RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 LINC00694P0DN24 101 aa3.45□□□□□ -1.86
SCN3A-202ENST00000360093 RETNQ9HD89 108 aa3.44□□□□□ -1.86
SCN3A-202ENST00000360093 KIF25-AS1Q9Y6Z4 181 aa3.44□□□□□ -1.86
SCN3A-202ENST00000360093 CASC2Q6XLA1 102 aa3.44□□□□□ -1.86
SCN3A-202ENST00000360093 DOPEY1Q5JWR5 2465 aa3.44□□□□□ -1.86
SCN3A-202ENST00000360093 LINC00310P59036 64 aa3.44□□□□□ -1.86
SCN3A-202ENST00000360093 Q6JHZ5 121 aa3.44□□□□□ -1.86
SCN3A-202ENST00000360093 SDIM1Q6ZPB5 146 aa3.44□□□□□ -1.86
SCN3A-202ENST00000360093 Q8N814 137 aa3.44□□□□□ -1.86
SCN3A-202ENST00000360093 ZNF462Q96JM2 2506 aa3.44□□□□□ -1.86
SCN3A-202ENST00000360093 MUC4Q99102 2169 aa3.44□□□□□ -1.86
SCN3A-202ENST00000360093 FSHBP01225 129 aa3.44□□□□□ -1.86
SCN3A-202ENST00000360093 ENHOQ6UWT2 76 aa3.44□□□□□ -1.86
SCN3A-202ENST00000360093 RPL37AP8A6NKH3 93 aa3.44□□□□□ -1.86
SCN3A-202ENST00000360093 LINC00526Q96FQ7 95 aa3.44□□□□□ -1.86
SCN3A-202ENST00000360093 A0A096LNI7 61 aa3.44□□□□□ -1.86
SCN3A-202ENST00000360093 PRB2P02812 416 aaPredicted RBP3.44□□□□□ -1.86
SCN3A-202ENST00000360093 C1orf134Q5TEV5 83 aa3.44□□□□□ -1.86
SCN3A-202ENST00000360093 LINC01556Q5JQF7 62 aa3.43□□□□□ -1.86
SCN3A-202ENST00000360093 Q6ZSN1 163 aa3.43□□□□□ -1.86
SCN3A-202ENST00000360093 C6orf223Q8N319 242 aa3.43□□□□□ -1.86
SCN3A-202ENST00000360093 MRPL55Q7Z7F7 128 aaKnown RBP3.43□□□□□ -1.86
SCN3A-202ENST00000360093 UTRNP46939 3433 aa3.43□□□□□ -1.86
SCN3A-202ENST00000360093 C3orf84H3BNL1 204 aa3.43□□□□□ -1.86
SCN3A-202ENST00000360093 TRBV10-3A0A0K0K1G6 114 aa3.43□□□□□ -1.86
SCN3A-202ENST00000360093 NTM-AS1Q6ZSK4 140 aa3.43□□□□□ -1.86
SCN3A-202ENST00000360093 A0A096LNJ9 63 aa3.42□□□□□ -1.86
SCN3A-202ENST00000360093 WFDC10BQ8IUB3 73 aa3.42□□□□□ -1.86
SCN3A-202ENST00000360093 C3orf22Q8N5N4 141 aa3.42□□□□□ -1.86
SCN3A-202ENST00000360093 Q6Q795 121 aa3.42□□□□□ -1.86
SCN3A-202ENST00000360093 FAM19A3Q7Z5A8 133 aa3.42□□□□□ -1.86
SCN3A-202ENST00000360093 SERP2Q8N6R1 65 aa3.42□□□□□ -1.86
SCN3A-202ENST00000360093 V9GYY9 64 aa3.42□□□□□ -1.86
SCN3A-202ENST00000360093 C5orf47Q569G3 176 aa3.41□□□□□ -1.86
SCN3A-202ENST00000360093 MT-ATP8P03928 68 aa3.41□□□□□ -1.86
SCN3A-202ENST00000360093 SETD2Q9BYW2 2564 aaPredicted RBP3.41□□□□□ -1.86
SCN3A-202ENST00000360093 PPDPFQ9H3Y8 114 aa3.41□□□□□ -1.86
SCN3A-202ENST00000360093 PKD1L2Q7Z442 2459 aa3.41□□□□□ -1.86
SCN3A-202ENST00000360093 IGLV9-49A0A0B4J1Y8 123 aa3.41□□□□□ -1.86
SCN3A-202ENST00000360093 C1orf137Q5JT78 98 aa3.41□□□□□ -1.86
SCN3A-202ENST00000360093 IGLV5-39A0A0G2JS06 123 aa3.41□□□□□ -1.86
SCN3A-202ENST00000360093 TSPEAR-AS2P59090 65 aa3.41□□□□□ -1.86
SCN3A-202ENST00000360093 PRR15LQ9BU68 103 aa3.41□□□□□ -1.86
SCN3A-202ENST00000360093 LINC00315P59091 139 aa3.41□□□□□ -1.86
SCN3A-202ENST00000360093 C20orf197Q8N268 126 aa3.41□□□□□ -1.86
SCN3A-202ENST00000360093 ADAMTSL4-AS1Q5T5F5 129 aa3.4□□□□□ -1.86
SCN3A-202ENST00000360093 C9orf116Q5BN46 136 aaPredicted RBP3.4□□□□□ -1.86
SCN3A-202ENST00000360093 IGLV5-45A0A087WSX0 123 aa3.4□□□□□ -1.87
SCN3A-202ENST00000360093 FAM236DA0A1B0GTK5 79 aa3.4□□□□□ -1.87
SCN3A-202ENST00000360093 FAM236CP0DP71 79 aa3.4□□□□□ -1.87
SCN3A-202ENST00000360093 FASNP49327 2511 aaKnown RBP3.4□□□□□ -1.87
SCN3A-202ENST00000360093 IGHV3OR16-9A0A0B4J2B5 98 aa3.4□□□□□ -1.87
SCN3A-202ENST00000360093 SCXQ7RTU7 201 aa3.4□□□□□ -1.87
SCN3A-202ENST00000360093 TRBV7-6A0A0J9YX20 115 aa3.39□□□□□ -1.87
SCN3A-202ENST00000360093 A0A1B0GW54 56 aa3.39□□□□□ -1.87
SCN3A-202ENST00000360093 SPINK6Q6UWN8 80 aa3.39□□□□□ -1.87
SCN3A-202ENST00000360093 MTORP42345 2549 aa3.39□□□□□ -1.87
SCN3A-202ENST00000360093 LINC00575Q6W349 94 aa3.39□□□□□ -1.87
SCN3A-202ENST00000360093 Q6ZRU5 148 aa3.39□□□□□ -1.87
SCN3A-202ENST00000360093 SPTSSBQ8NFR3 76 aa3.39□□□□□ -1.87
SCN3A-202ENST00000360093 CELA1Q9UNI1 258 aa3.39□□□□□ -1.87
SCN3A-202ENST00000360093 COX7CP15954 63 aa3.38□□□□□ -1.87
SCN3A-202ENST00000360093 LIMD2Q9BT23 127 aa3.38□□□□□ -1.87
SCN3A-202ENST00000360093 ESRGQ1W209 222 aa3.38□□□□□ -1.87
SCN3A-202ENST00000360093 KRTAP24-1Q3LI83 254 aa3.38□□□□□ -1.87
SCN3A-202ENST00000360093 MDFIQ99750 246 aa3.38□□□□□ -1.87
SCN3A-202ENST00000360093 X6R8D5 127 aa3.38□□□□□ -1.87
SCN3A-202ENST00000360093 A0A087WYN8 130 aa3.38□□□□□ -1.87
SCN3A-202ENST00000360093 Q9BRP9 147 aa3.38□□□□□ -1.87
SCN3A-202ENST00000360093 K7ERS5 55 aa3.38□□□□□ -1.87
SCN3A-202ENST00000360093 TRAV7A0A075B6U4 112 aa3.38□□□□□ -1.87
SCN3A-202ENST00000360093 HRCT1Q6UXD1 115 aa3.38□□□□□ -1.87
SCN3A-202ENST00000360093 Q8N9L7 120 aa3.37□□□□□ -1.87
SCN3A-202ENST00000360093 PRR3P79522 188 aaKnown RBP3.37□□□□□ -1.87
SCN3A-202ENST00000360093 Q8NAQ8 132 aa3.37□□□□□ -1.87
SCN3A-202ENST00000360093 CIRBP-AS1Q8TBR5 109 aa3.37□□□□□ -1.87
SCN3A-202ENST00000360093 SBSPONQ8IVN8 264 aa3.37□□□□□ -1.87
SCN3A-202ENST00000360093 C22orf24Q9Y442 160 aa3.37□□□□□ -1.87
SCN3A-202ENST00000360093 A8MTW9 85 aa3.37□□□□□ -1.87
SCN3A-202ENST00000360093 WFDC13Q8IUB5 93 aa3.36□□□□□ -1.87
SCN3A-202ENST00000360093 ACANP16112 2415 aa3.36□□□□□ -1.87
SCN3A-202ENST00000360093 LINC00337Q8N6G1 96 aa3.36□□□□□ -1.87
SCN3A-202ENST00000360093 CXCL6P80162 114 aa3.35□□□□□ -1.87
SCN3A-202ENST00000360093 SERP1Q9Y6X1 66 aa3.35□□□□□ -1.87
SCN3A-202ENST00000360093 A0A096LNT2 108 aa3.35□□□□□ -1.87
SCN3A-202ENST00000360093 GVQW2A0A096LPI5 108 aaPredicted RBP3.35□□□□□ -1.87
SCN3A-202ENST00000360093 DNAH10OSP0CZ25 163 aa3.35□□□□□ -1.87
SCN3A-202ENST00000360093 XGP55808 180 aa3.35□□□□□ -1.87
SCN3A-202ENST00000360093 CEP350Q5VT06 3117 aa3.34□□□□□ -1.87
SCN3A-202ENST00000360093 POLQO75417 2590 aa3.34□□□□□ -1.87
SCN3A-202ENST00000360093 F8P00451 2351 aa3.34□□□□□ -1.87
SCN3A-202ENST00000360093 NBDYA0A0U1RRE5 68 aa3.34□□□□□ -1.87
SCN3A-202ENST00000360093 SMCR5Q8TEV8 140 aa3.34□□□□□ -1.87
SCN3A-202ENST00000360093 C6orf48Q9UBA6 75 aa3.34□□□□□ -1.87
SCN3A-202ENST00000360093 C16orf90A8MZG2 172 aa3.34□□□□□ -1.87
SCN3A-202ENST00000360093 PRRC2CQ9Y520 2896 aaKnown RBP3.34□□□□□ -1.88
SCN3A-202ENST00000360093 CSNK1G2-AS1Q8NCQ2 148 aa3.34□□□□□ -1.88
SCN3A-202ENST00000360093 FAM30AQ9NZY2 134 aa3.33□□□□□ -1.88
SCN3A-202ENST00000360093 WWC2-AS2Q96NR7 200 aa3.33□□□□□ -1.88
SCN3A-202ENST00000360093 ELOF1P60002 83 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms