RNA–Protein interactions for RNA: ENST00000409127.1

CCDC115-202, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2 BASIC

Gene CCDC115, Length 1,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-202ENST00000409127 C6orf48Q9UBA6 75 aa13.86□□□□□ -0.19
CCDC115-202ENST00000409127 TLX1NBP0CAT3 122 aa13.85□□□□□ -0.19
CCDC115-202ENST00000409127 C2orf82Q6UX34 121 aa13.85□□□□□ -0.19
CCDC115-202ENST00000409127 IGLC3P0DOY3 106 aa13.84□□□□□ -0.19
CCDC115-202ENST00000409127 IFI27L1Q96BM0 104 aa13.83□□□□□ -0.2
CCDC115-202ENST00000409127 SMIM1B2RUZ4 78 aa13.82□□□□□ -0.2
CCDC115-202ENST00000409127 COX7B2Q8TF08 81 aa13.82□□□□□ -0.2
CCDC115-202ENST00000409127 F8VRH5 84 aa13.81□□□□□ -0.2
CCDC115-202ENST00000409127 NDUFC2-KCTD14E9PQ53 114 aa13.8□□□□□ -0.2
CCDC115-202ENST00000409127 SPINK8P0C7L1 97 aa13.8□□□□□ -0.2
CCDC115-202ENST00000409127 CHTOPQ9Y3Y2 248 aaKnown RBP13.8□□□□□ -0.2
CCDC115-202ENST00000409127 PCLOQ9Y6V0 5065 aa13.8□□□□□ -0.2
CCDC115-202ENST00000409127 SRRM2Q9UQ35 2752 aaKnown RBP13.79□□□□□ -0.2
CCDC115-202ENST00000409127 ABCA13Q86UQ4 5058 aa13.79□□□□□ -0.2
CCDC115-202ENST00000409127 TRAV12-1A0A0B4J245 112 aa13.79□□□□□ -0.2
CCDC115-202ENST00000409127 SCO1O75880 301 aa13.79□□□□□ -0.2
CCDC115-202ENST00000409127 GAGE2EQ4V326 116 aa13.79□□□□□ -0.2
CCDC115-202ENST00000409127 Q6ZRP5 223 aa13.79□□□□□ -0.2
CCDC115-202ENST00000409127 FAM19A2Q8N3H0 131 aa13.79□□□□□ -0.2
CCDC115-202ENST00000409127 GAGE2DQ9UEU5 116 aa13.79□□□□□ -0.2
CCDC115-202ENST00000409127 SERF1AO75920 110 aa13.78□□□□□ -0.2
CCDC115-202ENST00000409127 C9orf116Q5BN46 136 aaPredicted RBP13.78□□□□□ -0.2
CCDC115-202ENST00000409127 LEPROTL1O95214 131 aa13.77□□□□□ -0.21
CCDC115-202ENST00000409127 TMEM170BQ5T4T1 132 aa13.77□□□□□ -0.21
CCDC115-202ENST00000409127 HSPB8Q9UJY1 196 aa13.77□□□□□ -0.21
CCDC115-202ENST00000409127 A0A1W2PNN7 141 aa13.75□□□□□ -0.21
CCDC115-202ENST00000409127 ZNF22P17026 224 aaPredicted RBP13.75□□□□□ -0.21
CCDC115-202ENST00000409127 VPS13BQ7Z7G8 4022 aa13.74□□□□□ -0.21
CCDC115-202ENST00000409127 KRTAP10-4P60372 401 aaPredicted RBP13.74□□□□□ -0.21
CCDC115-202ENST00000409127 C11orf86A6NJI1 115 aa13.73□□□□□ -0.21
CCDC115-202ENST00000409127 IGLV5-39A0A0G2JS06 123 aa13.72□□□□□ -0.21
CCDC115-202ENST00000409127 SFTA2Q6UW10 78 aa13.72□□□□□ -0.21
CCDC115-202ENST00000409127 S100A1P23297 94 aa13.7□□□□□ -0.22
CCDC115-202ENST00000409127 H0Y8G0 127 aa13.69□□□□□ -0.22
CCDC115-202ENST00000409127 LINC00310P59036 64 aa13.69□□□□□ -0.22
CCDC115-202ENST00000409127 HIST1H2BKO60814 126 aa13.68□□□□□ -0.22
CCDC115-202ENST00000409127 HIST1H2BJP06899 126 aa13.68□□□□□ -0.22
CCDC115-202ENST00000409127 FABP4P15090 132 aa13.68□□□□□ -0.22
CCDC115-202ENST00000409127 HIST1H2BOP23527 126 aa13.68□□□□□ -0.22
CCDC115-202ENST00000409127 HIST1H2BBP33778 126 aa13.68□□□□□ -0.22
CCDC115-202ENST00000409127 HIST1H2BDP58876 126 aa13.68□□□□□ -0.22
CCDC115-202ENST00000409127 HIST1H2BCP62807 126 aa13.68□□□□□ -0.22
CCDC115-202ENST00000409127 HIST2H2BEQ16778 126 aa13.68□□□□□ -0.22
CCDC115-202ENST00000409127 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.68□□□□□ -0.22
CCDC115-202ENST00000409127 HIST1H2BHQ93079 126 aa13.68□□□□□ -0.22
CCDC115-202ENST00000409127 HIST1H2BNQ99877 126 aa13.68□□□□□ -0.22
CCDC115-202ENST00000409127 HIST1H2BMQ99879 126 aa13.68□□□□□ -0.22
CCDC115-202ENST00000409127 NUPR1O60356 82 aa13.67□□□□□ -0.22
CCDC115-202ENST00000409127 PRR3P79522 188 aaKnown RBP13.67□□□□□ -0.22
CCDC115-202ENST00000409127 FAM19A5Q7Z5A7 132 aaPredicted RBP13.67□□□□□ -0.22
CCDC115-202ENST00000409127 MAP1LC3CQ9BXW4 147 aa13.66□□□□□ -0.22
CCDC115-202ENST00000409127 FAM168BA1KXE4 195 aa13.65□□□□□ -0.22
CCDC115-202ENST00000409127 C9orf129Q5T035 196 aaKnown RBP13.65□□□□□ -0.22
CCDC115-202ENST00000409127 PHF5AQ7RTV0 110 aaKnown RBP13.65□□□□□ -0.22
CCDC115-202ENST00000409127 TMEM223A0PJW6 202 aa13.64□□□□□ -0.23
CCDC115-202ENST00000409127 PLNP26678 52 aa13.64□□□□□ -0.23
CCDC115-202ENST00000409127 ODF1Q14990 250 aa13.64□□□□□ -0.23
CCDC115-202ENST00000409127 XAGE1AQ9HD64 81 aa13.64□□□□□ -0.23
CCDC115-202ENST00000409127 J3QL48 77 aa13.63□□□□□ -0.23
CCDC115-202ENST00000409127 M0QXV9 152 aa13.62□□□□□ -0.23
CCDC115-202ENST00000409127 COX17Q14061 63 aa13.62□□□□□ -0.23
CCDC115-202ENST00000409127 OXTP01178 125 aa13.61□□□□□ -0.23
CCDC115-202ENST00000409127 UBE2BP63146 152 aa13.61□□□□□ -0.23
CCDC115-202ENST00000409127 LBHQ53QV2 105 aaPredicted RBP13.61□□□□□ -0.23
CCDC115-202ENST00000409127 KRTAP29-1A8MX34 341 aaPredicted RBP13.6□□□□□ -0.23
CCDC115-202ENST00000409127 DPM2O94777 84 aa13.6□□□□□ -0.23
CCDC115-202ENST00000409127 PFN2P35080 140 aa13.6□□□□□ -0.23
CCDC115-202ENST00000409127 ERG28Q9UKR5 140 aa13.59□□□□□ -0.23
CCDC115-202ENST00000409127 HNRNPA3P51991 378 aaKnown RBP13.58□□□□□ -0.24
CCDC115-202ENST00000409127 PSORS1C2Q9UIG4 136 aa13.58□□□□□ -0.24
CCDC115-202ENST00000409127 FLG2Q5D862 2391 aaPredicted RBP13.58□□□□□ -0.24
CCDC115-202ENST00000409127 HERVK_113P61574 105 aa13.57□□□□□ -0.24
CCDC115-202ENST00000409127 SPINK6Q6UWN8 80 aa13.57□□□□□ -0.24
CCDC115-202ENST00000409127 ZNF625Q96I27 306 aaPredicted RBP13.57□□□□□ -0.24
CCDC115-202ENST00000409127 C22orf24Q9Y442 160 aa13.57□□□□□ -0.24
CCDC115-202ENST00000409127 IGKCP01834 107 aa13.56□□□□□ -0.24
CCDC115-202ENST00000409127 C1orf137Q5JT78 98 aa13.56□□□□□ -0.24
CCDC115-202ENST00000409127 PLA2G2DQ9UNK4 145 aa13.56□□□□□ -0.24
CCDC115-202ENST00000409127 LINC00587B1AMM8 73 aa13.55□□□□□ -0.24
CCDC115-202ENST00000409127 ATP6V1G1O75348 118 aa13.55□□□□□ -0.24
CCDC115-202ENST00000409127 TP73-AS1Q9UF72 201 aa13.55□□□□□ -0.24
CCDC115-202ENST00000409127 HERV-K104P63124 156 aa13.54□□□□□ -0.24
CCDC115-202ENST00000409127 COA6Q5JTJ3 125 aaKnown RBP13.54□□□□□ -0.24
CCDC115-202ENST00000409127 SERTAD4-AS1Q5TG53 156 aa13.54□□□□□ -0.24
CCDC115-202ENST00000409127 KRTAP7-1Q8IUC3 87 aa13.54□□□□□ -0.24
CCDC115-202ENST00000409127 PLEKHB2Q96CS7 222 aa13.54□□□□□ -0.24
CCDC115-202ENST00000409127 LINC00158P58513 81 aa13.53□□□□□ -0.24
CCDC115-202ENST00000409127 MYMXA0A1B0GTQ4 84 aa13.52□□□□□ -0.25
CCDC115-202ENST00000409127 SYS1-DBNDD2H3BUS1 97 aa13.52□□□□□ -0.25
CCDC115-202ENST00000409127 MRPL55Q7Z7F7 128 aaKnown RBP13.52□□□□□ -0.25
CCDC115-202ENST00000409127 NKAPP1Q8N9T2 125 aa13.52□□□□□ -0.25
CCDC115-202ENST00000409127 LEPROTO15243 131 aa13.51□□□□□ -0.25
CCDC115-202ENST00000409127 PMCHL2Q9BQD1 86 aa13.51□□□□□ -0.25
CCDC115-202ENST00000409127 NDUFA12Q9UI09 145 aa13.51□□□□□ -0.25
CCDC115-202ENST00000409127 RPL24P83731 157 aaKnown RBP13.5□□□□□ -0.25
CCDC115-202ENST00000409127 MEIG1Q5JSS6 88 aa13.5□□□□□ -0.25
CCDC115-202ENST00000409127 REG3GQ6UW15 175 aa13.5□□□□□ -0.25
CCDC115-202ENST00000409127 SND1-IT1Q9HBX3 110 aa13.5□□□□□ -0.25
CCDC115-202ENST00000409127 MYCBP2O75592 4640 aa13.5□□□□□ -0.25
CCDC115-202ENST00000409127 SRSF9Q13242 221 aaKnown RBP eCLIP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms