RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 GNB1LQ9BYB4 327 aa11.6□□□□□ -0.55
CLN6-210ENST00000635747 APOMO95445 188 aa11.59□□□□□ -0.55
CLN6-210ENST00000635747 MT-ND6P03923 174 aa11.59□□□□□ -0.55
CLN6-210ENST00000635747 RPL39P62891 51 aaKnown RBP11.59□□□□□ -0.55
CLN6-210ENST00000635747 MRPS36P82909 103 aaKnown RBP11.59□□□□□ -0.55
CLN6-210ENST00000635747 SYCNQ0VAF6 134 aa11.59□□□□□ -0.55
CLN6-210ENST00000635747 MAJINQ3KP22 176 aa11.59□□□□□ -0.55
CLN6-210ENST00000635747 C7orf33Q8WU49 177 aa11.59□□□□□ -0.55
CLN6-210ENST00000635747 YPEL4Q96NS1 127 aa11.59□□□□□ -0.55
CLN6-210ENST00000635747 IGKV2-24A0A0C4DH68 120 aa11.58□□□□□ -0.56
CLN6-210ENST00000635747 PRSS47A8MTI9 375 aa11.58□□□□□ -0.56
CLN6-210ENST00000635747 LINC00526Q96FQ7 95 aa11.58□□□□□ -0.56
CLN6-210ENST00000635747 ATP6V1G1O75348 118 aa11.57□□□□□ -0.56
CLN6-210ENST00000635747 CBLN2Q8IUK8 224 aa11.56□□□□□ -0.56
CLN6-210ENST00000635747 STPG4Q8N801 248 aa11.56□□□□□ -0.56
CLN6-210ENST00000635747 MAP1LC3AQ9H492 121 aa11.56□□□□□ -0.56
CLN6-210ENST00000635747 PKHD1L1Q86WI1 4243 aa11.55□□□□□ -0.56
CLN6-210ENST00000635747 IGLV4-69A0A075B6H9 119 aa11.55□□□□□ -0.56
CLN6-210ENST00000635747 TGIF2-C20orf24A0A0A6YYL0 155 aa11.55□□□□□ -0.56
CLN6-210ENST00000635747 IFI27P40305 119 aaPredicted RBP11.55□□□□□ -0.56
CLN6-210ENST00000635747 C5orf38Q86SI9 138 aa11.55□□□□□ -0.56
CLN6-210ENST00000635747 C2orf48Q96LS8 159 aa11.55□□□□□ -0.56
CLN6-210ENST00000635747 PYGO1Q9Y3Y4 419 aa11.55□□□□□ -0.56
CLN6-210ENST00000635747 A0A096LNI7 61 aa11.54□□□□□ -0.56
CLN6-210ENST00000635747 IFITM10A6NMD0 228 aa11.53□□□□□ -0.56
CLN6-210ENST00000635747 OR10D4PQ8NGN7 298 aa11.53□□□□□ -0.56
CLN6-210ENST00000635747 FAM104AQ969W3 186 aa11.53□□□□□ -0.56
CLN6-210ENST00000635747 CAMK2N2Q96S95 79 aa11.53□□□□□ -0.56
CLN6-210ENST00000635747 LRP1Q07954 4544 aaKnown RBP11.53□□□□□ -0.56
CLN6-210ENST00000635747 LOC107984640A0A0U1RRK4 108 aa11.52□□□□□ -0.57
CLN6-210ENST00000635747 LOC389332A0A1B0GUA5 103 aa11.52□□□□□ -0.57
CLN6-210ENST00000635747 F8WDY8 70 aa11.52□□□□□ -0.57
CLN6-210ENST00000635747 Q6ZRU5 148 aa11.52□□□□□ -0.57
CLN6-210ENST00000635747 Q8N8P6 123 aa11.52□□□□□ -0.57
CLN6-210ENST00000635747 FAT3Q8TDW7 4589 aa11.52□□□□□ -0.57
CLN6-210ENST00000635747 IGHV3OR16-9A0A0B4J2B5 98 aa11.51□□□□□ -0.57
CLN6-210ENST00000635747 K7EMI3 77 aa11.51□□□□□ -0.57
CLN6-210ENST00000635747 OPRPNQ99935 248 aaPredicted RBP11.51□□□□□ -0.57
CLN6-210ENST00000635747 HNRNPA3P51991 378 aaKnown RBP11.5□□□□□ -0.57
CLN6-210ENST00000635747 SPAG11BQ08648 103 aa11.5□□□□□ -0.57
CLN6-210ENST00000635747 ORMDL2Q53FV1 153 aa11.5□□□□□ -0.57
CLN6-210ENST00000635747 TMEM141Q96I45 108 aa11.5□□□□□ -0.57
CLN6-210ENST00000635747 PTTG1IPP53801 180 aa11.49□□□□□ -0.57
CLN6-210ENST00000635747 RNF151Q2KHN1 245 aa11.49□□□□□ -0.57
CLN6-210ENST00000635747 MRPL18Q9H0U6 180 aaKnown RBP11.49□□□□□ -0.57
CLN6-210ENST00000635747 CYSLTR1Q9Y271 337 aa11.49□□□□□ -0.57
CLN6-210ENST00000635747 IGLV4-3A0A075B6K6 122 aa11.48□□□□□ -0.57
CLN6-210ENST00000635747 G0S2P27469 103 aa11.48□□□□□ -0.57
CLN6-210ENST00000635747 ORAOV1Q8WV07 137 aa11.48□□□□□ -0.57
CLN6-210ENST00000635747 NXT2Q9NPJ8 142 aaKnown RBP11.48□□□□□ -0.57
CLN6-210ENST00000635747 TRAPPC1Q9Y5R8 145 aa11.48□□□□□ -0.57
CLN6-210ENST00000635747 COLCA2A8K830 154 aa11.47□□□□□ -0.57
CLN6-210ENST00000635747 NPSP0C0P6 89 aa11.47□□□□□ -0.57
CLN6-210ENST00000635747 FABP9Q0Z7S8 132 aa11.47□□□□□ -0.57
CLN6-210ENST00000635747 GAGE2BQ13066 116 aa11.47□□□□□ -0.57
CLN6-210ENST00000635747 Q6ZN92 141 aa11.47□□□□□ -0.57
CLN6-210ENST00000635747 TEX43Q6ZNM6 134 aa11.47□□□□□ -0.57
CLN6-210ENST00000635747 SCO1O75880 301 aa11.46□□□□□ -0.57
CLN6-210ENST00000635747 SERTAD4-AS1Q5TG53 156 aa11.46□□□□□ -0.57
CLN6-210ENST00000635747 C2orf66Q6UXQ4 117 aa11.46□□□□□ -0.57
CLN6-210ENST00000635747 C2orf88Q9BSF0 95 aa11.46□□□□□ -0.57
CLN6-210ENST00000635747 NDUFA1O15239 70 aa11.45□□□□□ -0.58
CLN6-210ENST00000635747 ALKBH7Q9BT30 221 aaPredicted RBP11.45□□□□□ -0.58
CLN6-210ENST00000635747 MRPL35Q9NZE8 188 aaKnown RBP11.45□□□□□ -0.58
CLN6-210ENST00000635747 A0A087WZ39 114 aa11.44□□□□□ -0.58
CLN6-210ENST00000635747 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.44□□□□□ -0.58
CLN6-210ENST00000635747 LINC00242Q5T6M2 205 aa11.44□□□□□ -0.58
CLN6-210ENST00000635747 VCX2Q9H322 139 aa11.44□□□□□ -0.58
CLN6-210ENST00000635747 PRR3P79522 188 aaKnown RBP11.43□□□□□ -0.58
CLN6-210ENST00000635747 KIAA1644Q3SXP7 199 aa11.43□□□□□ -0.58
CLN6-210ENST00000635747 PAPPA-AS1Q5QFB9 102 aa11.43□□□□□ -0.58
CLN6-210ENST00000635747 UBE2D1P51668 147 aa11.42□□□□□ -0.58
CLN6-210ENST00000635747 RPL18AQ02543 176 aaKnown RBP11.42□□□□□ -0.58
CLN6-210ENST00000635747 LINC01561Q8N1V8 128 aa11.42□□□□□ -0.58
CLN6-210ENST00000635747 Q6ZRP5 223 aa11.41□□□□□ -0.58
CLN6-210ENST00000635747 AMELXQ99217 191 aa11.41□□□□□ -0.58
CLN6-210ENST00000635747 IGIPA6NJ69 53 aa11.4□□□□□ -0.58
CLN6-210ENST00000635747 A0A0J9YXV3 536 aa11.39□□□□□ -0.59
CLN6-210ENST00000635747 TLX1NBP0CAT3 122 aa11.39□□□□□ -0.59
CLN6-210ENST00000635747 SEC11AP67812 179 aa11.39□□□□□ -0.59
CLN6-210ENST00000635747 A0A1W2PNN7 141 aa11.38□□□□□ -0.59
CLN6-210ENST00000635747 LINC01549A6NIU2 74 aa11.38□□□□□ -0.59
CLN6-210ENST00000635747 TRGC2P03986 189 aa11.38□□□□□ -0.59
CLN6-210ENST00000635747 C9orf116Q5BN46 136 aaPredicted RBP11.38□□□□□ -0.59
CLN6-210ENST00000635747 UNQ6190/PRO20217Q6UXQ8 127 aa11.38□□□□□ -0.59
CLN6-210ENST00000635747 TOMM6Q96B49 74 aa11.38□□□□□ -0.59
CLN6-210ENST00000635747 TIMM17AQ99595 171 aa11.38□□□□□ -0.59
CLN6-210ENST00000635747 KIAA0087Q14695 138 aa11.37□□□□□ -0.59
CLN6-210ENST00000635747 LINC00173Q6ZV60 143 aa11.37□□□□□ -0.59
CLN6-210ENST00000635747 FAM19A3Q7Z5A8 133 aa11.37□□□□□ -0.59
CLN6-210ENST00000635747 TRBV30A0A0K0K1B3 111 aa11.36□□□□□ -0.59
CLN6-210ENST00000635747 LINC01546A6NGU7 62 aa11.36□□□□□ -0.59
CLN6-210ENST00000635747 C10orf25Q5T742 122 aa11.36□□□□□ -0.59
CLN6-210ENST00000635747 SPINK6Q6UWN8 80 aa11.36□□□□□ -0.59
CLN6-210ENST00000635747 C18orf32Q8TCD1 76 aa11.36□□□□□ -0.59
CLN6-210ENST00000635747 HERVK_113P63121 156 aa11.35□□□□□ -0.59
CLN6-210ENST00000635747 ZC2HC1BQ5TFG8 222 aa11.35□□□□□ -0.59
CLN6-210ENST00000635747 ERASQ7Z444 233 aa11.35□□□□□ -0.59
CLN6-210ENST00000635747 PACRGQ96M98 296 aaPredicted RBP11.35□□□□□ -0.59
CLN6-210ENST00000635747 C6orf48Q9UBA6 75 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms