RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 MRPL52Q86TS9 123 aaKnown RBP6.18□□□□□ -1.42
SYN3-204ENST00000441821 A0A1B0GUV1 79 aa6.17□□□□□ -1.42
SYN3-204ENST00000441821 C3orf79P0CE67 100 aa6.17□□□□□ -1.42
SYN3-204ENST00000441821 FGF6P10767 208 aa6.17□□□□□ -1.42
SYN3-204ENST00000441821 HERVK_113P61574 105 aa6.17□□□□□ -1.42
SYN3-204ENST00000441821 MRPS36P82909 103 aaKnown RBP6.17□□□□□ -1.42
SYN3-204ENST00000441821 C15orf56Q8N910 161 aa6.17□□□□□ -1.42
SYN3-204ENST00000441821 LINC00474Q9P2X8 69 aa6.17□□□□□ -1.42
SYN3-204ENST00000441821 IGLV4-60A0A075B6I1 120 aa6.16□□□□□ -1.42
SYN3-204ENST00000441821 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.16□□□□□ -1.42
SYN3-204ENST00000441821 IGKV2-29A2NJV5 120 aaPredicted RBP6.16□□□□□ -1.42
SYN3-204ENST00000441821 IGIPA6NJ69 53 aa6.16□□□□□ -1.42
SYN3-204ENST00000441821 IFITM10A6NMD0 228 aa6.16□□□□□ -1.42
SYN3-204ENST00000441821 CCL25O15444 150 aa6.16□□□□□ -1.42
SYN3-204ENST00000441821 DPM2O94777 84 aa6.16□□□□□ -1.42
SYN3-204ENST00000441821 VAMP8Q9BV40 100 aa6.16□□□□□ -1.42
SYN3-204ENST00000441821 CHTOPQ9Y3Y2 248 aaKnown RBP6.16□□□□□ -1.42
SYN3-204ENST00000441821 A0A096LNI7 61 aa6.15□□□□□ -1.42
SYN3-204ENST00000441821 A0A096LNJ9 63 aa6.15□□□□□ -1.42
SYN3-204ENST00000441821 F8VRH5 84 aa6.15□□□□□ -1.42
SYN3-204ENST00000441821 RPL39P62891 51 aaKnown RBP6.15□□□□□ -1.42
SYN3-204ENST00000441821 ZNF664Q8N3J9 261 aa6.15□□□□□ -1.42
SYN3-204ENST00000441821 GEMIN7Q9H840 131 aaKnown RBP6.15□□□□□ -1.42
SYN3-204ENST00000441821 UBE2D4Q9Y2X8 147 aa6.15□□□□□ -1.42
SYN3-204ENST00000441821 H3BRM9 83 aa6.14□□□□□ -1.43
SYN3-204ENST00000441821 IGKCP01834 107 aa6.14□□□□□ -1.43
SYN3-204ENST00000441821 HIGD2BQ4VC39 106 aa6.14□□□□□ -1.43
SYN3-204ENST00000441821 LCE2AQ5TA79 106 aaPredicted RBP6.14□□□□□ -1.43
SYN3-204ENST00000441821 LINC01545Q5VT33 79 aa6.14□□□□□ -1.43
SYN3-204ENST00000441821 PSORS1C2Q9UIG4 136 aa6.14□□□□□ -1.43
SYN3-204ENST00000441821 IGLV4-3A0A075B6K6 122 aa6.13□□□□□ -1.43
SYN3-204ENST00000441821 GAGE12HA6NDE8 117 aa6.13□□□□□ -1.43
SYN3-204ENST00000441821 SS18Q15532 418 aa6.13□□□□□ -1.43
SYN3-204ENST00000441821 C12orf57Q99622 126 aa6.13□□□□□ -1.43
SYN3-204ENST00000441821 CST9LQ9H4G1 147 aa6.13□□□□□ -1.43
SYN3-204ENST00000441821 PKIGQ9Y2B9 76 aa6.13□□□□□ -1.43
SYN3-204ENST00000441821 GVQW2A0A096LPI5 108 aaPredicted RBP6.12□□□□□ -1.43
SYN3-204ENST00000441821 TSTD3H0UI37 97 aa6.12□□□□□ -1.43
SYN3-204ENST00000441821 HERVK_113P63121 156 aa6.12□□□□□ -1.43
SYN3-204ENST00000441821 PYY3Q5JQD4 70 aa6.11□□□□□ -1.43
SYN3-204ENST00000441821 TMEM170BQ5T4T1 132 aa6.11□□□□□ -1.43
SYN3-204ENST00000441821 LINC00173Q6ZV60 143 aa6.11□□□□□ -1.43
SYN3-204ENST00000441821 CDC42SE2Q9NRR3 84 aa6.11□□□□□ -1.43
SYN3-204ENST00000441821 Q6ZUT4 128 aa6.1□□□□□ -1.43
SYN3-204ENST00000441821 LINC00518Q8N0U6 118 aa6.1□□□□□ -1.43
SYN3-204ENST00000441821 AMELXQ99217 191 aa6.1□□□□□ -1.43
SYN3-204ENST00000441821 MRPL35Q9NZE8 188 aaKnown RBP6.1□□□□□ -1.43
SYN3-204ENST00000441821 TRAV13-1A0A0B4J241 112 aa6.09□□□□□ -1.43
SYN3-204ENST00000441821 TINCRA0A1B0GVN0 87 aa6.09□□□□□ -1.43
SYN3-204ENST00000441821 C11orf86A6NJI1 115 aa6.09□□□□□ -1.43
SYN3-204ENST00000441821 PRR26Q8N8Z3 221 aa6.09□□□□□ -1.43
SYN3-204ENST00000441821 CHCHD10Q8WYQ3 142 aaPredicted RBP6.09□□□□□ -1.43
SYN3-204ENST00000441821 PMCHL2Q9BQD1 86 aa6.09□□□□□ -1.43
SYN3-204ENST00000441821 IGKV3OR2-268A0A0C4DH90 116 aa6.08□□□□□ -1.44
SYN3-204ENST00000441821 IGLC3P0DOY3 106 aa6.08□□□□□ -1.44
SYN3-204ENST00000441821 PRR4Q16378 134 aa6.08□□□□□ -1.44
SYN3-204ENST00000441821 SPATA45Q537H7 98 aa6.08□□□□□ -1.44
SYN3-204ENST00000441821 LINC00469Q8N7U9 141 aa6.08□□□□□ -1.44
SYN3-204ENST00000441821 PAM16Q9Y3D7 125 aa6.08□□□□□ -1.44
SYN3-204ENST00000441821 APOMO95445 188 aa6.07□□□□□ -1.44
SYN3-204ENST00000441821 LGALS3P17931 250 aaKnown RBP6.07□□□□□ -1.44
SYN3-204ENST00000441821 UBE2D1P51668 147 aa6.07□□□□□ -1.44
SYN3-204ENST00000441821 PTTG1IPP53801 180 aa6.07□□□□□ -1.44
SYN3-204ENST00000441821 FOXI1Q12951 378 aa6.07□□□□□ -1.44
SYN3-204ENST00000441821 ZC2HC1BQ5TFG8 222 aa6.07□□□□□ -1.44
SYN3-204ENST00000441821 SFTA2Q6UW10 78 aa6.07□□□□□ -1.44
SYN3-204ENST00000441821 ATOH7Q8N100 152 aa6.07□□□□□ -1.44
SYN3-204ENST00000441821 PLEKHB2Q96CS7 222 aa6.07□□□□□ -1.44
SYN3-204ENST00000441821 CARD19Q96LW7 228 aa6.07□□□□□ -1.44
SYN3-204ENST00000441821 OPRPNQ99935 248 aaPredicted RBP6.07□□□□□ -1.44
SYN3-204ENST00000441821 MALP21145 153 aa6.06□□□□□ -1.44
SYN3-204ENST00000441821 NMUP48645 174 aa6.06□□□□□ -1.44
SYN3-204ENST00000441821 RNASE13Q5GAN3 156 aaKnown RBP6.06□□□□□ -1.44
SYN3-204ENST00000441821 DIRC1Q969H9 104 aa6.06□□□□□ -1.44
SYN3-204ENST00000441821 MUC17Q685J3 4493 aa6.05□□□□□ -1.44
SYN3-204ENST00000441821 IGHV1-58A0A0C4DH39 117 aa6.05□□□□□ -1.44
SYN3-204ENST00000441821 LINC00959A0A1B0GUT2 108 aa6.05□□□□□ -1.44
SYN3-204ENST00000441821 A0A1W2PNN7 141 aa6.05□□□□□ -1.44
SYN3-204ENST00000441821 PRSS2P07478 247 aa6.05□□□□□ -1.44
SYN3-204ENST00000441821 C1orf137Q5JT78 98 aa6.05□□□□□ -1.44
SYN3-204ENST00000441821 FAM19A3Q7Z5A8 133 aa6.05□□□□□ -1.44
SYN3-204ENST00000441821 LINC00526Q96FQ7 95 aa6.05□□□□□ -1.44
SYN3-204ENST00000441821 UQCR10Q9UDW1 63 aa6.05□□□□□ -1.44
SYN3-204ENST00000441821 IGLV4-69A0A075B6H9 119 aa6.04□□□□□ -1.44
SYN3-204ENST00000441821 IGLV1-50A0A075B6I6 118 aa6.04□□□□□ -1.44
SYN3-204ENST00000441821 LINC00587B1AMM8 73 aa6.04□□□□□ -1.44
SYN3-204ENST00000441821 E9PLD3 99 aa6.04□□□□□ -1.44
SYN3-204ENST00000441821 COX7A2LO14548 114 aa6.04□□□□□ -1.44
SYN3-204ENST00000441821 SYCNQ0VAF6 134 aa6.04□□□□□ -1.44
SYN3-204ENST00000441821 GAGE2BQ13066 116 aa6.04□□□□□ -1.44
SYN3-204ENST00000441821 LINC00242Q5T6M2 205 aa6.04□□□□□ -1.44
SYN3-204ENST00000441821 SLC25A34Q6PIV7 304 aa6.04□□□□□ -1.44
SYN3-204ENST00000441821 CD164L2Q6UWJ8 174 aa6.04□□□□□ -1.44
SYN3-204ENST00000441821 LINC01561Q8N1V8 128 aa6.04□□□□□ -1.44
SYN3-204ENST00000441821 LOC107984640A0A0U1RRK4 108 aa6.03□□□□□ -1.44
SYN3-204ENST00000441821 LEPROTO15243 131 aa6.03□□□□□ -1.44
SYN3-204ENST00000441821 ZNF22P17026 224 aaPredicted RBP6.03□□□□□ -1.44
SYN3-204ENST00000441821 XCL1P47992 114 aa6.03□□□□□ -1.44
SYN3-204ENST00000441821 IGLV5-45A0A087WSX0 123 aa6.02□□□□□ -1.45
SYN3-204ENST00000441821 TMEM223A0PJW6 202 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms