RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 NDUFC1O43677 76 aa15.48■□□□□ 0.07
CLDND1-202ENST00000394180 C16orf95Q9H693 158 aa15.48■□□□□ 0.07
CLDND1-202ENST00000394180 A8MTW9 85 aa15.47■□□□□ 0.07
CLDND1-202ENST00000394180 NCR3O14931 201 aa15.47■□□□□ 0.07
CLDND1-202ENST00000394180 LECT2O14960 151 aa15.47■□□□□ 0.07
CLDND1-202ENST00000394180 IGHV3-73A0A0B4J1V6 119 aa15.47■□□□□ 0.07
CLDND1-202ENST00000394180 IGHV3-11P01762 117 aa15.47■□□□□ 0.07
CLDND1-202ENST00000394180 SS18Q15532 418 aa15.47■□□□□ 0.07
CLDND1-202ENST00000394180 TMEM86BQ8N661 226 aa15.46■□□□□ 0.07
CLDND1-202ENST00000394180 HIVEP2P31629 2446 aa15.46■□□□□ 0.06
CLDND1-202ENST00000394180 A6NDX4 124 aa15.45■□□□□ 0.06
CLDND1-202ENST00000394180 LY6G6DO95868 133 aa15.45■□□□□ 0.06
CLDND1-202ENST00000394180 MIR7-3HGQ8N6C7 128 aa15.45■□□□□ 0.06
CLDND1-202ENST00000394180 UBL5Q9BZL1 73 aa15.45■□□□□ 0.06
CLDND1-202ENST00000394180 TRAV23DV6A0A075B6W5 121 aa15.45■□□□□ 0.06
CLDND1-202ENST00000394180 Q6ZSN1 163 aa15.45■□□□□ 0.06
CLDND1-202ENST00000394180 C1orf43Q9BWL3 253 aa15.45■□□□□ 0.06
CLDND1-202ENST00000394180 HILS1P60008 231 aa15.44■□□□□ 0.06
CLDND1-202ENST00000394180 CYSRT1A8MQ03 144 aa15.44■□□□□ 0.06
CLDND1-202ENST00000394180 Q6YL49 198 aa15.43■□□□□ 0.06
CLDND1-202ENST00000394180 IGKV3-20P01619 116 aa15.43■□□□□ 0.06
CLDND1-202ENST00000394180 BLCAPP62952 87 aa15.43■□□□□ 0.06
CLDND1-202ENST00000394180 TMEM256-PLSCR3K7ERE1 68 aa15.42■□□□□ 0.06
CLDND1-202ENST00000394180 IBA57-AS1B1ANH7 110 aa15.41■□□□□ 0.06
CLDND1-202ENST00000394180 RPL36AP83881 106 aaKnown RBP15.41■□□□□ 0.06
CLDND1-202ENST00000394180 RPL36ALQ969Q0 106 aaKnown RBP15.41■□□□□ 0.06
CLDND1-202ENST00000394180 CDC42SE2Q9NRR3 84 aa15.4■□□□□ 0.06
CLDND1-202ENST00000394180 CFHR3Q02985 330 aa15.4■□□□□ 0.06
CLDND1-202ENST00000394180 ENHOQ6UWT2 76 aa15.4■□□□□ 0.06
CLDND1-202ENST00000394180 COX7B2Q8TF08 81 aa15.4■□□□□ 0.06
CLDND1-202ENST00000394180 Q9UF83 564 aa15.4■□□□□ 0.06
CLDND1-202ENST00000394180 NSD1Q96L73 2696 aaPredicted RBP15.4■□□□□ 0.06
CLDND1-202ENST00000394180 FAM19A1Q7Z5A9 133 aa15.39■□□□□ 0.05
CLDND1-202ENST00000394180 CCL18P55774 89 aa15.38■□□□□ 0.05
CLDND1-202ENST00000394180 FP248Q71RG6 208 aaPredicted RBP15.38■□□□□ 0.05
CLDND1-202ENST00000394180 IGHV3-38A0A0C4DH36 116 aa15.37■□□□□ 0.05
CLDND1-202ENST00000394180 TRBV10-1A0A0K0K1A3 114 aa15.37■□□□□ 0.05
CLDND1-202ENST00000394180 A0A1W2PRX2 142 aa15.36■□□□□ 0.05
CLDND1-202ENST00000394180 RPL35AP18077 110 aaKnown RBP15.36■□□□□ 0.05
CLDND1-202ENST00000394180 TRBV6-4A0A1B0GX49 114 aa15.36■□□□□ 0.05
CLDND1-202ENST00000394180 F8P00451 2351 aa15.36■□□□□ 0.05
CLDND1-202ENST00000394180 TMEM89A2RUT3 159 aa15.35■□□□□ 0.05
CLDND1-202ENST00000394180 LINC00482Q8N8I6 264 aa15.35■□□□□ 0.05
CLDND1-202ENST00000394180 EDN2P20800 178 aa15.35■□□□□ 0.05
CLDND1-202ENST00000394180 K7EQD1 137 aa15.34■□□□□ 0.05
CLDND1-202ENST00000394180 NIPBLQ6KC79 2804 aaeCLIP15.34■□□□□ 0.05
CLDND1-202ENST00000394180 C11orf72Q8NBR9 251 aa15.33■□□□□ 0.04
CLDND1-202ENST00000394180 INAFM1C9JVW0 142 aa15.32■□□□□ 0.04
CLDND1-202ENST00000394180 LINC00158P58513 81 aa15.32■□□□□ 0.04
CLDND1-202ENST00000394180 ESM1Q9NQ30 184 aa15.32■□□□□ 0.04
CLDND1-202ENST00000394180 FN1P02751 2386 aaKnown RBP15.32■□□□□ 0.04
CLDND1-202ENST00000394180 Q8N814 137 aa15.31■□□□□ 0.04
CLDND1-202ENST00000394180 DNAJC9-AS1A6NH13 148 aa15.3■□□□□ 0.04
CLDND1-202ENST00000394180 V9GYY9 64 aa15.3■□□□□ 0.04
CLDND1-202ENST00000394180 LOC110117498A0A087WWA1 95 aa15.29■□□□□ 0.04
CLDND1-202ENST00000394180 SLPIP03973 132 aa15.28■□□□□ 0.04
CLDND1-202ENST00000394180 CXCL6P80162 114 aa15.28■□□□□ 0.04
CLDND1-202ENST00000394180 WFDC9Q8NEX5 89 aa15.28■□□□□ 0.04
CLDND1-202ENST00000394180 SETD2Q9BYW2 2564 aaPredicted RBP15.28■□□□□ 0.04
CLDND1-202ENST00000394180 TEP1Q99973 2627 aaKnown RBP15.27■□□□□ 0.03
CLDND1-202ENST00000394180 TRBV7-6A0A0J9YX20 115 aa15.27■□□□□ 0.03
CLDND1-202ENST00000394180 ERC2-IT1O76042 136 aa15.26■□□□□ 0.03
CLDND1-202ENST00000394180 ZNF702PQ9H963 129 aa15.26■□□□□ 0.03
CLDND1-202ENST00000394180 MAST4O15021 2626 aa15.26■□□□□ 0.03
CLDND1-202ENST00000394180 PAX4O43316 350 aa15.25■□□□□ 0.03
CLDND1-202ENST00000394180 C1orf195Q5TG92 126 aa15.25■□□□□ 0.03
CLDND1-202ENST00000394180 NTM-AS1Q6ZSK4 140 aa15.25■□□□□ 0.03
CLDND1-202ENST00000394180 F8WEM9 126 aa15.25■□□□□ 0.03
CLDND1-202ENST00000394180 H3BQ85 93 aa15.25■□□□□ 0.03
CLDND1-202ENST00000394180 PDE6GP18545 87 aa15.25■□□□□ 0.03
CLDND1-202ENST00000394180 C10orf99Q6UWK7 81 aa15.25■□□□□ 0.03
CLDND1-202ENST00000394180 PKIGQ9Y2B9 76 aa15.25■□□□□ 0.03
CLDND1-202ENST00000394180 HTN1P15515 57 aa15.24■□□□□ 0.03
CLDND1-202ENST00000394180 SEC61GP60059 68 aa15.24■□□□□ 0.03
CLDND1-202ENST00000394180 Q6ZQT0 140 aa15.23■□□□□ 0.03
CLDND1-202ENST00000394180 C11orf44Q8N8P7 122 aa15.22■□□□□ 0.03
CLDND1-202ENST00000394180 LINC01547P58512 204 aaPredicted RBP15.21■□□□□ 0.03
CLDND1-202ENST00000394180 RBM3P98179 157 aaKnown RBP15.21■□□□□ 0.03
CLDND1-202ENST00000394180 UBE2L6O14933 153 aa15.2■□□□□ 0.02
CLDND1-202ENST00000394180 A0A087WZ39 114 aa15.19■□□□□ 0.02
CLDND1-202ENST00000394180 RMI2Q96E14 147 aa15.19■□□□□ 0.02
CLDND1-202ENST00000394180 IGHV3OR16-9A0A0B4J2B5 98 aa15.19■□□□□ 0.02
CLDND1-202ENST00000394180 TRBV7-4A0A0J9YYF1 115 aa15.18■□□□□ 0.02
CLDND1-202ENST00000394180 IL17DQ8TAD2 202 aa15.18■□□□□ 0.02
CLDND1-202ENST00000394180 JMJD1CQ15652 2540 aa15.18■□□□□ 0.02
CLDND1-202ENST00000394180 ZNF561-AS1K7EIQ3 104 aa15.17■□□□□ 0.02
CLDND1-202ENST00000394180 INSP01308 110 aa15.17■□□□□ 0.02
CLDND1-202ENST00000394180 C6orf223Q8N319 242 aa15.17■□□□□ 0.02
CLDND1-202ENST00000394180 RNASE1P07998 156 aaKnown RBP15.17■□□□□ 0.02
CLDND1-202ENST00000394180 C9orf66Q5T8R8 295 aa15.16■□□□□ 0.02
CLDND1-202ENST00000394180 TOMM7Q9P0U1 55 aa15.16■□□□□ 0.02
CLDND1-202ENST00000394180 DEFB131AP59861 70 aa15.16■□□□□ 0.02
CLDND1-202ENST00000394180 LAMTOR3Q9UHA4 124 aa15.16■□□□□ 0.02
CLDND1-202ENST00000394180 MIFP14174 115 aa15.15■□□□□ 0.02
CLDND1-202ENST00000394180 NANOS2P60321 138 aaKnown RBP15.15■□□□□ 0.02
CLDND1-202ENST00000394180 BRK1Q8WUW1 75 aa15.15■□□□□ 0.02
CLDND1-202ENST00000394180 TRAV10A0A0B4J240 114 aa15.14■□□□□ 0.01
CLDND1-202ENST00000394180 Q6ZVQ6 151 aa15.14■□□□□ 0.01
CLDND1-202ENST00000394180 SNURFQ9Y675 71 aa15.14■□□□□ 0.01
CLDND1-202ENST00000394180 C2CD3Q4AC94 2353 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms