RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 INAFM2P0DMQ5 153 aa7.19□□□□□ -1.26
CD44-210ENST00000434472 COX17Q14061 63 aa7.19□□□□□ -1.26
CD44-210ENST00000434472 SMIM11BQ8TCY0 68 aa7.19□□□□□ -1.26
CD44-210ENST00000434472 ACANP16112 2415 aa7.19□□□□□ -1.26
CD44-210ENST00000434472 FLNBO75369 2602 aaKnown RBP7.19□□□□□ -1.26
CD44-210ENST00000434472 A0A096LPF7 62 aa7.19□□□□□ -1.26
CD44-210ENST00000434472 DNAL4O96015 105 aa7.19□□□□□ -1.26
CD44-210ENST00000434472 WFDC9Q8NEX5 89 aa7.19□□□□□ -1.26
CD44-210ENST00000434472 FAM218AQ96MZ4 157 aa7.19□□□□□ -1.26
CD44-210ENST00000434472 NOTCH3Q9UM47 2321 aa7.19□□□□□ -1.26
CD44-210ENST00000434472 NF1P21359 2839 aa7.18□□□□□ -1.26
CD44-210ENST00000434472 WIPF1O43516 503 aa7.18□□□□□ -1.26
CD44-210ENST00000434472 MALP21145 153 aa7.18□□□□□ -1.26
CD44-210ENST00000434472 LINC00269Q8N2A0 174 aa7.18□□□□□ -1.26
CD44-210ENST00000434472 Q8NAQ8 132 aa7.18□□□□□ -1.26
CD44-210ENST00000434472 CHCHD10Q8WYQ3 142 aaPredicted RBP7.18□□□□□ -1.26
CD44-210ENST00000434472 HELZ2Q9BYK8 2649 aaKnown RBP7.18□□□□□ -1.26
CD44-210ENST00000434472 NDUFC2O95298 119 aa7.17□□□□□ -1.26
CD44-210ENST00000434472 ANGP03950 147 aaKnown RBP7.17□□□□□ -1.26
CD44-210ENST00000434472 REG3AQ06141 175 aa7.17□□□□□ -1.26
CD44-210ENST00000434472 LELP1Q5T871 98 aa7.17□□□□□ -1.26
CD44-210ENST00000434472 OR13C6PQ8NH95 151 aa7.17□□□□□ -1.26
CD44-210ENST00000434472 SPATA3Q8NHX4 192 aa7.17□□□□□ -1.26
CD44-210ENST00000434472 MUC7Q8TAX7 377 aa7.17□□□□□ -1.26
CD44-210ENST00000434472 JMJD1CQ15652 2540 aa7.17□□□□□ -1.26
CD44-210ENST00000434472 ZNF469Q96JG9 3925 aaPredicted RBP7.17□□□□□ -1.26
CD44-210ENST00000434472 UNC79Q9P2D8 2635 aa7.17□□□□□ -1.26
CD44-210ENST00000434472 TTC32Q5I0X7 151 aa7.16□□□□□ -1.26
CD44-210ENST00000434472 CLPSL2Q6UWE3 100 aa7.16□□□□□ -1.26
CD44-210ENST00000434472 ANAPC13Q9BS18 74 aa7.16□□□□□ -1.26
CD44-210ENST00000434472 C11orf68Q9H3H3 251 aaKnown RBP7.16□□□□□ -1.26
CD44-210ENST00000434472 MTORP42345 2549 aa7.16□□□□□ -1.26
CD44-210ENST00000434472 DEFB4AO15263 64 aa7.16□□□□□ -1.26
CD44-210ENST00000434472 KIAA0087Q14695 138 aa7.16□□□□□ -1.26
CD44-210ENST00000434472 A0A1B0GX51 115 aa7.15□□□□□ -1.27
CD44-210ENST00000434472 CELA1Q9UNI1 258 aa7.15□□□□□ -1.27
CD44-210ENST00000434472 KLK5Q9Y337 293 aaPredicted RBP7.15□□□□□ -1.27
CD44-210ENST00000434472 SETD2Q9BYW2 2564 aaPredicted RBP7.14□□□□□ -1.27
CD44-210ENST00000434472 Q9HAA7 133 aa7.14□□□□□ -1.27
CD44-210ENST00000434472 C2CD3Q4AC94 2353 aa7.14□□□□□ -1.27
CD44-210ENST00000434472 A0A087WYN8 130 aa7.13□□□□□ -1.27
CD44-210ENST00000434472 TRBV7-7A0A0K0K1E9 115 aa7.13□□□□□ -1.27
CD44-210ENST00000434472 IGHV4-30-4P0DP06 118 aa7.13□□□□□ -1.27
CD44-210ENST00000434472 LINC00643Q86TS7 51 aa7.13□□□□□ -1.27
CD44-210ENST00000434472 IMUPQ9GZP8 106 aa7.13□□□□□ -1.27
CD44-210ENST00000434472 C22orf24Q9Y442 160 aa7.13□□□□□ -1.27
CD44-210ENST00000434472 ITPR2Q14571 2701 aa7.13□□□□□ -1.27
CD44-210ENST00000434472 NDUFV3P56181 108 aaKnown RBP7.12□□□□□ -1.27
CD44-210ENST00000434472 TMEM126AQ9H061 195 aa7.12□□□□□ -1.27
CD44-210ENST00000434472 LECT2O14960 151 aa7.12□□□□□ -1.27
CD44-210ENST00000434472 HTN3P15516 51 aa7.12□□□□□ -1.27
CD44-210ENST00000434472 IGLV10-54A0A075B6I4 117 aa7.11□□□□□ -1.27
CD44-210ENST00000434472 LINC00167Q96N53 147 aa7.11□□□□□ -1.27
CD44-210ENST00000434472 PRR34Q9NV39 138 aa7.11□□□□□ -1.27
CD44-210ENST00000434472 ORMDL1Q9P0S3 153 aa7.11□□□□□ -1.27
CD44-210ENST00000434472 H3BNG1 76 aa7.1□□□□□ -1.27
CD44-210ENST00000434472 SPAG11BQ08648 103 aa7.1□□□□□ -1.27
CD44-210ENST00000434472 SDIM1Q6ZPB5 146 aa7.1□□□□□ -1.27
CD44-210ENST00000434472 OBSCN-AS1Q96MR7 158 aa7.1□□□□□ -1.27
CD44-210ENST00000434472 MAST4O15021 2626 aa7.1□□□□□ -1.27
CD44-210ENST00000434472 NBPF19A0A087WUL8 3843 aa7.1□□□□□ -1.27
CD44-210ENST00000434472 GAGE2AQ6NT46 116 aa7.09□□□□□ -1.27
CD44-210ENST00000434472 GVQW2A0A096LPI5 108 aaPredicted RBP7.09□□□□□ -1.28
CD44-210ENST00000434472 A0A0J9YWU9 116 aa7.09□□□□□ -1.28
CD44-210ENST00000434472 CYSRT1A8MQ03 144 aa7.09□□□□□ -1.28
CD44-210ENST00000434472 LYPD5Q6UWN5 251 aa7.09□□□□□ -1.28
CD44-210ENST00000434472 Q8N3U1 123 aa7.09□□□□□ -1.28
CD44-210ENST00000434472 NHLRC4P0CG21 123 aaPredicted RBP7.08□□□□□ -1.28
CD44-210ENST00000434472 NANOS2P60321 138 aaKnown RBP7.08□□□□□ -1.28
CD44-210ENST00000434472 KLK12Q9UKR0 248 aa7.08□□□□□ -1.28
CD44-210ENST00000434472 JMJD7-PLA2G4BH0Y9G9 81 aa7.07□□□□□ -1.28
CD44-210ENST00000434472 S100A7L2Q5SY68 101 aa7.07□□□□□ -1.28
CD44-210ENST00000434472 NIPBLQ6KC79 2804 aaeCLIP7.06□□□□□ -1.28
CD44-210ENST00000434472 ENHOQ6UWT2 76 aa7.06□□□□□ -1.28
CD44-210ENST00000434472 UNQ6190/PRO20217Q6UXQ8 127 aa7.06□□□□□ -1.28
CD44-210ENST00000434472 Q8N814 137 aa7.06□□□□□ -1.28
CD44-210ENST00000434472 TMEM256-PLSCR3K7ERE1 68 aa7.05□□□□□ -1.28
CD44-210ENST00000434472 C9orf116Q5BN46 136 aaPredicted RBP7.05□□□□□ -1.28
CD44-210ENST00000434472 SMCR5Q8TEV8 140 aa7.05□□□□□ -1.28
CD44-210ENST00000434472 H3BQ85 93 aa7.05□□□□□ -1.28
CD44-210ENST00000434472 NCR3O14931 201 aa7.05□□□□□ -1.28
CD44-210ENST00000434472 PRR3P79522 188 aaKnown RBP7.05□□□□□ -1.28
CD44-210ENST00000434472 C14orf132Q9NPU4 83 aa7.05□□□□□ -1.28
CD44-210ENST00000434472 SLPIP03973 132 aa7.04□□□□□ -1.28
CD44-210ENST00000434472 C6orf223Q8N319 242 aa7.04□□□□□ -1.28
CD44-210ENST00000434472 FN1P02751 2386 aaKnown RBP7.03□□□□□ -1.28
CD44-210ENST00000434472 C10orf25Q5T742 122 aa7.03□□□□□ -1.28
CD44-210ENST00000434472 KPRPQ5T749 579 aaPredicted RBP7.03□□□□□ -1.28
CD44-210ENST00000434472 CCKP06307 115 aa7.02□□□□□ -1.29
CD44-210ENST00000434472 EGFEM1PQ0D2K5 195 aa7.02□□□□□ -1.29
CD44-210ENST00000434472 C6orf99Q4VX62 202 aa7.02□□□□□ -1.29
CD44-210ENST00000434472 Q6JHZ5 121 aa7.02□□□□□ -1.29
CD44-210ENST00000434472 LINC00575Q6W349 94 aa7.02□□□□□ -1.29
CD44-210ENST00000434472 CUBNO60494 3623 aa7.02□□□□□ -1.29
CD44-210ENST00000434472 F8WDY8 70 aa7.01□□□□□ -1.29
CD44-210ENST00000434472 IGLV6-57P01721 117 aa7.01□□□□□ -1.29
CD44-210ENST00000434472 C9orf129Q5T035 196 aaKnown RBP7.01□□□□□ -1.29
CD44-210ENST00000434472 FAM236AA0A1B0GUQ0 79 aa7.01□□□□□ -1.29
CD44-210ENST00000434472 FAM236BA0A1B0GV22 79 aa7.01□□□□□ -1.29
CD44-210ENST00000434472 hADV29S1A0JD25 119 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms