RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 C6orf48Q9UBA6 75 aa8.86□□□□□ -0.99
GYPC-203ENST00000409836 IGLV5-39A0A0G2JS06 123 aa8.85□□□□□ -0.99
GYPC-203ENST00000409836 CXCL5P42830 114 aa8.85□□□□□ -0.99
GYPC-203ENST00000409836 C10orf25Q5T742 122 aa8.85□□□□□ -0.99
GYPC-203ENST00000409836 IFI27L1Q96BM0 104 aa8.85□□□□□ -0.99
GYPC-203ENST00000409836 HIST1H2BKO60814 126 aa8.84□□□□□ -0.99
GYPC-203ENST00000409836 HIST1H2BJP06899 126 aa8.84□□□□□ -0.99
GYPC-203ENST00000409836 ZNF22P17026 224 aaPredicted RBP8.84□□□□□ -0.99
GYPC-203ENST00000409836 HIST1H2BOP23527 126 aa8.84□□□□□ -0.99
GYPC-203ENST00000409836 HIST1H2BBP33778 126 aa8.84□□□□□ -0.99
GYPC-203ENST00000409836 HIST1H2BDP58876 126 aa8.84□□□□□ -0.99
GYPC-203ENST00000409836 HIST1H2BCP62807 126 aa8.84□□□□□ -0.99
GYPC-203ENST00000409836 HIST2H2BEQ16778 126 aa8.84□□□□□ -0.99
GYPC-203ENST00000409836 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.84□□□□□ -0.99
GYPC-203ENST00000409836 UNQ6190/PRO20217Q6UXQ8 127 aa8.84□□□□□ -0.99
GYPC-203ENST00000409836 HIST1H2BHQ93079 126 aa8.84□□□□□ -0.99
GYPC-203ENST00000409836 PACRGQ96M98 296 aaPredicted RBP8.84□□□□□ -0.99
GYPC-203ENST00000409836 HIST1H2BNQ99877 126 aa8.84□□□□□ -0.99
GYPC-203ENST00000409836 HIST1H2BMQ99879 126 aa8.84□□□□□ -0.99
GYPC-203ENST00000409836 H3BRM9 83 aa8.83□□□□□ -1
GYPC-203ENST00000409836 PLA2G1BP04054 148 aaKnown RBP8.83□□□□□ -1
GYPC-203ENST00000409836 IGKV2-24A0A0C4DH68 120 aa8.82□□□□□ -1
GYPC-203ENST00000409836 C11orf86A6NJI1 115 aa8.82□□□□□ -1
GYPC-203ENST00000409836 F8VRH5 84 aa8.82□□□□□ -1
GYPC-203ENST00000409836 ODF1Q14990 250 aa8.82□□□□□ -1
GYPC-203ENST00000409836 C2orf82Q6UX34 121 aa8.82□□□□□ -1
GYPC-203ENST00000409836 FLG2Q5D862 2391 aaPredicted RBP8.81□□□□□ -1
GYPC-203ENST00000409836 NDUFC2-KCTD14E9PQ53 114 aa8.81□□□□□ -1
GYPC-203ENST00000409836 PRSS2P07478 247 aa8.81□□□□□ -1
GYPC-203ENST00000409836 MAJINQ3KP22 176 aa8.81□□□□□ -1
GYPC-203ENST00000409836 COA6Q5JTJ3 125 aaKnown RBP8.81□□□□□ -1
GYPC-203ENST00000409836 FAM19A2Q8N3H0 131 aa8.81□□□□□ -1
GYPC-203ENST00000409836 NUPR1O60356 82 aa8.8□□□□□ -1
GYPC-203ENST00000409836 Q6ZRP5 223 aa8.8□□□□□ -1
GYPC-203ENST00000409836 STPG4Q8N801 248 aa8.8□□□□□ -1
GYPC-203ENST00000409836 COX7B2Q8TF08 81 aa8.8□□□□□ -1
GYPC-203ENST00000409836 LEPROTL1O95214 131 aa8.79□□□□□ -1
GYPC-203ENST00000409836 SPINK8P0C7L1 97 aa8.79□□□□□ -1
GYPC-203ENST00000409836 CKS1BP61024 79 aa8.79□□□□□ -1
GYPC-203ENST00000409836 RPL18AQ02543 176 aaKnown RBP8.79□□□□□ -1
GYPC-203ENST00000409836 C6orf226Q5I0X4 101 aa8.79□□□□□ -1
GYPC-203ENST00000409836 CHTOPQ9Y3Y2 248 aaKnown RBP8.79□□□□□ -1
GYPC-203ENST00000409836 PKHD1L1Q86WI1 4243 aa8.79□□□□□ -1
GYPC-203ENST00000409836 NDUFA6P56556 154 aa8.78□□□□□ -1
GYPC-203ENST00000409836 SFTA2Q6UW10 78 aa8.78□□□□□ -1
GYPC-203ENST00000409836 TOMM7Q9P0U1 55 aa8.78□□□□□ -1
GYPC-203ENST00000409836 HSPB8Q9UJY1 196 aa8.78□□□□□ -1
GYPC-203ENST00000409836 MYCBP2O75592 4640 aa8.78□□□□□ -1
GYPC-203ENST00000409836 RPL37AP61513 92 aaKnown RBP8.77□□□□□ -1.01
GYPC-203ENST00000409836 GAGE2BQ13066 116 aa8.77□□□□□ -1.01
GYPC-203ENST00000409836 A0A1W2PNN7 141 aa8.75□□□□□ -1.01
GYPC-203ENST00000409836 TMEM223A0PJW6 202 aa8.75□□□□□ -1.01
GYPC-203ENST00000409836 INAFM2P0DMQ5 153 aa8.75□□□□□ -1.01
GYPC-203ENST00000409836 C9orf116Q5BN46 136 aaPredicted RBP8.75□□□□□ -1.01
GYPC-203ENST00000409836 C7orf33Q8WU49 177 aa8.75□□□□□ -1.01
GYPC-203ENST00000409836 PLNP26678 52 aa8.74□□□□□ -1.01
GYPC-203ENST00000409836 TMEM170BQ5T4T1 132 aa8.74□□□□□ -1.01
GYPC-203ENST00000409836 KRTAP7-1Q8IUC3 87 aa8.74□□□□□ -1.01
GYPC-203ENST00000409836 ZNF625Q96I27 306 aaPredicted RBP8.74□□□□□ -1.01
GYPC-203ENST00000409836 DMBT1Q9UGM3 2413 aaPredicted RBP8.74□□□□□ -1.01
GYPC-203ENST00000409836 SMIM6P0DI80 62 aa8.73□□□□□ -1.01
GYPC-203ENST00000409836 PRR3P79522 188 aaKnown RBP8.73□□□□□ -1.01
GYPC-203ENST00000409836 C9orf129Q5T035 196 aaKnown RBP8.73□□□□□ -1.01
GYPC-203ENST00000409836 DPH3Q96FX2 82 aa8.73□□□□□ -1.01
GYPC-203ENST00000409836 PCP4L1A6NKN8 68 aa8.72□□□□□ -1.01
GYPC-203ENST00000409836 C12orf57Q99622 126 aa8.72□□□□□ -1.01
GYPC-203ENST00000409836 COX17Q14061 63 aa8.7□□□□□ -1.02
GYPC-203ENST00000409836 GAGE2EQ4V326 116 aa8.7□□□□□ -1.02
GYPC-203ENST00000409836 MAP1LC3CQ9BXW4 147 aa8.7□□□□□ -1.02
GYPC-203ENST00000409836 GAGE2DQ9UEU5 116 aa8.7□□□□□ -1.02
GYPC-203ENST00000409836 FAM168BA1KXE4 195 aa8.69□□□□□ -1.02
GYPC-203ENST00000409836 DPM2O94777 84 aa8.69□□□□□ -1.02
GYPC-203ENST00000409836 FABP4P15090 132 aa8.69□□□□□ -1.02
GYPC-203ENST00000409836 HNRNPA3P51991 378 aaKnown RBP8.69□□□□□ -1.02
GYPC-203ENST00000409836 TP73-AS1Q9UF72 201 aa8.69□□□□□ -1.02
GYPC-203ENST00000409836 PLA2G2DQ9UNK4 145 aa8.69□□□□□ -1.02
GYPC-203ENST00000409836 SYS1-DBNDD2H3BUS1 97 aa8.68□□□□□ -1.02
GYPC-203ENST00000409836 LBHQ53QV2 105 aaPredicted RBP8.68□□□□□ -1.02
GYPC-203ENST00000409836 LINC01545Q5VT33 79 aa8.68□□□□□ -1.02
GYPC-203ENST00000409836 IGLV5-37A0A075B6J1 123 aa8.67□□□□□ -1.02
GYPC-203ENST00000409836 M0QXV9 152 aa8.67□□□□□ -1.02
GYPC-203ENST00000409836 ERG28Q9UKR5 140 aa8.67□□□□□ -1.02
GYPC-203ENST00000409836 H0Y8G0 127 aa8.66□□□□□ -1.02
GYPC-203ENST00000409836 IGKCP01834 107 aa8.66□□□□□ -1.02
GYPC-203ENST00000409836 FAM19A5Q7Z5A7 132 aaPredicted RBP8.66□□□□□ -1.02
GYPC-203ENST00000409836 XAGE1AQ9HD64 81 aa8.66□□□□□ -1.02
GYPC-203ENST00000409836 KRTAP29-1A8MX34 341 aaPredicted RBP8.65□□□□□ -1.02
GYPC-203ENST00000409836 HERV-K104P63124 156 aa8.65□□□□□ -1.02
GYPC-203ENST00000409836 SERTAD4-AS1Q5TG53 156 aa8.65□□□□□ -1.02
GYPC-203ENST00000409836 PET117Q6UWS5 81 aa8.65□□□□□ -1.02
GYPC-203ENST00000409836 PHF5AQ7RTV0 110 aaKnown RBP8.65□□□□□ -1.02
GYPC-203ENST00000409836 AKR1D1P51857 326 aa8.64□□□□□ -1.03
GYPC-203ENST00000409836 TSPEAR-AS2P59090 65 aa8.64□□□□□ -1.03
GYPC-203ENST00000409836 PLEKHB2Q96CS7 222 aa8.64□□□□□ -1.03
GYPC-203ENST00000409836 PSORS1C2Q9UIG4 136 aa8.64□□□□□ -1.03
GYPC-203ENST00000409836 LEPROTO15243 131 aa8.63□□□□□ -1.03
GYPC-203ENST00000409836 HERVK_113P61574 105 aa8.63□□□□□ -1.03
GYPC-203ENST00000409836 KRTAP11-1Q8IUC1 163 aa8.63□□□□□ -1.03
GYPC-203ENST00000409836 PMCHL2Q9BQD1 86 aa8.63□□□□□ -1.03
GYPC-203ENST00000409836 SND1-IT1Q9HBX3 110 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms