RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 CKS1BP61024 79 aa10.52□□□□□ -0.73
LINC00398-201ENST00000414407 SCXQ7RTU7 201 aa10.52□□□□□ -0.73
LINC00398-201ENST00000414407 CIRBP-AS1Q8TBR5 109 aa10.52□□□□□ -0.73
LINC00398-201ENST00000414407 SPACA4Q8TDM5 124 aa10.52□□□□□ -0.73
LINC00398-201ENST00000414407 PANO1I0J062 215 aa10.51□□□□□ -0.73
LINC00398-201ENST00000414407 SPINK8P0C7L1 97 aa10.51□□□□□ -0.73
LINC00398-201ENST00000414407 ODF1Q14990 250 aa10.51□□□□□ -0.73
LINC00398-201ENST00000414407 C10orf25Q5T742 122 aa10.51□□□□□ -0.73
LINC00398-201ENST00000414407 Q8N1X5 172 aa10.51□□□□□ -0.73
LINC00398-201ENST00000414407 COX7B2Q8TF08 81 aa10.51□□□□□ -0.73
LINC00398-201ENST00000414407 IGLV5-39A0A0G2JS06 123 aa10.5□□□□□ -0.73
LINC00398-201ENST00000414407 TLX1NBP0CAT3 122 aa10.5□□□□□ -0.73
LINC00398-201ENST00000414407 HAMPP81172 84 aa10.5□□□□□ -0.73
LINC00398-201ENST00000414407 TMEM170BQ5T4T1 132 aa10.5□□□□□ -0.73
LINC00398-201ENST00000414407 C2orf82Q6UX34 121 aa10.5□□□□□ -0.73
LINC00398-201ENST00000414407 C6orf48Q9UBA6 75 aa10.5□□□□□ -0.73
LINC00398-201ENST00000414407 A0A096LNI7 61 aa10.49□□□□□ -0.73
LINC00398-201ENST00000414407 MAP1LC3CQ9BXW4 147 aa10.49□□□□□ -0.73
LINC00398-201ENST00000414407 CHTF8P0CG12 524 aa10.48□□□□□ -0.73
LINC00398-201ENST00000414407 PTTG1IPP53801 180 aa10.48□□□□□ -0.73
LINC00398-201ENST00000414407 DPH3Q96FX2 82 aa10.48□□□□□ -0.73
LINC00398-201ENST00000414407 IGKV2-24A0A0C4DH68 120 aa10.47□□□□□ -0.73
LINC00398-201ENST00000414407 H0Y8G0 127 aa10.47□□□□□ -0.73
LINC00398-201ENST00000414407 PLNP26678 52 aa10.47□□□□□ -0.73
LINC00398-201ENST00000414407 MAJINQ3KP22 176 aa10.47□□□□□ -0.73
LINC00398-201ENST00000414407 PLAC8Q9NZF1 115 aa10.47□□□□□ -0.73
LINC00398-201ENST00000414407 A0A087WYN8 130 aa10.46□□□□□ -0.73
LINC00398-201ENST00000414407 TMEM223A0PJW6 202 aa10.46□□□□□ -0.73
LINC00398-201ENST00000414407 GAGE2BQ13066 116 aa10.46□□□□□ -0.73
LINC00398-201ENST00000414407 NDUFC2-KCTD14E9PQ53 114 aa10.45□□□□□ -0.74
LINC00398-201ENST00000414407 SMR3BP02814 79 aaPredicted RBP10.45□□□□□ -0.74
LINC00398-201ENST00000414407 RPL18AQ02543 176 aaKnown RBP10.45□□□□□ -0.74
LINC00398-201ENST00000414407 KRTAP17-1Q9BYP8 105 aa10.45□□□□□ -0.74
LINC00398-201ENST00000414407 FAM229AH3BQW9 127 aa10.44□□□□□ -0.74
LINC00398-201ENST00000414407 SYS1-DBNDD2H3BUS1 97 aa10.44□□□□□ -0.74
LINC00398-201ENST00000414407 DPM2O94777 84 aa10.44□□□□□ -0.74
LINC00398-201ENST00000414407 SFTA2Q6UW10 78 aa10.44□□□□□ -0.74
LINC00398-201ENST00000414407 Q6ZRP5 223 aa10.44□□□□□ -0.74
LINC00398-201ENST00000414407 STPG4Q8N801 248 aa10.43□□□□□ -0.74
LINC00398-201ENST00000414407 EPM2AB3EWF7 344 aa10.42□□□□□ -0.74
LINC00398-201ENST00000414407 IGKCP01834 107 aa10.42□□□□□ -0.74
LINC00398-201ENST00000414407 C9orf116Q5BN46 136 aaPredicted RBP10.42□□□□□ -0.74
LINC00398-201ENST00000414407 PET117Q6UWS5 81 aa10.42□□□□□ -0.74
LINC00398-201ENST00000414407 LINC00528Q8N1L1 170 aa10.41□□□□□ -0.74
LINC00398-201ENST00000414407 Q5VSD8 79 aa10.4□□□□□ -0.74
LINC00398-201ENST00000414407 LINC01545Q5VT33 79 aa10.4□□□□□ -0.74
LINC00398-201ENST00000414407 PMCHL2Q9BQD1 86 aa10.4□□□□□ -0.74
LINC00398-201ENST00000414407 FAT1Q14517 4588 aa10.39□□□□□ -0.75
LINC00398-201ENST00000414407 S100A6P06703 90 aa10.39□□□□□ -0.75
LINC00398-201ENST00000414407 C3orf79P0CE67 100 aa10.39□□□□□ -0.75
LINC00398-201ENST00000414407 ZNF625Q96I27 306 aaPredicted RBP10.39□□□□□ -0.75
LINC00398-201ENST00000414407 HERVK_113P61574 105 aa10.38□□□□□ -0.75
LINC00398-201ENST00000414407 GAGE2EQ4V326 116 aa10.38□□□□□ -0.75
LINC00398-201ENST00000414407 HIST3H2BBQ8N257 126 aa10.38□□□□□ -0.75
LINC00398-201ENST00000414407 KRTAP3-3Q9BYR6 98 aa10.38□□□□□ -0.75
LINC00398-201ENST00000414407 KRTAP3-2Q9BYR7 98 aa10.38□□□□□ -0.75
LINC00398-201ENST00000414407 GAGE2DQ9UEU5 116 aa10.38□□□□□ -0.75
LINC00398-201ENST00000414407 PLA2G1BP04054 148 aaKnown RBP10.37□□□□□ -0.75
LINC00398-201ENST00000414407 A0A1W2PNN7 141 aa10.36□□□□□ -0.75
LINC00398-201ENST00000414407 KRTDAPP60985 99 aa10.36□□□□□ -0.75
LINC00398-201ENST00000414407 COX17Q14061 63 aa10.36□□□□□ -0.75
LINC00398-201ENST00000414407 PLEKHB2Q96CS7 222 aa10.36□□□□□ -0.75
LINC00398-201ENST00000414407 KRTAP4-5Q9BYR2 181 aa10.36□□□□□ -0.75
LINC00398-201ENST00000414407 LEPROTO15243 131 aa10.35□□□□□ -0.75
LINC00398-201ENST00000414407 S100A2P29034 98 aa10.35□□□□□ -0.75
LINC00398-201ENST00000414407 C9orf129Q5T035 196 aaKnown RBP10.35□□□□□ -0.75
LINC00398-201ENST00000414407 C7orf33Q8WU49 177 aa10.35□□□□□ -0.75
LINC00398-201ENST00000414407 C20orf202A1L168 122 aa10.34□□□□□ -0.75
LINC00398-201ENST00000414407 AKR1D1P51857 326 aa10.34□□□□□ -0.75
LINC00398-201ENST00000414407 HERV-K104P63124 156 aa10.34□□□□□ -0.75
LINC00398-201ENST00000414407 HIST1H2BLQ99880 126 aa10.34□□□□□ -0.75
LINC00398-201ENST00000414407 ERG28Q9UKR5 140 aa10.34□□□□□ -0.75
LINC00398-201ENST00000414407 ABCA13Q86UQ4 5058 aa10.33□□□□□ -0.76
LINC00398-201ENST00000414407 MYMXA0A1B0GTQ4 84 aa10.32□□□□□ -0.76
LINC00398-201ENST00000414407 J3QQQ9 107 aa10.32□□□□□ -0.76
LINC00398-201ENST00000414407 RPL37AP61513 92 aaKnown RBP10.32□□□□□ -0.76
LINC00398-201ENST00000414407 NDUFA12Q9UI09 145 aa10.32□□□□□ -0.76
LINC00398-201ENST00000414407 PCLOQ9Y6V0 5065 aa10.31□□□□□ -0.76
LINC00398-201ENST00000414407 FAM168BA1KXE4 195 aa10.31□□□□□ -0.76
LINC00398-201ENST00000414407 C5orf52A6NGY3 159 aa10.31□□□□□ -0.76
LINC00398-201ENST00000414407 LINC00587B1AMM8 73 aa10.31□□□□□ -0.76
LINC00398-201ENST00000414407 E9PLD3 99 aa10.31□□□□□ -0.76
LINC00398-201ENST00000414407 PFN2P35080 140 aa10.31□□□□□ -0.76
LINC00398-201ENST00000414407 NMUP48645 174 aa10.31□□□□□ -0.76
LINC00398-201ENST00000414407 KRTAP10-4P60372 401 aaPredicted RBP10.31□□□□□ -0.76
LINC00398-201ENST00000414407 SNRPEP62304 92 aaKnown RBP10.31□□□□□ -0.76
LINC00398-201ENST00000414407 XAGE1AQ9HD64 81 aa10.31□□□□□ -0.76
LINC00398-201ENST00000414407 TSPEAR-AS2P59090 65 aa10.3□□□□□ -0.76
LINC00398-201ENST00000414407 LGALS3P17931 250 aaKnown RBP10.29□□□□□ -0.76
LINC00398-201ENST00000414407 FAM19A5Q7Z5A7 132 aaPredicted RBP10.29□□□□□ -0.76
LINC00398-201ENST00000414407 KRTAP7-1Q8IUC3 87 aa10.29□□□□□ -0.76
LINC00398-201ENST00000414407 PLA2G2DQ9UNK4 145 aa10.29□□□□□ -0.76
LINC00398-201ENST00000414407 LINC00158P58513 81 aa10.27□□□□□ -0.77
LINC00398-201ENST00000414407 SND1-IT1Q9HBX3 110 aa10.27□□□□□ -0.77
LINC00398-201ENST00000414407 VPS13BQ7Z7G8 4022 aa10.27□□□□□ -0.77
LINC00398-201ENST00000414407 M0QXV9 152 aa10.26□□□□□ -0.77
LINC00398-201ENST00000414407 MEIG1Q5JSS6 88 aa10.26□□□□□ -0.77
LINC00398-201ENST00000414407 SERTAD4-AS1Q5TG53 156 aa10.26□□□□□ -0.77
LINC00398-201ENST00000414407 PHF5AQ7RTV0 110 aaKnown RBP10.26□□□□□ -0.77
LINC00398-201ENST00000414407 TP73-AS1Q9UF72 201 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms