RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 SERF1AO75920 110 aa11.24□□□□□ -0.61
CCS-201ENST00000310190 IFI27L1Q96BM0 104 aa11.24□□□□□ -0.61
CCS-201ENST00000310190 H3BRM9 83 aa11.23□□□□□ -0.61
CCS-201ENST00000310190 PRSS2P07478 247 aa11.23□□□□□ -0.61
CCS-201ENST00000310190 S100A1P23297 94 aa11.23□□□□□ -0.61
CCS-201ENST00000310190 MAJINQ3KP22 176 aa11.23□□□□□ -0.61
CCS-201ENST00000310190 C6orf226Q5I0X4 101 aa11.23□□□□□ -0.61
CCS-201ENST00000310190 ATP6V1G1O75348 118 aa11.22□□□□□ -0.61
CCS-201ENST00000310190 ZNF22P17026 224 aaPredicted RBP11.22□□□□□ -0.61
CCS-201ENST00000310190 IGKV2-24A0A0C4DH68 120 aa11.21□□□□□ -0.61
CCS-201ENST00000310190 F8VRH5 84 aa11.21□□□□□ -0.61
CCS-201ENST00000310190 HIST1H2BKO60814 126 aa11.21□□□□□ -0.61
CCS-201ENST00000310190 HIST1H2BJP06899 126 aa11.21□□□□□ -0.61
CCS-201ENST00000310190 HIST1H2BOP23527 126 aa11.21□□□□□ -0.61
CCS-201ENST00000310190 HIST1H2BBP33778 126 aa11.21□□□□□ -0.61
CCS-201ENST00000310190 HIST1H2BDP58876 126 aa11.21□□□□□ -0.61
CCS-201ENST00000310190 HIST1H2BCP62807 126 aa11.21□□□□□ -0.61
CCS-201ENST00000310190 HIST2H2BEQ16778 126 aa11.21□□□□□ -0.61
CCS-201ENST00000310190 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.21□□□□□ -0.61
CCS-201ENST00000310190 C2orf82Q6UX34 121 aa11.21□□□□□ -0.61
CCS-201ENST00000310190 STPG4Q8N801 248 aa11.21□□□□□ -0.61
CCS-201ENST00000310190 HIST1H2BHQ93079 126 aa11.21□□□□□ -0.61
CCS-201ENST00000310190 HIST1H2BNQ99877 126 aa11.21□□□□□ -0.61
CCS-201ENST00000310190 HIST1H2BMQ99879 126 aa11.21□□□□□ -0.61
CCS-201ENST00000310190 MYCBP2O75592 4640 aa11.21□□□□□ -0.62
CCS-201ENST00000310190 NDUFC2-KCTD14E9PQ53 114 aa11.2□□□□□ -0.62
CCS-201ENST00000310190 CKS1BP61024 79 aa11.2□□□□□ -0.62
CCS-201ENST00000310190 FAM19A2Q8N3H0 131 aa11.2□□□□□ -0.62
CCS-201ENST00000310190 COX7B2Q8TF08 81 aa11.2□□□□□ -0.62
CCS-201ENST00000310190 DPH3Q96FX2 82 aa11.2□□□□□ -0.62
CCS-201ENST00000310190 FLG2Q5D862 2391 aaPredicted RBP11.2□□□□□ -0.62
CCS-201ENST00000310190 C11orf86A6NJI1 115 aa11.19□□□□□ -0.62
CCS-201ENST00000310190 NUPR1O60356 82 aa11.19□□□□□ -0.62
CCS-201ENST00000310190 Q6ZRP5 223 aa11.19□□□□□ -0.62
CCS-201ENST00000310190 LEPROTL1O95214 131 aa11.18□□□□□ -0.62
CCS-201ENST00000310190 INAFM2P0DMQ5 153 aa11.18□□□□□ -0.62
CCS-201ENST00000310190 NDUFA6P56556 154 aa11.18□□□□□ -0.62
CCS-201ENST00000310190 GAGE2BQ13066 116 aa11.18□□□□□ -0.62
CCS-201ENST00000310190 COA6Q5JTJ3 125 aaKnown RBP11.18□□□□□ -0.62
CCS-201ENST00000310190 TOMM7Q9P0U1 55 aa11.18□□□□□ -0.62
CCS-201ENST00000310190 CHTOPQ9Y3Y2 248 aaKnown RBP11.18□□□□□ -0.62
CCS-201ENST00000310190 HSPB8Q9UJY1 196 aa11.17□□□□□ -0.62
CCS-201ENST00000310190 SPINK8P0C7L1 97 aa11.16□□□□□ -0.62
CCS-201ENST00000310190 RPL37AP61513 92 aaKnown RBP11.16□□□□□ -0.62
CCS-201ENST00000310190 RPL18AQ02543 176 aaKnown RBP11.16□□□□□ -0.62
CCS-201ENST00000310190 SFTA2Q6UW10 78 aa11.16□□□□□ -0.62
CCS-201ENST00000310190 A0A1W2PNN7 141 aa11.15□□□□□ -0.62
CCS-201ENST00000310190 C7orf33Q8WU49 177 aa11.15□□□□□ -0.62
CCS-201ENST00000310190 C9orf116Q5BN46 136 aaPredicted RBP11.13□□□□□ -0.63
CCS-201ENST00000310190 DMBT1Q9UGM3 2413 aaPredicted RBP11.12□□□□□ -0.63
CCS-201ENST00000310190 TMEM223A0PJW6 202 aa11.12□□□□□ -0.63
CCS-201ENST00000310190 TMEM170BQ5T4T1 132 aa11.11□□□□□ -0.63
CCS-201ENST00000310190 COX17Q14061 63 aa11.1□□□□□ -0.63
CCS-201ENST00000310190 C9orf129Q5T035 196 aaKnown RBP11.1□□□□□ -0.63
CCS-201ENST00000310190 PLNP26678 52 aa11.09□□□□□ -0.63
CCS-201ENST00000310190 KRTAP7-1Q8IUC3 87 aa11.09□□□□□ -0.63
CCS-201ENST00000310190 ZNF625Q96I27 306 aaPredicted RBP11.09□□□□□ -0.63
CCS-201ENST00000310190 FAT3Q8TDW7 4589 aa11.08□□□□□ -0.64
CCS-201ENST00000310190 GAGE2EQ4V326 116 aa11.08□□□□□ -0.64
CCS-201ENST00000310190 GAGE2DQ9UEU5 116 aa11.08□□□□□ -0.64
CCS-201ENST00000310190 PLA2G2DQ9UNK4 145 aa11.08□□□□□ -0.64
CCS-201ENST00000310190 PRR3P79522 188 aaKnown RBP11.07□□□□□ -0.64
CCS-201ENST00000310190 MAP1LC3CQ9BXW4 147 aa11.07□□□□□ -0.64
CCS-201ENST00000310190 FABP4P15090 132 aa11.06□□□□□ -0.64
CCS-201ENST00000310190 TP73-AS1Q9UF72 201 aa11.06□□□□□ -0.64
CCS-201ENST00000310190 LRP1Q07954 4544 aaKnown RBP11.06□□□□□ -0.64
CCS-201ENST00000310190 DPM2O94777 84 aa11.05□□□□□ -0.64
CCS-201ENST00000310190 FAM168BA1KXE4 195 aa11.04□□□□□ -0.64
CCS-201ENST00000310190 KRTAP29-1A8MX34 341 aaPredicted RBP11.04□□□□□ -0.64
CCS-201ENST00000310190 SYS1-DBNDD2H3BUS1 97 aa11.03□□□□□ -0.64
CCS-201ENST00000310190 HNRNPA3P51991 378 aaKnown RBP11.03□□□□□ -0.64
CCS-201ENST00000310190 HERC1Q15751 4861 aa11.02□□□□□ -0.65
CCS-201ENST00000310190 IGLV5-37A0A075B6J1 123 aa11.02□□□□□ -0.65
CCS-201ENST00000310190 IGKCP01834 107 aa11.02□□□□□ -0.65
CCS-201ENST00000310190 PET117Q6UWS5 81 aa11.02□□□□□ -0.65
CCS-201ENST00000310190 ERG28Q9UKR5 140 aa11.02□□□□□ -0.65
CCS-201ENST00000310190 OXTP01178 125 aa11.01□□□□□ -0.65
CCS-201ENST00000310190 HERV-K104P63124 156 aa11.01□□□□□ -0.65
CCS-201ENST00000310190 SRSF9Q13242 221 aaKnown RBP eCLIP11.01□□□□□ -0.65
CCS-201ENST00000310190 LINC01545Q5VT33 79 aa11.01□□□□□ -0.65
CCS-201ENST00000310190 PHF5AQ7RTV0 110 aaKnown RBP11.01□□□□□ -0.65
CCS-201ENST00000310190 XAGE1AQ9HD64 81 aa11□□□□□ -0.65
CCS-201ENST00000310190 PSORS1C2Q9UIG4 136 aa11□□□□□ -0.65
CCS-201ENST00000310190 LINC00587B1AMM8 73 aa10.99□□□□□ -0.65
CCS-201ENST00000310190 M0QXV9 152 aa10.99□□□□□ -0.65
CCS-201ENST00000310190 LEPROTO15243 131 aa10.99□□□□□ -0.65
CCS-201ENST00000310190 SERTAD4-AS1Q5TG53 156 aa10.99□□□□□ -0.65
CCS-201ENST00000310190 FAM19A5Q7Z5A7 132 aaPredicted RBP10.99□□□□□ -0.65
CCS-201ENST00000310190 PLEKHB2Q96CS7 222 aa10.99□□□□□ -0.65
CCS-201ENST00000310190 H0Y8G0 127 aa10.98□□□□□ -0.65
CCS-201ENST00000310190 LBHQ53QV2 105 aaPredicted RBP10.98□□□□□ -0.65
CCS-201ENST00000310190 C22orf24Q9Y442 160 aa10.98□□□□□ -0.65
CCS-201ENST00000310190 NMUP48645 174 aa10.97□□□□□ -0.65
CCS-201ENST00000310190 HERVK_113P61574 105 aa10.97□□□□□ -0.65
CCS-201ENST00000310190 SPINK6Q6UWN8 80 aa10.97□□□□□ -0.65
CCS-201ENST00000310190 MYMXA0A1B0GTQ4 84 aa10.96□□□□□ -0.65
CCS-201ENST00000310190 SND1-IT1Q9HBX3 110 aa10.96□□□□□ -0.65
CCS-201ENST00000310190 NDUFA12Q9UI09 145 aa10.96□□□□□ -0.65
CCS-201ENST00000310190 C3orf79P0CE67 100 aa10.95□□□□□ -0.66
CCS-201ENST00000310190 PFN2P35080 140 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms