RNA–Protein interactions for RNA: ENST00000427415.1

SDHAP1-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4 BASIC

Gene SDHAP1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-204ENST00000427415 HIST1H2BBP33778 126 aa14.39□□□□□ -0.11
SDHAP1-204ENST00000427415 HIST1H2BDP58876 126 aa14.39□□□□□ -0.11
SDHAP1-204ENST00000427415 HIST1H2BCP62807 126 aa14.39□□□□□ -0.11
SDHAP1-204ENST00000427415 HIST2H2BEQ16778 126 aa14.39□□□□□ -0.11
SDHAP1-204ENST00000427415 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.39□□□□□ -0.11
SDHAP1-204ENST00000427415 C10orf25Q5T742 122 aa14.39□□□□□ -0.11
SDHAP1-204ENST00000427415 HIST1H2BHQ93079 126 aa14.39□□□□□ -0.11
SDHAP1-204ENST00000427415 HIST1H2BNQ99877 126 aa14.39□□□□□ -0.11
SDHAP1-204ENST00000427415 HIST1H2BMQ99879 126 aa14.39□□□□□ -0.11
SDHAP1-204ENST00000427415 A0A087WYN8 130 aa14.38□□□□□ -0.11
SDHAP1-204ENST00000427415 RPL18AQ02543 176 aaKnown RBP14.38□□□□□ -0.11
SDHAP1-204ENST00000427415 C2orf82Q6UX34 121 aa14.38□□□□□ -0.11
SDHAP1-204ENST00000427415 KRTAP4-5Q9BYR2 181 aa14.38□□□□□ -0.11
SDHAP1-204ENST00000427415 C6orf48Q9UBA6 75 aa14.38□□□□□ -0.11
SDHAP1-204ENST00000427415 CHTOPQ9Y3Y2 248 aaKnown RBP14.38□□□□□ -0.11
SDHAP1-204ENST00000427415 FAT1Q14517 4588 aa14.38□□□□□ -0.11
SDHAP1-204ENST00000427415 SPINK8P0C7L1 97 aa14.37□□□□□ -0.11
SDHAP1-204ENST00000427415 CXCL5P42830 114 aa14.37□□□□□ -0.11
SDHAP1-204ENST00000427415 PTTG1IPP53801 180 aa14.37□□□□□ -0.11
SDHAP1-204ENST00000427415 GAGE2BQ13066 116 aa14.37□□□□□ -0.11
SDHAP1-204ENST00000427415 ZNF22P17026 224 aaPredicted RBP14.36□□□□□ -0.11
SDHAP1-204ENST00000427415 PLAC8Q9NZF1 115 aa14.36□□□□□ -0.11
SDHAP1-204ENST00000427415 HSPB8Q9UJY1 196 aa14.36□□□□□ -0.11
SDHAP1-204ENST00000427415 NUPR1O60356 82 aa14.35□□□□□ -0.11
SDHAP1-204ENST00000427415 PLA2G1BP04054 148 aaKnown RBP14.35□□□□□ -0.11
SDHAP1-204ENST00000427415 STPG4Q8N801 248 aa14.35□□□□□ -0.11
SDHAP1-204ENST00000427415 COX7B2Q8TF08 81 aa14.35□□□□□ -0.11
SDHAP1-204ENST00000427415 C11orf86A6NJI1 115 aa14.34□□□□□ -0.11
SDHAP1-204ENST00000427415 TLX1NBP0CAT3 122 aa14.34□□□□□ -0.11
SDHAP1-204ENST00000427415 ABCA13Q86UQ4 5058 aa14.34□□□□□ -0.11
SDHAP1-204ENST00000427415 PCLOQ9Y6V0 5065 aa14.33□□□□□ -0.12
SDHAP1-204ENST00000427415 F8VRH5 84 aa14.32□□□□□ -0.12
SDHAP1-204ENST00000427415 TMEM170BQ5T4T1 132 aa14.32□□□□□ -0.12
SDHAP1-204ENST00000427415 FABP4P15090 132 aa14.31□□□□□ -0.12
SDHAP1-204ENST00000427415 NDUFC2-KCTD14E9PQ53 114 aa14.3□□□□□ -0.12
SDHAP1-204ENST00000427415 H0Y8G0 127 aa14.3□□□□□ -0.12
SDHAP1-204ENST00000427415 VPS13BQ7Z7G8 4022 aa14.29□□□□□ -0.12
SDHAP1-204ENST00000427415 IGLV5-39A0A0G2JS06 123 aa14.29□□□□□ -0.12
SDHAP1-204ENST00000427415 Q6ZRP5 223 aa14.29□□□□□ -0.12
SDHAP1-204ENST00000427415 ODF1Q14990 250 aa14.27□□□□□ -0.13
SDHAP1-204ENST00000427415 C9orf116Q5BN46 136 aaPredicted RBP14.27□□□□□ -0.13
SDHAP1-204ENST00000427415 C7orf33Q8WU49 177 aa14.27□□□□□ -0.13
SDHAP1-204ENST00000427415 RPL37AP61513 92 aaKnown RBP14.26□□□□□ -0.13
SDHAP1-204ENST00000427415 GAGE2EQ4V326 116 aa14.26□□□□□ -0.13
SDHAP1-204ENST00000427415 GAGE2DQ9UEU5 116 aa14.26□□□□□ -0.13
SDHAP1-204ENST00000427415 MAP1LC3CQ9BXW4 147 aa14.25□□□□□ -0.13
SDHAP1-204ENST00000427415 COA6Q5JTJ3 125 aaKnown RBP14.24□□□□□ -0.13
SDHAP1-204ENST00000427415 SRRM2Q9UQ35 2752 aaKnown RBP14.23□□□□□ -0.13
SDHAP1-204ENST00000427415 TMEM223A0PJW6 202 aa14.23□□□□□ -0.13
SDHAP1-204ENST00000427415 PLNP26678 52 aa14.23□□□□□ -0.13
SDHAP1-204ENST00000427415 INAFM2P0DMQ5 153 aa14.22□□□□□ -0.13
SDHAP1-204ENST00000427415 SFTA2Q6UW10 78 aa14.22□□□□□ -0.13
SDHAP1-204ENST00000427415 A0A1W2PNN7 141 aa14.21□□□□□ -0.13
SDHAP1-204ENST00000427415 DPM2O94777 84 aa14.19□□□□□ -0.14
SDHAP1-204ENST00000427415 KRTAP10-4P60372 401 aaPredicted RBP14.18□□□□□ -0.14
SDHAP1-204ENST00000427415 FLG2Q5D862 2391 aaPredicted RBP14.16□□□□□ -0.14
SDHAP1-204ENST00000427415 IGKCP01834 107 aa14.16□□□□□ -0.14
SDHAP1-204ENST00000427415 C9orf129Q5T035 196 aaKnown RBP14.16□□□□□ -0.14
SDHAP1-204ENST00000427415 FAM19A5Q7Z5A7 132 aaPredicted RBP14.16□□□□□ -0.14
SDHAP1-204ENST00000427415 PMCHL2Q9BQD1 86 aa14.16□□□□□ -0.14
SDHAP1-204ENST00000427415 FAM168BA1KXE4 195 aa14.15□□□□□ -0.14
SDHAP1-204ENST00000427415 SYS1-DBNDD2H3BUS1 97 aa14.15□□□□□ -0.14
SDHAP1-204ENST00000427415 HERVK_113P61574 105 aa14.14□□□□□ -0.15
SDHAP1-204ENST00000427415 ZNF625Q96I27 306 aaPredicted RBP14.13□□□□□ -0.15
SDHAP1-204ENST00000427415 XAGE1AQ9HD64 81 aa14.13□□□□□ -0.15
SDHAP1-204ENST00000427415 ERG28Q9UKR5 140 aa14.13□□□□□ -0.15
SDHAP1-204ENST00000427415 PFN2P35080 140 aa14.11□□□□□ -0.15
SDHAP1-204ENST00000427415 COX17Q14061 63 aa14.11□□□□□ -0.15
SDHAP1-204ENST00000427415 PET117Q6UWS5 81 aa14.11□□□□□ -0.15
SDHAP1-204ENST00000427415 PHF5AQ7RTV0 110 aaKnown RBP14.11□□□□□ -0.15
SDHAP1-204ENST00000427415 M0QXV9 152 aa14.1□□□□□ -0.15
SDHAP1-204ENST00000427415 PRR3P79522 188 aaKnown RBP14.1□□□□□ -0.15
SDHAP1-204ENST00000427415 PLEKHB2Q96CS7 222 aa14.1□□□□□ -0.15
SDHAP1-204ENST00000427415 LEPROTO15243 131 aa14.08□□□□□ -0.16
SDHAP1-204ENST00000427415 LINC01545Q5VT33 79 aa14.08□□□□□ -0.16
SDHAP1-204ENST00000427415 C3orf79P0CE67 100 aa14.07□□□□□ -0.16
SDHAP1-204ENST00000427415 KRTDAPP60985 99 aa14.07□□□□□ -0.16
SDHAP1-204ENST00000427415 HERV-K104P63124 156 aa14.07□□□□□ -0.16
SDHAP1-204ENST00000427415 KRTAP7-1Q8IUC3 87 aa14.07□□□□□ -0.16
SDHAP1-204ENST00000427415 NDUFA12Q9UI09 145 aa14.07□□□□□ -0.16
SDHAP1-204ENST00000427415 SERTAD4-AS1Q5TG53 156 aa14.06□□□□□ -0.16
SDHAP1-204ENST00000427415 MYMXA0A1B0GTQ4 84 aa14.05□□□□□ -0.16
SDHAP1-204ENST00000427415 J3QQQ9 107 aa14.04□□□□□ -0.16
SDHAP1-204ENST00000427415 S100A6P06703 90 aa14.04□□□□□ -0.16
SDHAP1-204ENST00000427415 UBE2BP63146 152 aa14.04□□□□□ -0.16
SDHAP1-204ENST00000427415 PLA2G2DQ9UNK4 145 aa14.04□□□□□ -0.16
SDHAP1-204ENST00000427415 C20orf202A1L168 122 aa14.03□□□□□ -0.16
SDHAP1-204ENST00000427415 LGALS3P17931 250 aaKnown RBP14.03□□□□□ -0.16
SDHAP1-204ENST00000427415 LINC00158P58513 81 aa14.03□□□□□ -0.16
SDHAP1-204ENST00000427415 TSPEAR-AS2P59090 65 aa14.03□□□□□ -0.16
SDHAP1-204ENST00000427415 MEIG1Q5JSS6 88 aa14.03□□□□□ -0.16
SDHAP1-204ENST00000427415 LINC00587B1AMM8 73 aa14.02□□□□□ -0.17
SDHAP1-204ENST00000427415 HNRNPA3P51991 378 aaKnown RBP14.02□□□□□ -0.17
SDHAP1-204ENST00000427415 LBHQ53QV2 105 aaPredicted RBP14.02□□□□□ -0.17
SDHAP1-204ENST00000427415 SND1-IT1Q9HBX3 110 aa14.02□□□□□ -0.17
SDHAP1-204ENST00000427415 TP73-AS1Q9UF72 201 aa14.02□□□□□ -0.17
SDHAP1-204ENST00000427415 PKHD1L1Q86WI1 4243 aa14.01□□□□□ -0.17
SDHAP1-204ENST00000427415 S100A2P29034 98 aa14.01□□□□□ -0.17
SDHAP1-204ENST00000427415 NMUP48645 174 aa14.01□□□□□ -0.17
SDHAP1-204ENST00000427415 PSORS1C2Q9UIG4 136 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms