RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 HERV-K104P63124 156 aa8.49□□□□□ -1.05
LIMS2-203ENST00000409254 SYCNQ0VAF6 134 aa8.49□□□□□ -1.05
LIMS2-203ENST00000409254 HIGD2BQ4VC39 106 aa8.49□□□□□ -1.05
LIMS2-203ENST00000409254 CARD19Q96LW7 228 aa8.49□□□□□ -1.05
LIMS2-203ENST00000409254 CAMK2N2Q96S95 79 aa8.49□□□□□ -1.05
LIMS2-203ENST00000409254 J3QQQ9 107 aa8.48□□□□□ -1.05
LIMS2-203ENST00000409254 C9orf163Q8N9P6 203 aa8.48□□□□□ -1.05
LIMS2-203ENST00000409254 ZNF625Q96I27 306 aaPredicted RBP8.48□□□□□ -1.05
LIMS2-203ENST00000409254 TOMM7Q9P0U1 55 aa8.48□□□□□ -1.05
LIMS2-203ENST00000409254 LINC00587B1AMM8 73 aa8.47□□□□□ -1.05
LIMS2-203ENST00000409254 DNAH5Q8TE73 4624 aa8.47□□□□□ -1.05
LIMS2-203ENST00000409254 MYMXA0A1B0GTQ4 84 aa8.46□□□□□ -1.06
LIMS2-203ENST00000409254 TLX1NBP0CAT3 122 aa8.46□□□□□ -1.06
LIMS2-203ENST00000409254 LGALS3P17931 250 aaKnown RBP8.46□□□□□ -1.06
LIMS2-203ENST00000409254 COX17Q14061 63 aa8.46□□□□□ -1.06
LIMS2-203ENST00000409254 PYY3Q5JQD4 70 aa8.46□□□□□ -1.06
LIMS2-203ENST00000409254 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.45□□□□□ -1.06
LIMS2-203ENST00000409254 IGLV5-52A0A0A0MRZ9 124 aa8.45□□□□□ -1.06
LIMS2-203ENST00000409254 SLPIP03973 132 aa8.45□□□□□ -1.06
LIMS2-203ENST00000409254 SMIM6P0DI80 62 aa8.45□□□□□ -1.06
LIMS2-203ENST00000409254 Q6ZRU5 148 aa8.45□□□□□ -1.06
LIMS2-203ENST00000409254 STPG4Q8N801 248 aa8.45□□□□□ -1.06
LIMS2-203ENST00000409254 NDUFA12Q9UI09 145 aa8.45□□□□□ -1.06
LIMS2-203ENST00000409254 ATOH7Q8N100 152 aa8.44□□□□□ -1.06
LIMS2-203ENST00000409254 TSPEAR-AS2P59090 65 aa8.43□□□□□ -1.06
LIMS2-203ENST00000409254 UNQ6190/PRO20217Q6UXQ8 127 aa8.43□□□□□ -1.06
LIMS2-203ENST00000409254 VAMP8Q9BV40 100 aa8.43□□□□□ -1.06
LIMS2-203ENST00000409254 LINC00474Q9P2X8 69 aa8.43□□□□□ -1.06
LIMS2-203ENST00000409254 C6orf48Q9UBA6 75 aa8.43□□□□□ -1.06
LIMS2-203ENST00000409254 LOC107984640A0A0U1RRK4 108 aa8.42□□□□□ -1.06
LIMS2-203ENST00000409254 NDUFC2-KCTD14E9PQ53 114 aa8.42□□□□□ -1.06
LIMS2-203ENST00000409254 KRTAP10-2P60368 255 aa8.42□□□□□ -1.06
LIMS2-203ENST00000409254 ANKRD39Q53RE8 183 aa8.42□□□□□ -1.06
LIMS2-203ENST00000409254 C2orf82Q6UX34 121 aa8.42□□□□□ -1.06
LIMS2-203ENST00000409254 LINC00526Q96FQ7 95 aa8.42□□□□□ -1.06
LIMS2-203ENST00000409254 IGKV2D-26A0A0A0MRZ7 120 aa8.41□□□□□ -1.06
LIMS2-203ENST00000409254 LOC105371267A0A1B0GV96 52 aa8.41□□□□□ -1.06
LIMS2-203ENST00000409254 TIMM17BO60830 172 aa8.41□□□□□ -1.06
LIMS2-203ENST00000409254 GCSHP23434 173 aa8.41□□□□□ -1.06
LIMS2-203ENST00000409254 DLEU1O43261 78 aa8.4□□□□□ -1.06
LIMS2-203ENST00000409254 S100A12P80511 92 aa8.4□□□□□ -1.06
LIMS2-203ENST00000409254 C10orf25Q5T742 122 aa8.4□□□□□ -1.06
LIMS2-203ENST00000409254 ERG28Q9UKR5 140 aa8.4□□□□□ -1.06
LIMS2-203ENST00000409254 ZNF815PA8K554 130 aa8.39□□□□□ -1.07
LIMS2-203ENST00000409254 C16orf90A8MZG2 172 aa8.39□□□□□ -1.07
LIMS2-203ENST00000409254 CIRBPQ14011 172 aaKnown RBP8.39□□□□□ -1.07
LIMS2-203ENST00000409254 SDIM1Q6ZPB5 146 aa8.39□□□□□ -1.07
LIMS2-203ENST00000409254 COX8AP10176 69 aa8.38□□□□□ -1.07
LIMS2-203ENST00000409254 Q6ZSA8 131 aa8.38□□□□□ -1.07
LIMS2-203ENST00000409254 PPDPFQ9H3Y8 114 aa8.38□□□□□ -1.07
LIMS2-203ENST00000409254 DYNC1H1Q14204 4646 aaKnown RBP8.38□□□□□ -1.07
LIMS2-203ENST00000409254 A0A0J9YXY3 114 aa8.37□□□□□ -1.07
LIMS2-203ENST00000409254 MAJINQ3KP22 176 aa8.37□□□□□ -1.07
LIMS2-203ENST00000409254 SPATA45Q537H7 98 aa8.37□□□□□ -1.07
LIMS2-203ENST00000409254 Q6ZVH6 145 aa8.37□□□□□ -1.07
LIMS2-203ENST00000409254 PAM16Q9Y3D7 125 aa8.37□□□□□ -1.07
LIMS2-203ENST00000409254 LRP1BQ9NZR2 4599 aa8.37□□□□□ -1.07
LIMS2-203ENST00000409254 DNAH8Q96JB1 4490 aa8.37□□□□□ -1.07
LIMS2-203ENST00000409254 PTTG1IPP53801 180 aa8.36□□□□□ -1.07
LIMS2-203ENST00000409254 BOD1L2Q8IYS8 172 aa8.36□□□□□ -1.07
LIMS2-203ENST00000409254 TMEM238C9JI98 176 aa8.35□□□□□ -1.07
LIMS2-203ENST00000409254 MEIG1Q5JSS6 88 aa8.35□□□□□ -1.07
LIMS2-203ENST00000409254 Q6ZRP5 223 aa8.35□□□□□ -1.07
LIMS2-203ENST00000409254 COPS9Q8WXC6 57 aa8.35□□□□□ -1.07
LIMS2-203ENST00000409254 LOC107984156A0A0G2JMH3 177 aa8.34□□□□□ -1.07
LIMS2-203ENST00000409254 RPL18AQ02543 176 aaKnown RBP8.34□□□□□ -1.07
LIMS2-203ENST00000409254 C9orf116Q5BN46 136 aaPredicted RBP8.34□□□□□ -1.07
LIMS2-203ENST00000409254 SCGB1D4Q6XE38 83 aa8.34□□□□□ -1.07
LIMS2-203ENST00000409254 PCP2Q8IVA1 136 aa8.34□□□□□ -1.07
LIMS2-203ENST00000409254 ARL17AQ8IVW1 177 aa8.34□□□□□ -1.07
LIMS2-203ENST00000409254 SPACA4Q8TDM5 124 aa8.34□□□□□ -1.07
LIMS2-203ENST00000409254 A0A096LNI7 61 aa8.33□□□□□ -1.08
LIMS2-203ENST00000409254 EPM2AB3EWF7 344 aa8.33□□□□□ -1.08
LIMS2-203ENST00000409254 SLC25A34Q6PIV7 304 aa8.33□□□□□ -1.08
LIMS2-203ENST00000409254 SPANXDQ9BXN6 97 aa8.33□□□□□ -1.08
LIMS2-203ENST00000409254 SPANXCQ9NY87 97 aa8.33□□□□□ -1.08
LIMS2-203ENST00000409254 PLA2G2DQ9UNK4 145 aa8.33□□□□□ -1.08
LIMS2-203ENST00000409254 LINC00158P58513 81 aa8.32□□□□□ -1.08
LIMS2-203ENST00000409254 LITAFQ99732 161 aa8.32□□□□□ -1.08
LIMS2-203ENST00000409254 SPANXB1Q9NS25 103 aaPredicted RBP8.32□□□□□ -1.08
LIMS2-203ENST00000409254 HIGD1BQ9P298 99 aa8.32□□□□□ -1.08
LIMS2-203ENST00000409254 SMIM13P0DJ93 91 aa8.31□□□□□ -1.08
LIMS2-203ENST00000409254 IFITM1P13164 125 aa8.31□□□□□ -1.08
LIMS2-203ENST00000409254 PFN2P35080 140 aa8.31□□□□□ -1.08
LIMS2-203ENST00000409254 KRTAP10-1P60331 282 aa8.31□□□□□ -1.08
LIMS2-203ENST00000409254 TTTY13Q9BZ97 58 aa8.31□□□□□ -1.08
LIMS2-203ENST00000409254 MIR7-3HGQ8N6C7 128 aa8.3□□□□□ -1.08
LIMS2-203ENST00000409254 MIEN1Q9BRT3 115 aa8.3□□□□□ -1.08
LIMS2-203ENST00000409254 SND1-IT1Q9HBX3 110 aa8.3□□□□□ -1.08
LIMS2-203ENST00000409254 IGLV5-37A0A075B6J1 123 aa8.29□□□□□ -1.08
LIMS2-203ENST00000409254 GAGE2BQ13066 116 aa8.29□□□□□ -1.08
LIMS2-203ENST00000409254 PLAC8Q9NZF1 115 aa8.29□□□□□ -1.08
LIMS2-203ENST00000409254 TP73-AS1Q9UF72 201 aa8.29□□□□□ -1.08
LIMS2-203ENST00000409254 CDK2AP2O75956 126 aa8.28□□□□□ -1.08
LIMS2-203ENST00000409254 NDUFC2O95298 119 aa8.28□□□□□ -1.08
LIMS2-203ENST00000409254 LINC01620Q4KN68 170 aa8.28□□□□□ -1.08
LIMS2-203ENST00000409254 C14orf144Q96I85 54 aa8.28□□□□□ -1.08
LIMS2-203ENST00000409254 C12orf57Q99622 126 aa8.28□□□□□ -1.08
LIMS2-203ENST00000409254 UQCR10Q9UDW1 63 aa8.28□□□□□ -1.08
LIMS2-203ENST00000409254 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms