RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 KIAA1109Q2LD37 5005 aa9.58□□□□□ -0.88
GARNL3-204ENST00000429629 LOC107984640A0A0U1RRK4 108 aa9.57□□□□□ -0.88
GARNL3-204ENST00000429629 TMEM170BQ5T4T1 132 aa9.57□□□□□ -0.88
GARNL3-204ENST00000429629 SFTA2Q6UW10 78 aa9.57□□□□□ -0.88
GARNL3-204ENST00000429629 PET117Q6UWS5 81 aa9.57□□□□□ -0.88
GARNL3-204ENST00000429629 UNQ6190/PRO20217Q6UXQ8 127 aa9.57□□□□□ -0.88
GARNL3-204ENST00000429629 COX7B2Q8TF08 81 aa9.57□□□□□ -0.88
GARNL3-204ENST00000429629 TMEM223A0PJW6 202 aa9.56□□□□□ -0.88
GARNL3-204ENST00000429629 DPM2O94777 84 aa9.56□□□□□ -0.88
GARNL3-204ENST00000429629 SPINK8P0C7L1 97 aa9.56□□□□□ -0.88
GARNL3-204ENST00000429629 C10orf25Q5T742 122 aa9.56□□□□□ -0.88
GARNL3-204ENST00000429629 TOMM7Q9P0U1 55 aa9.56□□□□□ -0.88
GARNL3-204ENST00000429629 S100A6P06703 90 aa9.55□□□□□ -0.88
GARNL3-204ENST00000429629 C6orf48Q9UBA6 75 aa9.55□□□□□ -0.88
GARNL3-204ENST00000429629 IGKCP01834 107 aa9.54□□□□□ -0.88
GARNL3-204ENST00000429629 AKR1D1P51857 326 aa9.54□□□□□ -0.88
GARNL3-204ENST00000429629 LINC01545Q5VT33 79 aa9.54□□□□□ -0.88
GARNL3-204ENST00000429629 C2orf82Q6UX34 121 aa9.54□□□□□ -0.88
GARNL3-204ENST00000429629 SPACA4Q8TDM5 124 aa9.54□□□□□ -0.88
GARNL3-204ENST00000429629 RYR1P21817 5038 aa9.53□□□□□ -0.88
GARNL3-204ENST00000429629 H0Y8G0 127 aa9.53□□□□□ -0.88
GARNL3-204ENST00000429629 PTTG1IPP53801 180 aa9.53□□□□□ -0.88
GARNL3-204ENST00000429629 HIST3H2BBQ8N257 126 aa9.53□□□□□ -0.88
GARNL3-204ENST00000429629 CIRBP-AS1Q8TBR5 109 aa9.53□□□□□ -0.88
GARNL3-204ENST00000429629 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.53□□□□□ -0.88
GARNL3-204ENST00000429629 HSPG2P98160 4391 aa9.52□□□□□ -0.89
GARNL3-204ENST00000429629 EPM2AB3EWF7 344 aa9.52□□□□□ -0.89
GARNL3-204ENST00000429629 NDUFC2-KCTD14E9PQ53 114 aa9.52□□□□□ -0.89
GARNL3-204ENST00000429629 C3orf79P0CE67 100 aa9.52□□□□□ -0.89
GARNL3-204ENST00000429629 SCXQ7RTU7 201 aa9.52□□□□□ -0.89
GARNL3-204ENST00000429629 A0A096LNI7 61 aa9.51□□□□□ -0.89
GARNL3-204ENST00000429629 PLAC8Q9NZF1 115 aa9.51□□□□□ -0.89
GARNL3-204ENST00000429629 C5orf52A6NGY3 159 aa9.5□□□□□ -0.89
GARNL3-204ENST00000429629 PANO1I0J062 215 aa9.5□□□□□ -0.89
GARNL3-204ENST00000429629 S100A2P29034 98 aa9.5□□□□□ -0.89
GARNL3-204ENST00000429629 HERVK_113P61574 105 aa9.5□□□□□ -0.89
GARNL3-204ENST00000429629 DPH3Q96FX2 82 aa9.5□□□□□ -0.89
GARNL3-204ENST00000429629 HIST1H2BLQ99880 126 aa9.5□□□□□ -0.89
GARNL3-204ENST00000429629 C20orf202A1L168 122 aa9.49□□□□□ -0.89
GARNL3-204ENST00000429629 COX17Q14061 63 aa9.49□□□□□ -0.89
GARNL3-204ENST00000429629 Q6ZRP5 223 aa9.49□□□□□ -0.89
GARNL3-204ENST00000429629 ZNF625Q96I27 306 aaPredicted RBP9.49□□□□□ -0.89
GARNL3-204ENST00000429629 HERC2O95714 4834 aa9.49□□□□□ -0.89
GARNL3-204ENST00000429629 A0A087WYN8 130 aa9.48□□□□□ -0.89
GARNL3-204ENST00000429629 CHTF8P0CG12 524 aa9.48□□□□□ -0.89
GARNL3-204ENST00000429629 KRTDAPP60985 99 aa9.48□□□□□ -0.89
GARNL3-204ENST00000429629 GAGE2BQ13066 116 aa9.48□□□□□ -0.89
GARNL3-204ENST00000429629 MAJINQ3KP22 176 aa9.48□□□□□ -0.89
GARNL3-204ENST00000429629 Q8N1X5 172 aa9.48□□□□□ -0.89
GARNL3-204ENST00000429629 PLEKHB2Q96CS7 222 aa9.48□□□□□ -0.89
GARNL3-204ENST00000429629 IGKV2-24A0A0C4DH68 120 aa9.47□□□□□ -0.89
GARNL3-204ENST00000429629 LINC00587B1AMM8 73 aa9.47□□□□□ -0.89
GARNL3-204ENST00000429629 LEPROTO15243 131 aa9.47□□□□□ -0.89
GARNL3-204ENST00000429629 SNRPEP62304 92 aaKnown RBP9.47□□□□□ -0.89
GARNL3-204ENST00000429629 RPL18AQ02543 176 aaKnown RBP9.47□□□□□ -0.89
GARNL3-204ENST00000429629 PMCHL2Q9BQD1 86 aa9.47□□□□□ -0.89
GARNL3-204ENST00000429629 HERV-K104P63124 156 aa9.46□□□□□ -0.9
GARNL3-204ENST00000429629 C9orf116Q5BN46 136 aaPredicted RBP9.46□□□□□ -0.9
GARNL3-204ENST00000429629 E9PLD3 99 aa9.45□□□□□ -0.9
GARNL3-204ENST00000429629 NMUP48645 174 aa9.45□□□□□ -0.9
GARNL3-204ENST00000429629 STPG4Q8N801 248 aa9.45□□□□□ -0.9
GARNL3-204ENST00000429629 FAM229AH3BQW9 127 aa9.44□□□□□ -0.9
GARNL3-204ENST00000429629 FAT1Q14517 4588 aa9.44□□□□□ -0.9
GARNL3-204ENST00000429629 MYMXA0A1B0GTQ4 84 aa9.43□□□□□ -0.9
GARNL3-204ENST00000429629 J3QQQ9 107 aa9.43□□□□□ -0.9
GARNL3-204ENST00000429629 NDUFA12Q9UI09 145 aa9.43□□□□□ -0.9
GARNL3-204ENST00000429629 ERG28Q9UKR5 140 aa9.43□□□□□ -0.9
GARNL3-204ENST00000429629 GAGE2EQ4V326 116 aa9.42□□□□□ -0.9
GARNL3-204ENST00000429629 KRTAP3-3Q9BYR6 98 aa9.42□□□□□ -0.9
GARNL3-204ENST00000429629 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
GARNL3-204ENST00000429629 GAGE2DQ9UEU5 116 aa9.42□□□□□ -0.9
GARNL3-204ENST00000429629 A0A1W2PNN7 141 aa9.41□□□□□ -0.9
GARNL3-204ENST00000429629 HAMPP81172 84 aa9.41□□□□□ -0.9
GARNL3-204ENST00000429629 PLA2G2DQ9UNK4 145 aa9.41□□□□□ -0.9
GARNL3-204ENST00000429629 SMR3BP02814 79 aaPredicted RBP9.4□□□□□ -0.9
GARNL3-204ENST00000429629 LGALS3P17931 250 aaKnown RBP9.4□□□□□ -0.9
GARNL3-204ENST00000429629 C9orf129Q5T035 196 aaKnown RBP9.4□□□□□ -0.9
GARNL3-204ENST00000429629 TSPEAR-AS2P59090 65 aa9.39□□□□□ -0.91
GARNL3-204ENST00000429629 LINC00528Q8N1L1 170 aa9.39□□□□□ -0.91
GARNL3-204ENST00000429629 C7orf33Q8WU49 177 aa9.39□□□□□ -0.91
GARNL3-204ENST00000429629 PLA2G1BP04054 148 aaKnown RBP9.38□□□□□ -0.91
GARNL3-204ENST00000429629 PFN2P35080 140 aa9.38□□□□□ -0.91
GARNL3-204ENST00000429629 KRTAP17-1Q9BYP8 105 aa9.38□□□□□ -0.91
GARNL3-204ENST00000429629 Q5VSD8 79 aa9.37□□□□□ -0.91
GARNL3-204ENST00000429629 TP73-AS1Q9UF72 201 aa9.37□□□□□ -0.91
GARNL3-204ENST00000429629 LINC00158P58513 81 aa9.36□□□□□ -0.91
GARNL3-204ENST00000429629 KRTAP7-1Q8IUC3 87 aa9.36□□□□□ -0.91
GARNL3-204ENST00000429629 XAGE1AQ9HD64 81 aa9.36□□□□□ -0.91
GARNL3-204ENST00000429629 IGLV5-37A0A075B6J1 123 aa9.35□□□□□ -0.91
GARNL3-204ENST00000429629 SND1-IT1Q9HBX3 110 aa9.35□□□□□ -0.91
GARNL3-204ENST00000429629 LOC107984156A0A0G2JMH3 177 aa9.34□□□□□ -0.91
GARNL3-204ENST00000429629 LBHQ53QV2 105 aaPredicted RBP9.34□□□□□ -0.91
GARNL3-204ENST00000429629 MEIG1Q5JSS6 88 aa9.34□□□□□ -0.91
GARNL3-204ENST00000429629 ARL17AQ8IVW1 177 aa9.34□□□□□ -0.91
GARNL3-204ENST00000429629 FAM168BA1KXE4 195 aa9.33□□□□□ -0.92
GARNL3-204ENST00000429629 SMIM13P0DJ93 91 aa9.33□□□□□ -0.92
GARNL3-204ENST00000429629 KRTAP10-4P60372 401 aaPredicted RBP9.33□□□□□ -0.92
GARNL3-204ENST00000429629 IGKV2D-26A0A0A0MRZ7 120 aa9.32□□□□□ -0.92
GARNL3-204ENST00000429629 A0A0J9YXY3 114 aa9.32□□□□□ -0.92
GARNL3-204ENST00000429629 TIMM17BO60830 172 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms