RNA–Protein interactions for RNA: ENST00000419249.2

AGRN-202, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 861 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-202ENST00000419249 NDUFA6P56556 154 aa11.61□□□□□ -0.55
AGRN-202ENST00000419249 LINC00310P59036 64 aa11.61□□□□□ -0.55
AGRN-202ENST00000419249 C6orf226Q5I0X4 101 aa11.61□□□□□ -0.55
AGRN-202ENST00000419249 IFI27L1Q96BM0 104 aa11.61□□□□□ -0.55
AGRN-202ENST00000419249 TRAV12-1A0A0B4J245 112 aa11.6□□□□□ -0.55
AGRN-202ENST00000419249 INAFM2P0DMQ5 153 aa11.6□□□□□ -0.55
AGRN-202ENST00000419249 CXCL5P42830 114 aa11.59□□□□□ -0.55
AGRN-202ENST00000419249 CKS1BP61024 79 aa11.59□□□□□ -0.55
AGRN-202ENST00000419249 GAGE2BQ13066 116 aa11.59□□□□□ -0.55
AGRN-202ENST00000419249 C2orf82Q6UX34 121 aa11.59□□□□□ -0.55
AGRN-202ENST00000419249 FAM19A2Q8N3H0 131 aa11.59□□□□□ -0.55
AGRN-202ENST00000419249 STPG4Q8N801 248 aa11.59□□□□□ -0.55
AGRN-202ENST00000419249 TOMM7Q9P0U1 55 aa11.59□□□□□ -0.55
AGRN-202ENST00000419249 S100A1P23297 94 aa11.58□□□□□ -0.56
AGRN-202ENST00000419249 ZNF22P17026 224 aaPredicted RBP11.57□□□□□ -0.56
AGRN-202ENST00000419249 LEPROTL1O95214 131 aa11.56□□□□□ -0.56
AGRN-202ENST00000419249 RPL18AQ02543 176 aaKnown RBP11.56□□□□□ -0.56
AGRN-202ENST00000419249 COX7B2Q8TF08 81 aa11.56□□□□□ -0.56
AGRN-202ENST00000419249 CHTOPQ9Y3Y2 248 aaKnown RBP11.56□□□□□ -0.56
AGRN-202ENST00000419249 IGLV5-39A0A0G2JS06 123 aa11.55□□□□□ -0.56
AGRN-202ENST00000419249 F8VRH5 84 aa11.55□□□□□ -0.56
AGRN-202ENST00000419249 NUPR1O60356 82 aa11.55□□□□□ -0.56
AGRN-202ENST00000419249 HIST1H2BKO60814 126 aa11.55□□□□□ -0.56
AGRN-202ENST00000419249 HIST1H2BJP06899 126 aa11.55□□□□□ -0.56
AGRN-202ENST00000419249 SPINK8P0C7L1 97 aa11.55□□□□□ -0.56
AGRN-202ENST00000419249 HIST1H2BOP23527 126 aa11.55□□□□□ -0.56
AGRN-202ENST00000419249 HIST1H2BBP33778 126 aa11.55□□□□□ -0.56
AGRN-202ENST00000419249 HIST1H2BDP58876 126 aa11.55□□□□□ -0.56
AGRN-202ENST00000419249 KRTAP10-4P60372 401 aaPredicted RBP11.55□□□□□ -0.56
AGRN-202ENST00000419249 HIST1H2BCP62807 126 aa11.55□□□□□ -0.56
AGRN-202ENST00000419249 HIST2H2BEQ16778 126 aa11.55□□□□□ -0.56
AGRN-202ENST00000419249 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.55□□□□□ -0.56
AGRN-202ENST00000419249 HIST1H2BHQ93079 126 aa11.55□□□□□ -0.56
AGRN-202ENST00000419249 HIST1H2BNQ99877 126 aa11.55□□□□□ -0.56
AGRN-202ENST00000419249 HIST1H2BMQ99879 126 aa11.55□□□□□ -0.56
AGRN-202ENST00000419249 C11orf86A6NJI1 115 aa11.54□□□□□ -0.56
AGRN-202ENST00000419249 NDUFC2-KCTD14E9PQ53 114 aa11.54□□□□□ -0.56
AGRN-202ENST00000419249 Q6ZRP5 223 aa11.54□□□□□ -0.56
AGRN-202ENST00000419249 RPL37AP61513 92 aaKnown RBP11.53□□□□□ -0.56
AGRN-202ENST00000419249 C7orf33Q8WU49 177 aa11.53□□□□□ -0.56
AGRN-202ENST00000419249 HSPB8Q9UJY1 196 aa11.53□□□□□ -0.56
AGRN-202ENST00000419249 MYCBP2O75592 4640 aa11.52□□□□□ -0.57
AGRN-202ENST00000419249 A0A1W2PNN7 141 aa11.51□□□□□ -0.57
AGRN-202ENST00000419249 C9orf116Q5BN46 136 aaPredicted RBP11.51□□□□□ -0.57
AGRN-202ENST00000419249 PKHD1L1Q86WI1 4243 aa11.51□□□□□ -0.57
AGRN-202ENST00000419249 ATP6V1G1O75348 118 aa11.5□□□□□ -0.57
AGRN-202ENST00000419249 TMEM170BQ5T4T1 132 aa11.5□□□□□ -0.57
AGRN-202ENST00000419249 ODF1Q14990 250 aa11.49□□□□□ -0.57
AGRN-202ENST00000419249 GAGE2EQ4V326 116 aa11.49□□□□□ -0.57
AGRN-202ENST00000419249 GAGE2DQ9UEU5 116 aa11.49□□□□□ -0.57
AGRN-202ENST00000419249 FLG2Q5D862 2391 aaPredicted RBP11.48□□□□□ -0.57
AGRN-202ENST00000419249 COA6Q5JTJ3 125 aaKnown RBP11.48□□□□□ -0.57
AGRN-202ENST00000419249 TMEM223A0PJW6 202 aa11.47□□□□□ -0.57
AGRN-202ENST00000419249 SFTA2Q6UW10 78 aa11.47□□□□□ -0.57
AGRN-202ENST00000419249 FABP4P15090 132 aa11.46□□□□□ -0.57
AGRN-202ENST00000419249 C9orf129Q5T035 196 aaKnown RBP11.45□□□□□ -0.58
AGRN-202ENST00000419249 MAP1LC3CQ9BXW4 147 aa11.44□□□□□ -0.58
AGRN-202ENST00000419249 PLNP26678 52 aa11.43□□□□□ -0.58
AGRN-202ENST00000419249 H0Y8G0 127 aa11.42□□□□□ -0.58
AGRN-202ENST00000419249 FAM168BA1KXE4 195 aa11.41□□□□□ -0.58
AGRN-202ENST00000419249 PRR3P79522 188 aaKnown RBP11.41□□□□□ -0.58
AGRN-202ENST00000419249 KRTAP7-1Q8IUC3 87 aa11.41□□□□□ -0.58
AGRN-202ENST00000419249 ZNF625Q96I27 306 aaPredicted RBP11.41□□□□□ -0.58
AGRN-202ENST00000419249 DPM2O94777 84 aa11.4□□□□□ -0.58
AGRN-202ENST00000419249 COX17Q14061 63 aa11.4□□□□□ -0.58
AGRN-202ENST00000419249 PHF5AQ7RTV0 110 aaKnown RBP11.39□□□□□ -0.59
AGRN-202ENST00000419249 XAGE1AQ9HD64 81 aa11.39□□□□□ -0.59
AGRN-202ENST00000419249 SYS1-DBNDD2H3BUS1 97 aa11.38□□□□□ -0.59
AGRN-202ENST00000419249 IGKCP01834 107 aa11.38□□□□□ -0.59
AGRN-202ENST00000419249 FAM19A5Q7Z5A7 132 aaPredicted RBP11.38□□□□□ -0.59
AGRN-202ENST00000419249 ERG28Q9UKR5 140 aa11.38□□□□□ -0.59
AGRN-202ENST00000419249 PLA2G2DQ9UNK4 145 aa11.38□□□□□ -0.59
AGRN-202ENST00000419249 HNRNPA3P51991 378 aaKnown RBP11.37□□□□□ -0.59
AGRN-202ENST00000419249 HERC1Q15751 4861 aa11.37□□□□□ -0.59
AGRN-202ENST00000419249 DMBT1Q9UGM3 2413 aaPredicted RBP11.37□□□□□ -0.59
AGRN-202ENST00000419249 FAT3Q8TDW7 4589 aa11.36□□□□□ -0.59
AGRN-202ENST00000419249 M0QXV9 152 aa11.36□□□□□ -0.59
AGRN-202ENST00000419249 PET117Q6UWS5 81 aa11.35□□□□□ -0.59
AGRN-202ENST00000419249 TP73-AS1Q9UF72 201 aa11.35□□□□□ -0.59
AGRN-202ENST00000419249 KRTAP29-1A8MX34 341 aaPredicted RBP11.34□□□□□ -0.59
AGRN-202ENST00000419249 LEPROTO15243 131 aa11.34□□□□□ -0.59
AGRN-202ENST00000419249 PFN2P35080 140 aa11.34□□□□□ -0.59
AGRN-202ENST00000419249 HERVK_113P61574 105 aa11.34□□□□□ -0.59
AGRN-202ENST00000419249 HERV-K104P63124 156 aa11.34□□□□□ -0.59
AGRN-202ENST00000419249 SERTAD4-AS1Q5TG53 156 aa11.34□□□□□ -0.59
AGRN-202ENST00000419249 PLEKHB2Q96CS7 222 aa11.34□□□□□ -0.59
AGRN-202ENST00000419249 PMCHL2Q9BQD1 86 aa11.34□□□□□ -0.59
AGRN-202ENST00000419249 PSORS1C2Q9UIG4 136 aa11.34□□□□□ -0.59
AGRN-202ENST00000419249 LRP1Q07954 4544 aaKnown RBP11.33□□□□□ -0.6
AGRN-202ENST00000419249 LINC01545Q5VT33 79 aa11.33□□□□□ -0.6
AGRN-202ENST00000419249 C22orf24Q9Y442 160 aa11.33□□□□□ -0.6
AGRN-202ENST00000419249 IGLV5-37A0A075B6J1 123 aa11.32□□□□□ -0.6
AGRN-202ENST00000419249 OXTP01178 125 aa11.32□□□□□ -0.6
AGRN-202ENST00000419249 LBHQ53QV2 105 aaPredicted RBP11.32□□□□□ -0.6
AGRN-202ENST00000419249 NDUFA12Q9UI09 145 aa11.32□□□□□ -0.6
AGRN-202ENST00000419249 MYMXA0A1B0GTQ4 84 aa11.31□□□□□ -0.6
AGRN-202ENST00000419249 LINC00587B1AMM8 73 aa11.31□□□□□ -0.6
AGRN-202ENST00000419249 C3orf79P0CE67 100 aa11.31□□□□□ -0.6
AGRN-202ENST00000419249 SRSF9Q13242 221 aaKnown RBP eCLIP11.31□□□□□ -0.6
AGRN-202ENST00000419249 SND1-IT1Q9HBX3 110 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms