RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 C6orf48Q9UBA6 75 aa9.52□□□□□ -0.89
CSNK1E-210ENST00000442216 LINC00310P59036 64 aa9.51□□□□□ -0.89
CSNK1E-210ENST00000442216 CKS1BP61024 79 aa9.51□□□□□ -0.89
CSNK1E-210ENST00000442216 GAGE2BQ13066 116 aa9.51□□□□□ -0.89
CSNK1E-210ENST00000442216 C2orf82Q6UX34 121 aa9.51□□□□□ -0.89
CSNK1E-210ENST00000442216 STPG4Q8N801 248 aa9.51□□□□□ -0.89
CSNK1E-210ENST00000442216 S100A1P23297 94 aa9.5□□□□□ -0.89
CSNK1E-210ENST00000442216 RPL18AQ02543 176 aaKnown RBP9.5□□□□□ -0.89
CSNK1E-210ENST00000442216 FAM19A2Q8N3H0 131 aa9.5□□□□□ -0.89
CSNK1E-210ENST00000442216 COX7B2Q8TF08 81 aa9.49□□□□□ -0.89
CSNK1E-210ENST00000442216 CHTOPQ9Y3Y2 248 aaKnown RBP9.49□□□□□ -0.89
CSNK1E-210ENST00000442216 F8VRH5 84 aa9.48□□□□□ -0.89
CSNK1E-210ENST00000442216 LEPROTL1O95214 131 aa9.48□□□□□ -0.89
CSNK1E-210ENST00000442216 SPINK8P0C7L1 97 aa9.48□□□□□ -0.89
CSNK1E-210ENST00000442216 INAFM2P0DMQ5 153 aa9.48□□□□□ -0.89
CSNK1E-210ENST00000442216 ZNF22P17026 224 aaPredicted RBP9.48□□□□□ -0.89
CSNK1E-210ENST00000442216 IGLV5-39A0A0G2JS06 123 aa9.47□□□□□ -0.89
CSNK1E-210ENST00000442216 NDUFC2-KCTD14E9PQ53 114 aa9.47□□□□□ -0.89
CSNK1E-210ENST00000442216 HIST1H2BKO60814 126 aa9.47□□□□□ -0.89
CSNK1E-210ENST00000442216 HIST1H2BJP06899 126 aa9.47□□□□□ -0.89
CSNK1E-210ENST00000442216 HIST1H2BOP23527 126 aa9.47□□□□□ -0.89
CSNK1E-210ENST00000442216 HIST1H2BBP33778 126 aa9.47□□□□□ -0.89
CSNK1E-210ENST00000442216 HIST1H2BDP58876 126 aa9.47□□□□□ -0.89
CSNK1E-210ENST00000442216 KRTAP10-4P60372 401 aaPredicted RBP9.47□□□□□ -0.89
CSNK1E-210ENST00000442216 RPL37AP61513 92 aaKnown RBP9.47□□□□□ -0.89
CSNK1E-210ENST00000442216 HIST1H2BCP62807 126 aa9.47□□□□□ -0.89
CSNK1E-210ENST00000442216 HIST2H2BEQ16778 126 aa9.47□□□□□ -0.89
CSNK1E-210ENST00000442216 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.47□□□□□ -0.89
CSNK1E-210ENST00000442216 C7orf33Q8WU49 177 aa9.47□□□□□ -0.89
CSNK1E-210ENST00000442216 HIST1H2BHQ93079 126 aa9.47□□□□□ -0.89
CSNK1E-210ENST00000442216 HIST1H2BNQ99877 126 aa9.47□□□□□ -0.89
CSNK1E-210ENST00000442216 HIST1H2BMQ99879 126 aa9.47□□□□□ -0.89
CSNK1E-210ENST00000442216 C11orf86A6NJI1 115 aa9.46□□□□□ -0.9
CSNK1E-210ENST00000442216 NUPR1O60356 82 aa9.46□□□□□ -0.9
CSNK1E-210ENST00000442216 Q6ZRP5 223 aa9.46□□□□□ -0.9
CSNK1E-210ENST00000442216 HSPB8Q9UJY1 196 aa9.46□□□□□ -0.9
CSNK1E-210ENST00000442216 FAT1Q14517 4588 aa9.45□□□□□ -0.9
CSNK1E-210ENST00000442216 C9orf116Q5BN46 136 aaPredicted RBP9.44□□□□□ -0.9
CSNK1E-210ENST00000442216 TMEM170BQ5T4T1 132 aa9.44□□□□□ -0.9
CSNK1E-210ENST00000442216 A0A1W2PNN7 141 aa9.43□□□□□ -0.9
CSNK1E-210ENST00000442216 GAGE2EQ4V326 116 aa9.43□□□□□ -0.9
CSNK1E-210ENST00000442216 GAGE2DQ9UEU5 116 aa9.43□□□□□ -0.9
CSNK1E-210ENST00000442216 ATP6V1G1O75348 118 aa9.42□□□□□ -0.9
CSNK1E-210ENST00000442216 ODF1Q14990 250 aa9.42□□□□□ -0.9
CSNK1E-210ENST00000442216 SFTA2Q6UW10 78 aa9.42□□□□□ -0.9
CSNK1E-210ENST00000442216 SRRM2Q9UQ35 2752 aaKnown RBP9.41□□□□□ -0.9
CSNK1E-210ENST00000442216 TMEM223A0PJW6 202 aa9.4□□□□□ -0.9
CSNK1E-210ENST00000442216 FABP4P15090 132 aa9.4□□□□□ -0.9
CSNK1E-210ENST00000442216 VPS13BQ7Z7G8 4022 aa9.4□□□□□ -0.9
CSNK1E-210ENST00000442216 COA6Q5JTJ3 125 aaKnown RBP9.39□□□□□ -0.91
CSNK1E-210ENST00000442216 MAP1LC3CQ9BXW4 147 aa9.39□□□□□ -0.91
CSNK1E-210ENST00000442216 H0Y8G0 127 aa9.38□□□□□ -0.91
CSNK1E-210ENST00000442216 PLNP26678 52 aa9.38□□□□□ -0.91
CSNK1E-210ENST00000442216 C9orf129Q5T035 196 aaKnown RBP9.38□□□□□ -0.91
CSNK1E-210ENST00000442216 COX17Q14061 63 aa9.37□□□□□ -0.91
CSNK1E-210ENST00000442216 FAM168BA1KXE4 195 aa9.36□□□□□ -0.91
CSNK1E-210ENST00000442216 PRR3P79522 188 aaKnown RBP9.36□□□□□ -0.91
CSNK1E-210ENST00000442216 ABCA13Q86UQ4 5058 aa9.35□□□□□ -0.91
CSNK1E-210ENST00000442216 DPM2O94777 84 aa9.35□□□□□ -0.91
CSNK1E-210ENST00000442216 FAM19A5Q7Z5A7 132 aaPredicted RBP9.35□□□□□ -0.91
CSNK1E-210ENST00000442216 ZNF625Q96I27 306 aaPredicted RBP9.35□□□□□ -0.91
CSNK1E-210ENST00000442216 FLG2Q5D862 2391 aaPredicted RBP9.35□□□□□ -0.91
CSNK1E-210ENST00000442216 PHF5AQ7RTV0 110 aaKnown RBP9.34□□□□□ -0.91
CSNK1E-210ENST00000442216 KRTAP7-1Q8IUC3 87 aa9.34□□□□□ -0.91
CSNK1E-210ENST00000442216 XAGE1AQ9HD64 81 aa9.34□□□□□ -0.91
CSNK1E-210ENST00000442216 ERG28Q9UKR5 140 aa9.34□□□□□ -0.91
CSNK1E-210ENST00000442216 PLA2G2DQ9UNK4 145 aa9.34□□□□□ -0.91
CSNK1E-210ENST00000442216 PCLOQ9Y6V0 5065 aa9.34□□□□□ -0.91
CSNK1E-210ENST00000442216 SYS1-DBNDD2H3BUS1 97 aa9.33□□□□□ -0.92
CSNK1E-210ENST00000442216 M0QXV9 152 aa9.33□□□□□ -0.92
CSNK1E-210ENST00000442216 IGKCP01834 107 aa9.33□□□□□ -0.92
CSNK1E-210ENST00000442216 HNRNPA3P51991 378 aaKnown RBP9.32□□□□□ -0.92
CSNK1E-210ENST00000442216 TP73-AS1Q9UF72 201 aa9.32□□□□□ -0.92
CSNK1E-210ENST00000442216 PFN2P35080 140 aa9.31□□□□□ -0.92
CSNK1E-210ENST00000442216 HERVK_113P61574 105 aa9.31□□□□□ -0.92
CSNK1E-210ENST00000442216 HERV-K104P63124 156 aa9.31□□□□□ -0.92
CSNK1E-210ENST00000442216 PET117Q6UWS5 81 aa9.31□□□□□ -0.92
CSNK1E-210ENST00000442216 PLEKHB2Q96CS7 222 aa9.31□□□□□ -0.92
CSNK1E-210ENST00000442216 KRTAP29-1A8MX34 341 aaPredicted RBP9.3□□□□□ -0.92
CSNK1E-210ENST00000442216 LEPROTO15243 131 aa9.3□□□□□ -0.92
CSNK1E-210ENST00000442216 SERTAD4-AS1Q5TG53 156 aa9.3□□□□□ -0.92
CSNK1E-210ENST00000442216 LINC01545Q5VT33 79 aa9.3□□□□□ -0.92
CSNK1E-210ENST00000442216 PMCHL2Q9BQD1 86 aa9.3□□□□□ -0.92
CSNK1E-210ENST00000442216 PSORS1C2Q9UIG4 136 aa9.3□□□□□ -0.92
CSNK1E-210ENST00000442216 MYMXA0A1B0GTQ4 84 aa9.29□□□□□ -0.92
CSNK1E-210ENST00000442216 LINC00587B1AMM8 73 aa9.29□□□□□ -0.92
CSNK1E-210ENST00000442216 OXTP01178 125 aa9.29□□□□□ -0.92
CSNK1E-210ENST00000442216 LBHQ53QV2 105 aaPredicted RBP9.29□□□□□ -0.92
CSNK1E-210ENST00000442216 NDUFA12Q9UI09 145 aa9.29□□□□□ -0.92
CSNK1E-210ENST00000442216 C22orf24Q9Y442 160 aa9.29□□□□□ -0.92
CSNK1E-210ENST00000442216 IGLV5-37A0A075B6J1 123 aa9.28□□□□□ -0.92
CSNK1E-210ENST00000442216 SPINK6Q6UWN8 80 aa9.28□□□□□ -0.92
CSNK1E-210ENST00000442216 C3orf79P0CE67 100 aa9.27□□□□□ -0.93
CSNK1E-210ENST00000442216 NMUP48645 174 aa9.27□□□□□ -0.93
CSNK1E-210ENST00000442216 UBE2BP63146 152 aa9.27□□□□□ -0.93
CSNK1E-210ENST00000442216 SND1-IT1Q9HBX3 110 aa9.27□□□□□ -0.93
CSNK1E-210ENST00000442216 J3QQQ9 107 aa9.26□□□□□ -0.93
CSNK1E-210ENST00000442216 LINC00158P58513 81 aa9.26□□□□□ -0.93
CSNK1E-210ENST00000442216 SRSF9Q13242 221 aaKnown RBP eCLIP9.26□□□□□ -0.93
CSNK1E-210ENST00000442216 C1orf137Q5JT78 98 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms