RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 C11orf86A6NJI1 115 aa12.29□□□□□ -0.44
CENPA-201ENST00000233505 F8VRH5 84 aa12.29□□□□□ -0.44
CENPA-201ENST00000233505 CXCL5P42830 114 aa12.29□□□□□ -0.44
CENPA-201ENST00000233505 Q8N1X5 172 aa12.29□□□□□ -0.44
CENPA-201ENST00000233505 CIRBP-AS1Q8TBR5 109 aa12.29□□□□□ -0.44
CENPA-201ENST00000233505 IGLV5-39A0A0G2JS06 123 aa12.28□□□□□ -0.44
CENPA-201ENST00000233505 PANO1I0J062 215 aa12.28□□□□□ -0.44
CENPA-201ENST00000233505 HAMPP81172 84 aa12.28□□□□□ -0.44
CENPA-201ENST00000233505 C6orf226Q5I0X4 101 aa12.28□□□□□ -0.44
CENPA-201ENST00000233505 C10orf25Q5T742 122 aa12.28□□□□□ -0.44
CENPA-201ENST00000233505 UNQ6190/PRO20217Q6UXQ8 127 aa12.28□□□□□ -0.44
CENPA-201ENST00000233505 TOMM7Q9P0U1 55 aa12.28□□□□□ -0.44
CENPA-201ENST00000233505 SPINK8P0C7L1 97 aa12.27□□□□□ -0.45
CENPA-201ENST00000233505 TLX1NBP0CAT3 122 aa12.27□□□□□ -0.45
CENPA-201ENST00000233505 ODF1Q14990 250 aa12.27□□□□□ -0.45
CENPA-201ENST00000233505 C6orf48Q9UBA6 75 aa12.27□□□□□ -0.45
CENPA-201ENST00000233505 A0A096LNI7 61 aa12.26□□□□□ -0.45
CENPA-201ENST00000233505 CHTF8P0CG12 524 aa12.26□□□□□ -0.45
CENPA-201ENST00000233505 FABP4P15090 132 aa12.26□□□□□ -0.45
CENPA-201ENST00000233505 CKS1BP61024 79 aa12.26□□□□□ -0.45
CENPA-201ENST00000233505 COX7B2Q8TF08 81 aa12.26□□□□□ -0.45
CENPA-201ENST00000233505 C2orf82Q6UX34 121 aa12.25□□□□□ -0.45
CENPA-201ENST00000233505 PTTG1IPP53801 180 aa12.24□□□□□ -0.45
CENPA-201ENST00000233505 TMEM170BQ5T4T1 132 aa12.24□□□□□ -0.45
CENPA-201ENST00000233505 MAP1LC3CQ9BXW4 147 aa12.24□□□□□ -0.45
CENPA-201ENST00000233505 PLAC8Q9NZF1 115 aa12.24□□□□□ -0.45
CENPA-201ENST00000233505 IGKV2-24A0A0C4DH68 120 aa12.23□□□□□ -0.45
CENPA-201ENST00000233505 PLNP26678 52 aa12.22□□□□□ -0.45
CENPA-201ENST00000233505 MAJINQ3KP22 176 aa12.22□□□□□ -0.45
CENPA-201ENST00000233505 A0A087WYN8 130 aa12.21□□□□□ -0.45
CENPA-201ENST00000233505 TMEM223A0PJW6 202 aa12.2□□□□□ -0.46
CENPA-201ENST00000233505 NDUFC2-KCTD14E9PQ53 114 aa12.2□□□□□ -0.46
CENPA-201ENST00000233505 H0Y8G0 127 aa12.2□□□□□ -0.46
CENPA-201ENST00000233505 RPL18AQ02543 176 aaKnown RBP12.2□□□□□ -0.46
CENPA-201ENST00000233505 GAGE2BQ13066 116 aa12.2□□□□□ -0.46
CENPA-201ENST00000233505 VPS13BQ7Z7G8 4022 aa12.19□□□□□ -0.46
CENPA-201ENST00000233505 SMR3BP02814 79 aaPredicted RBP12.19□□□□□ -0.46
CENPA-201ENST00000233505 SFTA2Q6UW10 78 aa12.19□□□□□ -0.46
CENPA-201ENST00000233505 DPH3Q96FX2 82 aa12.19□□□□□ -0.46
CENPA-201ENST00000233505 EPM2AB3EWF7 344 aa12.18□□□□□ -0.46
CENPA-201ENST00000233505 FAM229AH3BQW9 127 aa12.18□□□□□ -0.46
CENPA-201ENST00000233505 SYS1-DBNDD2H3BUS1 97 aa12.18□□□□□ -0.46
CENPA-201ENST00000233505 DPM2O94777 84 aa12.18□□□□□ -0.46
CENPA-201ENST00000233505 Q6ZRP5 223 aa12.18□□□□□ -0.46
CENPA-201ENST00000233505 LINC00528Q8N1L1 170 aa12.18□□□□□ -0.46
CENPA-201ENST00000233505 STPG4Q8N801 248 aa12.18□□□□□ -0.46
CENPA-201ENST00000233505 Q5VSD8 79 aa12.17□□□□□ -0.46
CENPA-201ENST00000233505 C9orf116Q5BN46 136 aaPredicted RBP12.16□□□□□ -0.46
CENPA-201ENST00000233505 PET117Q6UWS5 81 aa12.15□□□□□ -0.46
CENPA-201ENST00000233505 IGKCP01834 107 aa12.14□□□□□ -0.47
CENPA-201ENST00000233505 LINC01545Q5VT33 79 aa12.14□□□□□ -0.47
CENPA-201ENST00000233505 ZNF625Q96I27 306 aaPredicted RBP12.13□□□□□ -0.47
CENPA-201ENST00000233505 GAGE2EQ4V326 116 aa12.12□□□□□ -0.47
CENPA-201ENST00000233505 PMCHL2Q9BQD1 86 aa12.12□□□□□ -0.47
CENPA-201ENST00000233505 GAGE2DQ9UEU5 116 aa12.12□□□□□ -0.47
CENPA-201ENST00000233505 PLA2G1BP04054 148 aaKnown RBP12.11□□□□□ -0.47
CENPA-201ENST00000233505 C3orf79P0CE67 100 aa12.11□□□□□ -0.47
CENPA-201ENST00000233505 HERVK_113P61574 105 aa12.11□□□□□ -0.47
CENPA-201ENST00000233505 A0A1W2PNN7 141 aa12.1□□□□□ -0.47
CENPA-201ENST00000233505 HIST3H2BBQ8N257 126 aa12.1□□□□□ -0.47
CENPA-201ENST00000233505 S100A6P06703 90 aa12.09□□□□□ -0.47
CENPA-201ENST00000233505 C7orf33Q8WU49 177 aa12.09□□□□□ -0.47
CENPA-201ENST00000233505 COX17Q14061 63 aa12.08□□□□□ -0.48
CENPA-201ENST00000233505 C9orf129Q5T035 196 aaKnown RBP12.08□□□□□ -0.48
CENPA-201ENST00000233505 PLEKHB2Q96CS7 222 aa12.08□□□□□ -0.48
CENPA-201ENST00000233505 LEPROTO15243 131 aa12.07□□□□□ -0.48
CENPA-201ENST00000233505 KRTDAPP60985 99 aa12.07□□□□□ -0.48
CENPA-201ENST00000233505 ERG28Q9UKR5 140 aa12.07□□□□□ -0.48
CENPA-201ENST00000233505 C20orf202A1L168 122 aa12.06□□□□□ -0.48
CENPA-201ENST00000233505 KRTAP10-4P60372 401 aaPredicted RBP12.06□□□□□ -0.48
CENPA-201ENST00000233505 RPL37AP61513 92 aaKnown RBP12.06□□□□□ -0.48
CENPA-201ENST00000233505 HERV-K104P63124 156 aa12.06□□□□□ -0.48
CENPA-201ENST00000233505 HIST1H2BLQ99880 126 aa12.06□□□□□ -0.48
CENPA-201ENST00000233505 INAFM2P0DMQ5 153 aa12.05□□□□□ -0.48
CENPA-201ENST00000233505 S100A2P29034 98 aa12.05□□□□□ -0.48
CENPA-201ENST00000233505 AKR1D1P51857 326 aa12.05□□□□□ -0.48
CENPA-201ENST00000233505 NDUFA12Q9UI09 145 aa12.05□□□□□ -0.48
CENPA-201ENST00000233505 TSPEAR-AS2P59090 65 aa12.04□□□□□ -0.48
CENPA-201ENST00000233505 XAGE1AQ9HD64 81 aa12.04□□□□□ -0.48
CENPA-201ENST00000233505 SRRM2Q9UQ35 2752 aaKnown RBP12.04□□□□□ -0.48
CENPA-201ENST00000233505 MYMXA0A1B0GTQ4 84 aa12.03□□□□□ -0.48
CENPA-201ENST00000233505 FAM168BA1KXE4 195 aa12.03□□□□□ -0.48
CENPA-201ENST00000233505 E9PLD3 99 aa12.03□□□□□ -0.48
CENPA-201ENST00000233505 J3QQQ9 107 aa12.03□□□□□ -0.48
CENPA-201ENST00000233505 NMUP48645 174 aa12.03□□□□□ -0.48
CENPA-201ENST00000233505 KRTAP7-1Q8IUC3 87 aa12.03□□□□□ -0.48
CENPA-201ENST00000233505 LINC00587B1AMM8 73 aa12.02□□□□□ -0.49
CENPA-201ENST00000233505 FAM19A5Q7Z5A7 132 aaPredicted RBP12.02□□□□□ -0.49
CENPA-201ENST00000233505 PLA2G2DQ9UNK4 145 aa12.02□□□□□ -0.49
CENPA-201ENST00000233505 HERC1Q15751 4861 aa12.02□□□□□ -0.49
CENPA-201ENST00000233505 MYCBP2O75592 4640 aa12.01□□□□□ -0.49
CENPA-201ENST00000233505 C5orf52A6NGY3 159 aa12.01□□□□□ -0.49
CENPA-201ENST00000233505 PFN2P35080 140 aa12.01□□□□□ -0.49
CENPA-201ENST00000233505 LGALS3P17931 250 aaKnown RBP12□□□□□ -0.49
CENPA-201ENST00000233505 SNRPEP62304 92 aaKnown RBP12□□□□□ -0.49
CENPA-201ENST00000233505 M0QXV9 152 aa11.99□□□□□ -0.49
CENPA-201ENST00000233505 SERTAD4-AS1Q5TG53 156 aa11.99□□□□□ -0.49
CENPA-201ENST00000233505 TP73-AS1Q9UF72 201 aa11.99□□□□□ -0.49
CENPA-201ENST00000233505 FLG2Q5D862 2391 aaPredicted RBP11.99□□□□□ -0.49
CENPA-201ENST00000233505 PHF5AQ7RTV0 110 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms