENST00000445998 EPPK1P58107 5090 aaKnown RBP8.77□□□□□ -1.01
UBQLN3-202ENST00000445998 A0A087WYN8 130 aa8.76□□□□□ -1.01
UBQLN3-202ENST00000445998 CHTF8P0CG12 524 aa8.76□□□□□ -1.01
UBQLN3-202ENST00000445998 Q6ZRP5 223 aa8.76□□□□□ -1.01
UBQLN3-202ENST00000445998 STPG4Q8N801 248 aa8.76□□□□□ -1.01
UBQLN3-202ENST00000445998 PLAC8Q9NZF1 115 aa8.76□□□□□ -1.01
UBQLN3-202ENST00000445998 MYMXA0A1B0GTQ4 84 aa8.75□□□□□ -1.01
UBQLN3-202ENST00000445998 GAGE2EQ4V326 116 aa8.75□□□□□ -1.01
UBQLN3-202ENST00000445998 C9orf116Q5BN46 136 aaPredicted RBP8.75□□□□□ -1.01
UBQLN3-202ENST00000445998 GAGE2DQ9UEU5 116 aa8.75□□□□□ -1.01
UBQLN3-202ENST00000445998 FAM229AH3BQW9 127 aa8.74□□□□□ -1.01
UBQLN3-202ENST00000445998 PANO1I0J062 215 aa8.74□□□□□ -1.01
UBQLN3-202ENST00000445998 LGALS3P17931 250 aaKnown RBP8.74□□□□□ -1.01
UBQLN3-202ENST00000445998 NMUP48645 174 aa8.74□□□□□ -1.01
UBQLN3-202ENST00000445998 ZNF625Q96I27 306 aaPredicted RBP8.74□□□□□ -1.01
UBQLN3-202ENST00000445998 E9PLD3 99 aa8.73□□□□□ -1.01
UBQLN3-202ENST00000445998 J3QQQ9 107 aa8.73□□□□□ -1.01
UBQLN3-202ENST00000445998 Q8N1X5 172 aa8.73□□□□□ -1.01
UBQLN3-202ENST00000445998 NDUFA12Q9UI09 145 aa8.73□□□□□ -1.01
UBQLN3-202ENST00000445998 ERG28Q9UKR5 140 aa8.73□□□□□ -1.01
UBQLN3-202ENST00000445998 HAMPP81172 84 aa8.72□□□□□ -1.01
UBQLN3-202ENST00000445998 SMR3BP02814 79 aaPredicted RBP8.71□□□□□ -1.02
UBQLN3-202ENST00000445998 PFN2P35080 140 aa8.71□□□□□ -1.02
UBQLN3-202ENST00000445998 C7orf33Q8WU49 177 aa8.71□□□□□ -1.02
UBQLN3-202ENST00000445998 EPM2AB3EWF7 344 aa8.7□□□□□ -1.02
UBQLN3-202ENST00000445998 MEIG1Q5JSS6 88 aa8.7□□□□□ -1.02
UBQLN3-202ENST00000445998 PLA2G1BP04054 148 aaKnown RBP8.69□□□□□ -1.02
UBQLN3-202ENST00000445998 LINC00158P58513 81 aa8.69□□□□□ -1.02
UBQLN3-202ENST00000445998 A0A1W2PNN7 141 aa8.68□□□□□ -1.02
UBQLN3-202ENST00000445998 HSBP1L1C9JCN9 74 aa8.68□□□□□ -1.02
UBQLN3-202ENST00000445998 LINC00528Q8N1L1 170 aa8.68□□□□□ -1.02
UBQLN3-202ENST00000445998 SCGB1D1O95968 90 aa8.67□□□□□ -1.02
UBQLN3-202ENST00000445998 C9orf129Q5T035 196 aaKnown RBP8.67□□□□□ -1.02
UBQLN3-202ENST00000445998 DNAH5Q8TE73 4624 aa8.67□□□□□ -1.02
UBQLN3-202ENST00000445998 XAGE1AQ9HD64 81 aa8.67□□□□□ -1.02
UBQLN3-202ENST00000445998 PLA2G2DQ9UNK4 145 aa8.67□□□□□ -1.02
UBQLN3-202ENST00000445998 DYNC1H1Q14204 4646 aaKnown RBP8.66□□□□□ -1.02
UBQLN3-202ENST00000445998 TSPEAR-AS2P59090 65 aa8.66□□□□□ -1.02
UBQLN3-202ENST00000445998 ATOH7Q8N100 152 aa8.66□□□□□ -1.02
UBQLN3-202ENST00000445998 SMIM13P0DJ93 91 aa8.65□□□□□ -1.02
UBQLN3-202ENST00000445998 Q5VSD8 79 aa8.65□□□□□ -1.02
UBQLN3-202ENST00000445998 SND1-IT1Q9HBX3 110 aa8.65□□□□□ -1.02
UBQLN3-202ENST00000445998 TMA7Q9Y2S6 64 aaKnown RBP8.65□□□□□ -1.02
UBQLN3-202ENST00000445998 BIRC6Q9NR09 4857 aa8.65□□□□□ -1.02
UBQLN3-202ENST00000445998 LRP1BQ9NZR2 4599 aa8.64□□□□□ -1.03
UBQLN3-202ENST00000445998 RPL24P83731 157 aaKnown RBP8.64□□□□□ -1.03
UBQLN3-202ENST00000445998 LBHQ53QV2 105 aaPredicted RBP8.64□□□□□ -1.03
UBQLN3-202ENST00000445998 FAM19A5Q7Z5A7 132 aaPredicted RBP8.64□□□□□ -1.03
UBQLN3-202ENST00000445998 A0A0U1RRA0 63 aa8.63□□□□□ -1.03
UBQLN3-202ENST00000445998 FAM168BA1KXE4 195 aa8.63□□□□□ -1.03
UBQLN3-202ENST00000445998 ZNF815PA8K554 130 aa8.63□□□□□ -1.03
UBQLN3-202ENST00000445998 RPL37AP61513 92 aaKnown RBP8.63□□□□□ -1.03
UBQLN3-202ENST00000445998 TP73-AS1Q9UF72 201 aa8.63□□□□□ -1.03
UBQLN3-202ENST00000445998 IGKV2D-26A0A0A0MRZ7 120 aa8.62□□□□□ -1.03
UBQLN3-202ENST00000445998 M0QXV9 152 aa8.62□□□□□ -1.03
UBQLN3-202ENST00000445998 MIR7-3HGQ8N6C7 128 aa8.62□□□□□ -1.03
UBQLN3-202ENST00000445998 NKAPP1Q8N9T2 125 aa8.62□□□□□ -1.03
UBQLN3-202ENST00000445998 IGLV5-37A0A075B6J1 123 aa8.61□□□□□ -1.03
UBQLN3-202ENST00000445998 A0A0J9YXY3 114 aa8.61□□□□□ -1.03
UBQLN3-202ENST00000445998 TIMM17BO60830 172 aa8.61□□□□□ -1.03
UBQLN3-202ENST00000445998 ANKRD39Q53RE8 183 aa8.61□□□□□ -1.03
UBQLN3-202ENST00000445998 PHF5AQ7RTV0 110 aaKnown RBP8.61□□□□□ -1.03
UBQLN3-202ENST00000445998 C22orf24Q9Y442 160 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms